Os01g0167800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1723 domain containing protein.
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Os01g0167800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1723 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.18 | 0.532 | 5.04 | 0.555 | 0.729 | 1.7 | 0.268 | -0.737 | -0.11 | 9.9 | 19.58 | 12 | -- | -- |
| 128.63 | 0.528 | 5.02 | 0.686 | 0.729 | 1.67 | 0.118 | -- | -0.073 | 9.88 | 19.49 | 10 | -- | -- |
| 128.41 | 0.528 | 5.03 | 0.596 | 0.728 | 1.7 | -- | -0.538 | -0.102 | 9.84 | 19.6 | 12 | -- | -- |
| 128.69 | 0.528 | 5.02 | 0.689 | 0.728 | 1.68 | -- | -- | -0.0738 | 9.86 | 19.5 | 10 | -- | -- |
| 156.91 | 0.587 | 5.06 | 0.518 | -- | 2.13 | -- | -0.488 | -0.151 | -- | 18.25 | 5 | -- | -- |
| 168.94 | 0.609 | 4.96 | 1.03 | 1.11 | -- | 0.413 | -- | 0.212 | 11.9 | -- | -- | -- | -- |
| 169.68 | 0.61 | 4.96 | 1.05 | 1.11 | -- | -- | -- | 0.214 | 11.9 | -- | -- | -- | -- |
| 156.84 | 0.583 | 5.05 | 0.591 | -- | 2.1 | -- | -- | -0.132 | -- | 18.1 | 3 | -- | -- |
| 138.86 | 0.549 | 5.05 | -- | 0.701 | 2.3 | -- | -- | -0.192 | 9.48 | 15.2 | 12 | -- | -- |
| 247.32 | 0.735 | 4.98 | 1.01 | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
| 198.58 | 0.659 | 4.98 | -- | 1.1 | -- | -- | -- | 0.0973 | 11.9 | -- | -- | -- | -- |
| 165.2 | 0.599 | 5.07 | -- | -- | 2.58 | -- | -- | -0.218 | -- | 15.26 | 2 | -- | -- |
| 274.41 | 0.773 | 5 | -- | -- | -- | -- | -- | 0.0867 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 2 | 118.40 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 11 | 120.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 13 |
| 15 | 120.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 18 | 120.93 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 19 | 120.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 26 | 121.21 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 32 | 121.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 64 | 122.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 8 |
| 306 | 125.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 338 | 125.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 424 | 126.74 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 453 | 126.99 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 471 | 127.17 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 477 | 127.20 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 12 |
| 492 | 127.29 | temperature | 20 | 720 | > th | dose independent | sin | 4 | NA |
| 505 | 127.38 | temperature | 20 | 720 | < th | dose independent | sin | 4 | NA |
| 542 | 127.60 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 13 |
| 595 | 127.97 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 17 |
| 645 | 128.29 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 663 | 128.41 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 16 |
| 842 | 129.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 904 | 129.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 930 | 129.79 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 15 |
| 960 | 129.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 984 | 130.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |