Os01g0172600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0172600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.12 | 0.616 | 9.44 | -4.05 | 2.42 | 1.55 | 0.848 | -7.52 | -0.858 | 7.6 | 26.2 | 3307 | -- | -- |
| 183.74 | 0.631 | 9.24 | -3.21 | 2.4 | 1.82 | 1.57 | -- | -0.644 | 7.49 | 20.4 | 23396 | -- | -- |
| 173.96 | 0.614 | 9.44 | -4.04 | 2.43 | 1.57 | -- | -7.69 | -0.849 | 7.63 | 26.3 | 3369 | -- | -- |
| 182.28 | 0.629 | 9.28 | -3.31 | 2.24 | 1.97 | -- | -- | -0.719 | 7.43 | 19 | 26453 | -- | -- |
| 466.22 | 1.01 | 9.47 | -3.88 | -- | 1.62 | -- | -8.03 | -0.639 | -- | 26.6 | 4352 | -- | -- |
| 241.59 | 0.729 | 9.11 | -1.41 | 2.31 | -- | 1.2 | -- | -0.00164 | 7.43 | -- | -- | -- | -- |
| 245.52 | 0.734 | 9.11 | -1.38 | 2.31 | -- | -- | -- | -0.00351 | 7.45 | -- | -- | -- | -- |
| 466.66 | 1.01 | 9.33 | -3.57 | -- | 2.23 | -- | -- | -0.683 | -- | 19.2 | 26037 | -- | -- |
| 283.2 | 0.784 | 9.04 | -- | 2.3 | -0.534 | -- | -- | 0.325 | 7.45 | 21.05 | 47520 | -- | -- |
| 529.65 | 1.08 | 9.16 | -1.35 | -- | -- | -- | -- | 0.0334 | -- | -- | -- | -- | -- |
| 296.05 | 0.805 | 9.08 | -- | 2.3 | -- | -- | -- | 0.151 | 7.49 | -- | -- | -- | -- |
| 494.8 | 1.04 | 9.16 | -- | -- | -1.19 | -- | -- | 0.0543 | -- | 35.2 | 47520 | -- | -- |
| 577.62 | 1.12 | 9.13 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 2 | 163.77 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 8 |
| 3 | 164.01 | humidity | 90 | 43200 | > th | dose dependent | rect. | 2 | 10 |
| 8 | 164.30 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 10 | 164.31 | radiation | 20 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 12 | 164.31 | radiation | 20 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 17 | 164.32 | humidity | 90 | 43200 | > th | dose dependent | sin | 4 | NA |
| 28 | 164.57 | radiation | 40 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 29 | 164.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 32 | 164.62 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 36 | 164.65 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 41 | 164.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 61 | 164.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 76 | 165.01 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 111 | 165.15 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 138 | 165.23 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 141 | 165.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 146 | 165.28 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 172 | 165.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 173 | 165.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 195 | 165.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 196 | 165.45 | radiation | 40 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 217 | 165.56 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 243 | 165.71 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 262 | 165.76 | radiation | 40 | 43200 | > th | dose dependent | sin | 10 | NA |
| 291 | 165.86 | radiation | 30 | 43200 | < th | dose independent | sin | 10 | NA |
| 301 | 165.92 | radiation | 10 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 455 | 166.36 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 477 | 166.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 516 | 166.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 531 | 166.66 | radiation | 1 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 546 | 166.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 557 | 166.75 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 643 | 166.97 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 647 | 167.00 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 755 | 167.26 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 756 | 167.26 | temperature | 20 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 791 | 167.35 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 836 | 167.44 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 880 | 167.55 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 892 | 167.59 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 903 | 167.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 10 |
| 933 | 167.68 | radiation | 40 | 43200 | < th | dose independent | rect. | 8 | 14 |