BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0182200 Os01g0182200|AK109424
(246 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G04090.1 | chr3:1072340-1074031 REVERSE LENGTH=241 186 1e-47
AT5G18290.1 | chr5:6055198-6056407 REVERSE LENGTH=244 175 2e-44
AT3G56950.2 | chr3:21078411-21079644 REVERSE LENGTH=261 97 6e-21
AT3G61430.1 | chr3:22733657-22735113 FORWARD LENGTH=287 59 3e-09
AT1G73190.1 | chr1:27522155-27523171 FORWARD LENGTH=269 55 3e-08
AT1G17810.1 | chr1:6130209-6131442 FORWARD LENGTH=268 55 4e-08
AT2G37180.1 | chr2:15617779-15618937 FORWARD LENGTH=286 54 6e-08
AT2G37170.1 | chr2:15613624-15614791 REVERSE LENGTH=286 54 1e-07
AT2G16850.1 | chr2:7301647-7303180 FORWARD LENGTH=279 53 1e-07
AT2G39010.1 | chr2:16291564-16293746 FORWARD LENGTH=290 53 1e-07
AT3G53420.1 | chr3:19803906-19805454 REVERSE LENGTH=288 53 2e-07
AT4G00430.1 | chr4:186143-187531 REVERSE LENGTH=288 53 2e-07
AT1G01620.1 | chr1:225986-227176 REVERSE LENGTH=287 52 2e-07
AT2G25810.1 | chr2:11012658-11013906 FORWARD LENGTH=250 52 3e-07
AT4G01470.1 | chr4:625092-625850 REVERSE LENGTH=253 52 4e-07
AT3G54820.1 | chr3:20302117-20303738 FORWARD LENGTH=287 51 5e-07
AT4G23400.1 | chr4:12220792-12222155 FORWARD LENGTH=288 51 6e-07
AT5G47450.1 | chr5:19248509-19249466 REVERSE LENGTH=251 50 1e-06
AT4G17340.1 | chr4:9699318-9700250 FORWARD LENGTH=251 50 1e-06
AT4G35100.1 | chr4:16708672-16709958 FORWARD LENGTH=281 49 2e-06
AT5G60660.1 | chr5:24375673-24376939 REVERSE LENGTH=292 48 6e-06
AT3G26520.1 | chr3:9722770-9723703 REVERSE LENGTH=254 47 7e-06
>AT3G04090.1 | chr3:1072340-1074031 REVERSE LENGTH=241
Length = 240
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 135/219 (61%), Gaps = 6/219 (2%)
Query: 16 TFLWVLCVSTLGASTAAVTSYLRIHEGIHYXXXXXXXXXXXXXXXXXXXCDALGGASFNP 75
TF WV+ +T G TAA+ S + I + G ASFNP
Sbjct: 15 TFSWVVLSATFGIQTAAIISAGD-FQAITWAPLVILTSLIFVYVSIFTVI--FGSASFNP 71
Query: 76 TALAAFHAAGLSSPRHSSLFPLALRFPXXXXXXXXXXXXISELMPEQYKHMLGGPSLKVD 135
T AAF+ AG+ +LF LA+R P I E +PE+YKHM+GGPSL+VD
Sbjct: 72 TGSAAFYVAGVPG---DTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVD 128
Query: 136 LHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPAN 195
+HTGA AE +L+F IT AVL II++GPR + KT++L+++T+ V+ G+ YTGP+MNPA
Sbjct: 129 VHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAI 188
Query: 196 AFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
AFGWAY+ + HNTW+ YVYWI FVGA+ AA +FR++F
Sbjct: 189 AFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIF 227
>AT5G18290.1 | chr5:6055198-6056407 REVERSE LENGTH=244
Length = 243
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 131/220 (59%), Gaps = 4/220 (1%)
Query: 16 TFLWVLCVSTLGASTAAVTSYLRIHEGIHYXXXXXXXXXXXXXXXXXXXCDALGGASFNP 75
TFLWV+ +T G TAA+ S + H + LGGASFNP
Sbjct: 14 TFLWVILSATFGIQTAAIVSAVGFHGITWAPLVISTLVVFVSISIFTVIGNVLGGASFNP 73
Query: 76 TALAAFHAAGLSSPRHSSLFPLALRFPXXXXXXXXXXXXISELMPEQYKHMLGG-PSLKV 134
AAF+ AG+SS SLF LA+R P I E++PE+YK +GG PSL+
Sbjct: 74 CGNAAFYTAGVSS---DSLFSLAIRSPAQAIGAAGGAITIMEMIPEKYKTRIGGKPSLQF 130
Query: 135 DLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPA 194
H GA +E+VL+F +T VL II++GPR + KT++L+++TV + + G+ +T P MNPA
Sbjct: 131 GAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFVVGSKFTRPFMNPA 190
Query: 195 NAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
AFGWAY+ HNTW+ FYVYWI + GA+L+A +FR +F
Sbjct: 191 IAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIF 230
>AT3G56950.2 | chr3:21078411-21079644 REVERSE LENGTH=261
Length = 260
