Os01g0169900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1421 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0169900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1421 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.98 | 0.21 | 11.6 | 1.72 | 0.387 | -0.535 | -0.44 | 1.72 | 0.534 | 1.74 | 21.64 | 1620 | -- | -- |
| 21.71 | 0.217 | 11.6 | 1.45 | 0.407 | -0.679 | -0.485 | -- | 0.517 | 2.11 | 13.72 | 8811 | -- | -- |
| 20.72 | 0.212 | 11.6 | 1.73 | 0.384 | -0.541 | -- | 1.73 | 0.534 | 1.52 | 21.73 | 1655 | -- | -- |
| 22.28 | 0.22 | 11.6 | 1.4 | 0.404 | -0.625 | -- | -- | 0.484 | 1.8 | 12.85 | 8908 | -- | -- |
| 22.63 | 0.223 | 11.6 | 1.49 | -- | -0.821 | -- | 1.66 | 0.496 | -- | 21.73 | 1655 | -- | -- |
| 27.84 | 0.247 | 11.6 | 1.05 | 0.387 | -- | -0.466 | -- | 0.292 | 1.98 | -- | -- | -- | -- |
| 28.65 | 0.251 | 11.6 | 1.07 | 0.386 | -- | -- | -- | 0.295 | 1.81 | -- | -- | -- | -- |
| 24.66 | 0.232 | 11.6 | 1.22 | -- | -0.74 | -- | -- | 0.422 | -- | 20.6 | 1674 | -- | -- |
| 44.02 | 0.309 | 11.7 | -- | 0.379 | 0.586 | -- | -- | -0.0158 | 1.86 | 16.51 | 47520 | -- | -- |
| 37.68 | 0.287 | 11.6 | 1.08 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 58.55 | 0.358 | 11.7 | -- | 0.405 | -- | -- | -- | 0.177 | 1.88 | -- | -- | -- | -- |
| 52.67 | 0.338 | 11.7 | -- | -- | 0.61 | -- | -- | -0.0177 | -- | 16.7 | 47520 | -- | -- |
| 68.5 | 0.386 | 11.7 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.14 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 2 | 19.18 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 22 | 19.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 37 | 19.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 39 | 19.75 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 44 | 19.79 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 45 | 19.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 46 | 19.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 47 | 19.80 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 72 | 19.82 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 73 | 19.83 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 78 | 19.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 85 | 19.89 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 88 | 19.90 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 89 | 19.90 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 15 |
| 93 | 19.91 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 98 | 19.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 10 |
| 100 | 19.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 103 | 19.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 116 | 19.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 129 | 19.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 139 | 19.97 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 148 | 19.97 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 149 | 19.97 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 188 | 19.99 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 195 | 20.00 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 9 |
| 204 | 20.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 209 | 20.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 212 | 20.01 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 7 |
| 217 | 20.02 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 247 | 20.04 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 250 | 20.04 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 260 | 20.05 | temperature | 25.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 268 | 20.05 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 324 | 20.08 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 455 | 20.16 | temperature | 25.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 514 | 20.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 523 | 20.19 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 524 | 20.19 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 553 | 20.20 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 583 | 20.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 613 | 20.23 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 634 | 20.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 656 | 20.25 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 668 | 20.26 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 726 | 20.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 752 | 20.29 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 850 | 20.32 | radiation | 1.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 858 | 20.32 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 987 | 20.35 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 22 |