Os01g0182300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0182300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.68 | 0.586 | 7.7 | -1.45 | 0.634 | 0.957 | 1.46 | 2.99 | -0.221 | 5.65 | 66 | 1405 | -- | -- |
| 166.75 | 0.601 | 7.71 | -1.12 | 0.627 | 1.08 | 1.49 | -- | -0.185 | 5.78 | 63.02 | 1426 | -- | -- |
| 160.9 | 0.591 | 7.71 | -1.45 | 0.629 | 0.944 | -- | 2.97 | -0.228 | 5.57 | 66 | 1414 | -- | -- |
| 171.35 | 0.61 | 7.71 | -1.1 | 0.589 | 1.23 | -- | -- | -0.19 | 4.34 | 24.46 | 2459 | -- | -- |
| 166.85 | 0.602 | 7.71 | -1.3 | -- | 0.866 | -- | 2.73 | -0.212 | -- | 65.5 | 476 | -- | -- |
| 189.11 | 0.645 | 7.72 | -1.12 | 0.581 | -- | 1.36 | -- | -0.265 | 5.98 | -- | -- | -- | -- |
| 193.58 | 0.652 | 7.72 | -1.11 | 0.588 | -- | -- | -- | -0.27 | 5.82 | -- | -- | -- | -- |
| 177.1 | 0.62 | 7.72 | -1.1 | -- | 1.06 | -- | -- | -0.221 | -- | 56.35 | 405 | -- | -- |
| 204.22 | 0.666 | 7.69 | -- | 0.67 | 1.38 | -- | -- | -0.114 | 4.19 | 30.4 | 1106 | -- | -- |
| 211.53 | 0.68 | 7.73 | -1.09 | -- | -- | -- | -- | -0.257 | -- | -- | -- | -- | -- |
| 226.23 | 0.704 | 7.69 | -- | 0.571 | -- | -- | -- | -0.146 | 5.91 | -- | -- | -- | -- |
| 207.39 | 0.671 | 7.69 | -- | -- | 1.29 | -- | -- | -0.0845 | -- | 20.06 | 1910 | -- | -- |
| 243.15 | 0.728 | 7.7 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.66 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 19 |
| 14 | 154.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 16 |
| 21 | 154.62 | humidity | 90 | 1440 | < th | dose dependent | sin | 9 | NA |
| 70 | 155.28 | humidity | 70 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 80 | 155.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 85 | 155.45 | humidity | 60 | 1440 | > th | dose dependent | sin | 6 | NA |
| 102 | 155.61 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 133 | 155.99 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 150 | 156.14 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 168 | 156.32 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 182 | 156.42 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 186 | 156.44 | humidity | 70 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 189 | 156.46 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 254 | 156.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 370 | 157.36 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 9 |
| 380 | 157.41 | humidity | 70 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 461 | 157.75 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 478 | 157.81 | humidity | 70 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 489 | 157.85 | temperature | 25 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 518 | 157.99 | humidity | 80 | 1440 | < th | dose independent | sin | 5 | NA |
| 529 | 158.06 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 21 |
| 532 | 158.08 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 542 | 158.10 | humidity | 80 | 1440 | > th | dose independent | sin | 5 | NA |
| 613 | 158.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 627 | 158.36 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 629 | 158.36 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 656 | 158.42 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 664 | 158.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 704 | 158.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 725 | 158.56 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 747 | 158.60 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 748 | 158.60 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 767 | 158.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 774 | 158.63 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 810 | 158.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 855 | 158.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 923 | 158.88 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 924 | 158.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 948 | 158.91 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 982 | 158.95 | temperature | 25 | 14400 | > th | dose dependent | sin | 4 | NA |
| 990 | 158.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 997 | 158.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 13 |