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 66 DALGGASFNP-TALAAFHAAGLSSPRHSSLFPLALRFPXXXXXXXXXXXXISELMPEQYK 124
A G +NP TALAA G+S S +F + +R P I + PE K
Sbjct: 61 QATKGGLYNPLTALAA----GVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGK 116
Query: 125 HMLGGPSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGA 184
GP L V +H GA E +LTF I L + + K P + +KTW+ S++ + L + G+
Sbjct: 117 ----GPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGS 172
Query: 185 AYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
TG MNPA GWAY H T E VYW+ P +LA W F+ VF
Sbjct: 173 DLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVF 222
>AT3G61430.1 | chr3:22733657-22735113 FORWARD LENGTH=287
Length = 286
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLHT---GAAAELVLTFVITLAVLWIIVKGPRN------P 165
+ P+QY+ + GG + +T G AE++ TFV+ V + RN P
Sbjct: 150 VKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV-FSATDAKRNARDSHVP 208
Query: 166 IVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVL 225
I+ + + + L TG +NPA + G A + N+ ++W+ +V+W+ PF+GA L
Sbjct: 209 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAAL 268
Query: 226 AA 227
AA
Sbjct: 269 AA 270
>AT1G73190.1 | chr1:27522155-27523171 FORWARD LENGTH=269
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 139 GAAAELVLTFVITLAVLWIIVKGPRNP------IVKTWMLSISTVCLVLTGAAYTGPSMN 192
GA LVL ++T +++++ +P I+ + + +L G ++G SMN
Sbjct: 148 GAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMN 207
Query: 193 PANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFR 231
PA AFG A V R W ++YW+ PF+G+ LAA ++
Sbjct: 208 PARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYE 243
>AT1G17810.1 | chr1:6130209-6131442 FORWARD LENGTH=268
Length = 267
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 135 DLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTV--CLVLTGAAYTGPSMN 192
+LH G E++LTF + V + R I L+I + +L G + G SMN
Sbjct: 149 ELH-GLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMN 207
Query: 193 PANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFR 231
PA AFG A V R W ++YW+ PF+G LAA ++
Sbjct: 208 PARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYE 243
>AT2G37180.1 | chr2:15617779-15618937 FORWARD LENGTH=286
Length = 285
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWIIVKGPRN------P 165
+ Y + GG + D + TG AAE++ TFV+ V + RN P
Sbjct: 141 VKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTV-FSATDPKRNARDSHVP 199
Query: 166 IVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVL 225
++ + + + L TG +NPA +FG A + N+ W+ +++W+ PF+GA +
Sbjct: 200 VLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATI 259
Query: 226 AAW 228
AA+
Sbjct: 260 AAF 262
>AT2G37170.1 | chr2:15613624-15614791 REVERSE LENGTH=286
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWIIVKGPRN------P 165
+ Y GG + D + TG AAE++ TFV+ V + RN P
Sbjct: 141 VKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTV-FSATDPKRNARDSHVP 199
Query: 166 IVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVL 225
++ + + + L TG +NPA +FG A + N+ W+ +++W+ PF+GA +
Sbjct: 200 VLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAI 259
Query: 226 AAW 228
AA+
Sbjct: 260 AAF 262
>AT2G16850.1 | chr2:7301647-7303180 FORWARD LENGTH=279
Length = 278
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH-TGAA--AELVLTFVITLAVLWII-----VKGPRNPI 166
+ M YK + GG + D + TG A AE++ TFV+ V + P+
Sbjct: 134 VKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV 193
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA +FG A + N W+ +++W+ PFVGA+ A
Sbjct: 194 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAA 253
Query: 227 A----WVFRA 232
A ++ RA
Sbjct: 254 AAYHQYILRA 263
>AT2G39010.1 | chr2:16291564-16293746 FORWARD LENGTH=290
Length = 289
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 123 YKHMLGGPSLKVD---LHTGAAAELVLTFVITLAVLWIIVKGPRN------PIVKTWMLS 173
Y GG ++ D + G AE++ TFV+ V + RN P++ +
Sbjct: 150 YNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTV-FSATDPKRNARDSHIPVLAPLPIG 208
Query: 174 ISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAW 228
S + L TG +NPA +FG A + N W+ +++W+ PFVGA +AA+
Sbjct: 209 FSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAF 263
>AT3G53420.1 | chr3:19803906-19805454 REVERSE LENGTH=288
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWII--VKGPRN---PI 166
+ Y GG + D + TG AAE++ TFV+ V + R+ P+
Sbjct: 143 VKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV 202
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA +FG A + N+ W+ +++W+ PF+GA +A
Sbjct: 203 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIA 262
Query: 227 AW 228
A+
Sbjct: 263 AF 264
>AT4G00430.1 | chr4:186143-187531 REVERSE LENGTH=288
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLHT---GAAAELVLTFVITLAVLWII--VKGPRN---PI 166
+ P Y+ + GG + +T G AE++ TFV+ V + R+ PI
Sbjct: 151 VKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 210
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA + G A + N+ ++W+ +++W+ PF+GA LA
Sbjct: 211 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALA 270
Query: 227 A 227
A
Sbjct: 271 A 271
>AT1G01620.1 | chr1:225986-227176 REVERSE LENGTH=287
Length = 286
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLHT---GAAAELVLTFVITLAVLWII--VKGPRN---PI 166
+ P Y+ + GG + +T G AE++ TFV+ V + R+ PI
Sbjct: 150 VKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 209
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA + G A + N+ + W+ +++W+ PF+GA LA
Sbjct: 210 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALA 269
Query: 227 A 227
A
Sbjct: 270 A 270
>AT2G25810.1 | chr2:11012658-11013906 FORWARD LENGTH=250
Length = 249
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 13/98 (13%)
Query: 143 ELVLTFVITLAVLWIIVKGPRN------PIVKTWMLSISTVCLVLTGAAYTGPSMNPANA 196
E++LTF + V IV + P++ +++ + +L G A++G SMNPA +
Sbjct: 142 EIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGAN----ILAGGAFSGASMNPARS 197
Query: 197 FGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
FG A V+ W +VYW+ P +G LA +++ V
Sbjct: 198 FGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232
>AT4G01470.1 | chr4:625092-625850 REVERSE LENGTH=253
Length = 252
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 143 ELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTV--CLVLTGAAYTGPSMNPANAFGWA 200
E+V+TF + V V + I L+I + +L G A+ G SMNPA +FG A
Sbjct: 148 EIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPA 207
Query: 201 YVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
V+ W +VYW+ PF+GA +AA V+ +F
Sbjct: 208 VVSW---IWTNHWVYWVGPFIGAAIAAIVYDTIF 238
>AT3G54820.1 | chr3:20302117-20303738 FORWARD LENGTH=287
Length = 286
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 122 QYKHMLGGPSLKVDLHTGAAAELVLTFVITLAVLWII-----VKGPRNPIVKTWMLSIST 176
+Y G S + TG AAE++ TFV+ V + P++ + +
Sbjct: 152 RYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAV 211
Query: 177 VCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAW 228
+ L TG +NPA + G A + N+ W+ +++W+ PF GA +AA+
Sbjct: 212 FIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAF 263
>AT4G23400.1 | chr4:12220792-12222155 FORWARD LENGTH=288
Length = 287
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLHT---GAAAELVLTFVITLAVLWII--VKGPRN---PI 166
+ P Y+ GG ++ +T G AE+V TFV+ V + R+ PI
Sbjct: 151 VKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPI 210
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA + G A + N+ + W+ +++W+ PF+GA LA
Sbjct: 211 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALA 270
Query: 227 A 227
A
Sbjct: 271 A 271
>AT5G47450.1 | chr5:19248509-19249466 REVERSE LENGTH=251
Length = 250
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 130 PSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCL-------VLT 182
P+ V GA +V+ V+T A+++ + +P K + +I+ + + +L
Sbjct: 129 PTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADP-KKGSLGTIAPIAIGFIVGANILA 187
Query: 183 GAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
++G SMNPA +FG A V+ Q ++YW+ P VG LA ++ VF
Sbjct: 188 AGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIYGDVF 236
>AT4G17340.1 | chr4:9699318-9700250 FORWARD LENGTH=251
Length = 250
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 130 PSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCL-------VLT 182
P+ V GA +V+ V+T A+++ + +P K + +I+ + + +L
Sbjct: 129 PTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADP-KKGSLGTIAPIAIGFIVGANILA 187
Query: 183 GAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
++G SMNPA +FG A V+ + Q ++YW+ P VG LA ++ VF
Sbjct: 188 AGPFSGGSMNPARSFGPAVVSGD---FSQIWIYWVGPLVGGALAGLIYGDVF 236
>AT4G35100.1 | chr4:16708672-16709958 FORWARD LENGTH=281
Length = 280
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWII--VKGPRN---PI 166
+ M Y + GG + D + T AE++ TFV+ V + R+ P+
Sbjct: 136 VKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPV 195
Query: 167 VKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLA 226
+ + + + L TG +NPA +FG A + N W+ +++W+ PF+GA+ A
Sbjct: 196 LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAA 255
Query: 227 A----WVFRA 232
A ++ RA
Sbjct: 256 AAYHQYILRA 265
>AT5G60660.1 | chr5:24375673-24376939 REVERSE LENGTH=292
Length = 291
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 115 ISELMPEQYKHMLGGPSLKVDLH---TGAAAELVLTFVITLAVLWIIVKGPRN------P 165
+ Y GG + D + TG AE++ TFV+ V + RN P
Sbjct: 143 VKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTV-FSATDPKRNARDSHVP 201
Query: 166 IVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVL 225
++ + + + L TG +NPA +FG A + N W+ +++W+ P +GA
Sbjct: 202 VLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAA 261
Query: 226 AAW 228
AA+
Sbjct: 262 AAF 264
>AT3G26520.1 | chr3:9722770-9723703 REVERSE LENGTH=254
Length = 253
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 130 PSLKVDLHTGAAAELVLTFVITLAVLWIIVK---GPRN-------PIVKTWMLSISTVCL 179
P+ + G+ LV V+T +++ + P+N PI +++ +
Sbjct: 132 PAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGAN---- 187
Query: 180 VLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
+L G A++G SMNPA AFG A V+ TW +VYW P +G LA ++ VF
Sbjct: 188 ILAGGAFSGASMNPAVAFGPAVVS---WTWTNHWVYWAGPLIGGGLAGIIYDFVF 239
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.137 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,042,469
Number of extensions: 129402
Number of successful extensions: 408
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 398
Number of HSP's successfully gapped: 23
Length of query: 246
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 150
Effective length of database: 8,474,633
Effective search space: 1271194950
Effective search space used: 1271194950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)