Os01g0182200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Small basic membrane integral protein ZmSIP1-2.
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Os01g0182200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Small basic membrane integral protein ZmSIP1-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.22 | 0.221 | 13.2 | 0.876 | 0.205 | 0.367 | -0.934 | 1.4 | 0.367 | 18.4 | 0.1156 | 4525 | -- | -- |
| 21.32 | 0.215 | 13.2 | 1.04 | 0.2 | 0.357 | -0.962 | -- | 0.422 | 18.5 | 0.3112 | 25287 | -- | -- |
| 24.32 | 0.23 | 13.2 | 0.882 | 0.205 | 0.379 | -- | 1.48 | 0.365 | 18.9 | 0.02629 | 4423 | -- | -- |
| 23.25 | 0.225 | 13.2 | 0.745 | 0.188 | 0.511 | -- | -- | 0.344 | 19.4 | 0.7814 | 28016 | -- | -- |
| 26.48 | 0.24 | 13.2 | 0.88 | -- | 0.383 | -- | 1.42 | 0.365 | -- | 1.839e-06 | 4527 | -- | -- |
| 26.07 | 0.239 | 13.2 | 1.02 | 0.2 | -- | -1.01 | -- | 0.336 | 18.3 | -- | -- | -- | -- |
| 28.49 | 0.25 | 13.2 | 1.03 | 0.198 | -- | -- | -- | 0.332 | 19 | -- | -- | -- | -- |
| 24.95 | 0.233 | 13.2 | 0.67 | -- | 0.547 | -- | -- | 0.382 | -- | 0.6843 | 28110 | -- | -- |
| 29.66 | 0.254 | 13.2 | -- | 0.185 | 0.714 | -- | -- | 0.382 | 19.5 | 1.115 | 47520 | -- | -- |
| 30.54 | 0.258 | 13.2 | 1.02 | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
| 56.28 | 0.351 | 13.2 | -- | 0.187 | -- | -- | -- | 0.217 | 19.3 | -- | -- | -- | -- |
| 31.48 | 0.261 | 13.2 | -- | -- | 0.714 | -- | -- | 0.38 | -- | 1.21 | 47520 | -- | -- |
| 58.13 | 0.356 | 13.2 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.16 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 2 | 19.20 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 15 | 19.42 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 16 | 19.42 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 22 | 19.45 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 100 | 19.70 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 117 | 19.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 284 | 20.01 | wind | 5.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 358 | 20.12 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 400 | 20.17 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 469 | 20.25 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 490 | 20.27 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 556 | 20.37 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 618 | 20.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 634 | 20.47 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 14 |
| 655 | 20.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 665 | 20.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 686 | 20.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 696 | 20.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 697 | 20.56 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 698 | 20.56 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 707 | 20.57 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 741 | 20.61 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 777 | 20.64 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 794 | 20.65 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 880 | 20.70 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 892 | 20.71 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 926 | 20.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 935 | 20.73 | humidity | 70.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 937 | 20.73 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 967 | 20.73 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 977 | 20.74 | humidity | 70.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 983 | 20.74 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 1000 | 20.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |