BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0167800 Os01g0167800|AK101983
(599 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341 271 6e-73
AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668 204 1e-52
AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510 192 3e-49
AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479 171 1e-42
AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697 75 7e-14
AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667 75 1e-13
AT1G50830.1 | chr1:18835559-18837865 REVERSE LENGTH=769 72 1e-12
AT5G18510.1 | chr5:6141778-6143886 REVERSE LENGTH=703 65 7e-11
AT1G50790.1 | chr1:18824050-18826488 REVERSE LENGTH=813 60 3e-09
>AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341
Length = 1340
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 218/384 (56%), Gaps = 8/384 (2%)
Query: 51 MGLANICRAGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAV 110
GL + + +D AL++ALV+RWRPETHTFH+P GEIT+TLQDV ++LGL + G AV
Sbjct: 67 FGLYGVYKVAFIQLDYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAV 126
Query: 111 TVNPTEPQNELVERYLGKAP-PPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYIL 169
T + +L E LG P P D + ++W+R F N P D DE T+K H RA++L
Sbjct: 127 TGSTKYNWADLCEDLLGHRPGPKDLHGSHVSLAWLRENFRNLPADPDEVTLKCHTRAFVL 186
Query: 170 SLISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGSNL 229
+L+SG L+ D S PL+ D + + SWGSATLA LYR +C A +R S +
Sbjct: 187 ALMSGFLYGDKSKHDVALTFLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTV--STI 244
Query: 230 TGCLLLLQFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAPARC 289
G L+LLQ W+WE +GRP +K + + D +G RW + + + P
Sbjct: 245 CGPLVLLQLWAWERLHVGRPGRLKDVGASYMDGIDGPLPDPLGCRWRASL-SHKENPRGG 303
Query: 290 YEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHLWLTRAPLLYFFMVEIYMPE 349
+ + ++FD D+QV+W PY + + ++ L IC ++W T APL+ F +VE + P+
Sbjct: 304 LDFYRDQFDQQKDEQVIWQPYTPDLLAKIPL--ICVSGENIWRTVAPLICFDVVEWHRPD 361
Query: 350 RVMRQFGLHQVCPPPLRDTSAELHWCRRGRVHNDWAQKHKSFVDMWEAKEQDVVMEDRPY 409
RV+RQFGLHQ P P + A +RG+ DW+ +H + +WEA+ VV +
Sbjct: 362 RVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEARVSSVVSGEPEC 421
Query: 410 DHSSYMD-YLRWYRRSTRIRLCTP 432
Y D Y+ WYRR TR R+ +P
Sbjct: 422 SPMDYNDPYMEWYRRITR-RIISP 444
>AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668
Length = 667
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 204/390 (52%), Gaps = 37/390 (9%)
Query: 52 GLANICRAGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAVT 111
G + R S+D L+SALV+RWR ET+TFH GE+T+TL+D+A++LGL I G V
Sbjct: 61 GFGFLRRIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDGKPVI 120
Query: 112 VNPTEPQNELVERYLGKAPPPDRPRPGL-RVSWVRAEFNNCPEDADEETIKQHARAYILS 170
+ + ERYLGK+P + G+ ++SW++ F+ CP+DA E +++ RAY+L
Sbjct: 121 GLTYTTCSAVCERYLGKSPASNSASGGMVKLSWLKDNFSECPDDASFEEVERRTRAYLLY 180
Query: 171 LISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGSNLT 230
L+ +F +G+ PL D ++ G+++WG+A LA+LYRA+ +A + S +
Sbjct: 181 LVGSTIFSTTTGNKVPVMYLPLFEDFDDAGTFAWGAAALAFLYRALGNASVKSQ--STIC 238
Query: 231 GCLLLLQFWSWEHFPIGRPDL----VKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAP 286
GCL LLQ WS+ H IGRP L + ++P V + + +++ PT
Sbjct: 239 GCLTLLQCWSYYHLNIGRPKLNREPIHDQFPFVLKWKGKQNGPTAN-------------- 284
Query: 287 ARCYEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHLWLTRAPLLYFFMVEIY 346
R + D++ VVW PY E M ++ + L ++ L+ F E +
Sbjct: 285 -RDVVFYRKALDVMKPTDVVWLPY--ENMNGGDMSDRMRKSLLLGRSKTMLISFDKAERH 341
Query: 347 MPERVMRQFGLHQVCPPPLRDTSAELHWCRRGRVHN---DWAQKHKSFVDMWEAKEQDVV 403
+P+R +QF L Q P ++ W R+ R + D + K +S + WE + +++V
Sbjct: 342 LPDRCRKQFDLFQDIPADVQ------RWVRKSRGVDGGVDLSNKMESELSEWEMRWENIV 395
Query: 404 MED-RPYDHSSYMDYLRWYRRSTRIRLCTP 432
+D + D + DY+RWY TR + P
Sbjct: 396 PDDVQGVDEA---DYMRWYLGITRKIVGRP 422
>AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510
Length = 509
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 192/385 (49%), Gaps = 37/385 (9%)
Query: 52 GLANICRAGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAVT 111
G + G S++ +L+SALV+RWR ET+TFH+P GE+TITL +VA++LGL I G +
Sbjct: 59 GFGYFRKIGPMSLNNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDPIV 118
Query: 112 VNPT--EPQNELVERYLGKAPPPDRPRPG---LRVSWVRAEFNNCPEDADEETIKQHARA 166
+ E ++ R LGK P ++++W++ F+ CPEDA + +K H RA
Sbjct: 119 GSKVGDEVAMDMCGRLLGKLPSAANKEVNCSRVKLNWLKRTFSECPEDASFDVVKCHTRA 178
Query: 167 YILSLISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDG 226
Y+L LI +F GD + PL D + G Y+WG+A LA LYRA+ +A +
Sbjct: 179 YLLYLIGSTIFATTDGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQ-- 236
Query: 227 SNLTGCLLLLQFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAP 286
SN+ GCL LLQ WS+ H IGRP+ + +P + L W G +R
Sbjct: 237 SNICGCLTLLQCWSYFHLDIGRPEKSEACFP-------------LALLW-KGKGSRSKTD 282
Query: 287 ARCYEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHLWLTRAPLLYFFMVEIY 346
Y E D L ++ WCPY ER + L + P L ++ L+ F +E++
Sbjct: 283 LSEYRR---ELDDLDPSKITWCPY--ERFENL-IPPHIKAKLILGRSKTTLVCFEKIELH 336
Query: 347 MPERVMRQFGLHQVCPPPLRDTSAELHWCRRGRVHNDWAQKHKSFVDMWEAKEQDVVMED 406
P+R +RQFG Q P PL+ + R+ R +D + W + +V D
Sbjct: 337 FPDRCLRQFGKRQ--PIPLKVKRRD----RKNRRLDDLDTSMSLACEEWAERGDHIV--D 388
Query: 407 RPYDHSSYMD--YLRWYRRSTRIRL 429
P + D Y+ WY R + +L
Sbjct: 389 SPGGGNVVDDGAYMEWYARISITKL 413
>AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479
Length = 478
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 40/337 (11%)
Query: 59 AGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAV--TVNPTE 116
G S++ +L+SALV+RWR ET+TFH PCGE+TITL +V++ILGL + G V E
Sbjct: 57 VGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDE 116
Query: 117 PQNELVERYLGKAPPPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYILSLISGLL 176
+++ R LGK P + + W++ F CP+ A + I+ H RAY++ ++ +
Sbjct: 117 DPSQVCLRLLGKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHTRAYLIYIVGSTI 176
Query: 177 FPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGSNLTGCLLLL 236
F + L D E G Y+WG+A LA+LYR + +A +R S + GCL LL
Sbjct: 177 FATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQ--SIIGGCLTLL 234
