Os01g0176500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0176500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.05 | 0.534 | 3.16 | -0.974 | 0.328 | 0.696 | -0.136 | -3.18 | 0.206 | 7.78 | 26.34 | 1304 | -- | -- |
| 131.61 | 0.534 | 3.07 | -0.225 | 0.297 | 0.371 | -0.132 | -- | 0.353 | 7.52 | 25.6 | 1341 | -- | -- |
| 129.1 | 0.529 | 3.16 | -0.975 | 0.328 | 0.695 | -- | -3.18 | 0.209 | 7.76 | 26.38 | 1304 | -- | -- |
| 131.55 | 0.534 | 3.07 | -0.18 | 0.315 | 0.365 | -- | -- | 0.362 | 7.73 | 25.7 | 1319 | -- | -- |
| 134.85 | 0.541 | 3.16 | -0.868 | -- | 0.635 | -- | -2.63 | 0.22 | -- | 25.97 | 1327 | -- | -- |
| 137.06 | 0.549 | 3.06 | -0.0637 | 0.322 | -- | -0.0882 | -- | 0.392 | 7.14 | -- | -- | -- | -- |
| 137.08 | 0.548 | 3.06 | -0.0655 | 0.322 | -- | -- | -- | 0.392 | 7.12 | -- | -- | -- | -- |
| 136.88 | 0.545 | 3.08 | -0.187 | -- | 0.366 | -- | -- | 0.36 | -- | 25.41 | 1357 | -- | -- |
| 132.4 | 0.536 | 3.06 | -- | 0.318 | 0.324 | -- | -- | 0.396 | 7.7 | 26.3 | 1310 | -- | -- |
| 142.56 | 0.558 | 3.07 | -0.0594 | -- | -- | -- | -- | 0.398 | -- | -- | -- | -- | -- |
| 137.19 | 0.548 | 3.06 | -- | 0.322 | -- | -- | -- | 0.399 | 7.14 | -- | -- | -- | -- |
| 137.71 | 0.547 | 3.07 | -- | -- | 0.32 | -- | -- | 0.399 | -- | 26.2 | 1351 | -- | -- |
| 142.65 | 0.557 | 3.07 | -- | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.92 | radiation | 20.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 2 | 122.05 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 3 | 122.06 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 8 | 122.17 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 10 | 122.17 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 11 | 122.20 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 14 | 122.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 16 | 122.22 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 17 | 122.22 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 19 | 122.22 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 21 | 122.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 23 | 122.22 | radiation | 1.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 24 | 122.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 25 | 122.22 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 26 | 122.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 27 | 122.25 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 29 | 122.25 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 30 | 122.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 34 | 122.33 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 35 | 122.34 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 37 | 122.37 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 38 | 122.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 41 | 122.38 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 44 | 122.38 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 45 | 122.38 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 55 | 122.54 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 57 | 122.58 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 60 | 122.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 111 | 124.21 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 15 |
| 113 | 124.45 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 120 | 124.89 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 121 | 124.95 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 23 |
| 122 | 124.95 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 137 | 125.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 138 | 126.02 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 146 | 126.31 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 148 | 126.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 150 | 126.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 165 | 127.11 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 169 | 127.17 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 197 | 127.32 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 198 | 127.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 12 |
| 206 | 127.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 211 | 127.34 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 238 | 127.38 | temperature | 30.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 243 | 127.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 256 | 127.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 14 |
| 261 | 127.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 16 |
| 278 | 127.38 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 280 | 127.38 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 281 | 127.39 | temperature | 30.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 309 | 127.39 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 311 | 127.40 | temperature | 30.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 351 | 127.40 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 377 | 127.42 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 541 | 127.44 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 678 | 127.46 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 707 | 127.49 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 716 | 127.53 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 730 | 127.59 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 810 | 127.71 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 817 | 127.72 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 842 | 127.75 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 879 | 127.79 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 954 | 127.86 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 18 | NA |