Query: 237 QFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAPARCYEHFTNE 296
Q WS+ H I RP ++P + L W +R Y ++
Sbjct: 235 QCWSYFHLNIDRPKRTTRQFP-------------LALLWKGRQQSRSKNDLFKYRKALDD 281
Query: 297 FDLLTDDQVVWCPYREERMKELQLAPICTQDSHLW-LTRAPLLYFFMVEIYMPERVMRQF 355
D V WCP+ +L + P +D+ L +R L+ +VE + P+R M+QF
Sbjct: 282 LD---PSNVSWCPFE----GDLDIVPQSFKDNLLLGRSRTKLIGPKVVEWHFPDRCMKQF 334
Query: 356 GLHQVCP---PPLRD------------TSAELHWCRR 377
GL QV P PP ++ +A+ W RR
Sbjct: 335 GLCQVIPGEVPPRKNEKNHDEDLLEDMNTADEEWMRR 371
>AT1G51538.1 | chr1:19113183-19115273 FORWARD LENGTH=697
Length = 696
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 139/338 (41%), Gaps = 49/338 (14%)
Query: 52 GLANICRAGLPSI--DRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHA 109
G+ +A + I +++L+ ALV++W PET +F P GE TITL+DV ++LG + G
Sbjct: 80 GIFEAIKASMYKIRKNQSLLLALVEKWCPETKSFLFPWGEATITLEDVLVLLGFSVQGSP 139
Query: 110 VTVNPTEPQN--ELVERYLGKAPPPDRPRPGL--RVSWVRAEFNNCPEDADEETIKQHAR 165
V P E + VE+ L KA +R + GL + WV + + E
Sbjct: 140 VFA-PLESSEMRDSVEK-LEKARLENRGQDGLVRQNLWVSSFLGRGDQMEHE-------- 189
Query: 166 AYILSLISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYR--AMCDACRRQ 223
A++ +S +FPD + P+ L ++ A LA LYR A R+
Sbjct: 190 AFLAFWLSQFVFPDMCRRSISTKVLPMAVRLARGERIAFAPAVLARLYRDLGQIQASARE 249
Query: 224 SDGSNLT--GCLLLLQFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCA 281
N+T L+Q W+WE F P + P E P + RW
Sbjct: 250 KSTPNVTLKSLFKLVQLWAWERFKSTSPKARVI--PKGE--------PRIS-RW------ 292
Query: 282 RRAAPARCYEHFTNEFDL--LTDDQVVWCP---YREERMKELQLAPICTQDSHLWLTR-- 334
+ ++ +FD T +W P Y EE M D + R
Sbjct: 293 -HSQTSKNVRLNLVDFDWRPYTKPLQIWNPPRFYPEEAM--WMTVDDNLDDGFVSFARCM 349
Query: 335 --APLLYFFMVEIYMPERVMRQFGLHQVCPPPLRDTSA 370
+ L+ +VE Y P RV QFGL Q P + D S+
Sbjct: 350 RVSQLVGVGIVEDYYPNRVAMQFGLAQDLPGLVTDHSS 387
>AT4G16050.1 | chr4:9092243-9094243 FORWARD LENGTH=667
Length = 666
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 126/309 (40%), Gaps = 40/309 (12%)
Query: 67 ALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAVTVN-PTEPQNELVERY 125
+L+ +L W PET+TF P GE TITL+DV ++LG I+G +V + + E VE+
Sbjct: 114 SLILSLAQNWCPETNTFVFPWGEATITLEDVNVLLGFSISGSSVFASLQSSEMKEAVEKL 173
Query: 126 LGKAPPPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYILSLISGLLFPDASGDLY 185
+ + SW+ + ++ E A+++ +S +FPD
Sbjct: 174 QKRCQGSMKQE-----SWISSFVDDEMEH----------EAFLVLWLSKFVFPDKFCSSI 218
Query: 186 TFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGSNLTGCLL-LLQFWSWEHF 244
+ FPL L ++ A LA LY + C S + L L L+Q W WE F
Sbjct: 219 SSDVFPLAVRLARGERIAFAPAVLANLYNDLGHICVLASIQNVLASSLFKLVQVWIWERF 278
Query: 245 PIGRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAPARCYEHFTNEFDLLTDDQ 304
RP+ + R +P + +W G+ R H ++ ++
Sbjct: 279 KSIRPEAKVIP----------RGQPRIA-QW-SGLKQRFKNVGLIIFHGNFDWRPYSEPL 326
Query: 305 VVWCP---YREE----RMKELQLAPICTQDSHLWLTR----APLLYFFMVEIYMPERVMR 353
W P Y EE R+ E D + R + L+ +VE Y P RV
Sbjct: 327 ENWNPPRFYVEEAKWVRIDESLDGDYDDDDEFVSFARCVRVSKLVGIGVVENYYPNRVAM 386
Query: 354 QFGLHQVCP 362
QFGL Q P
Sbjct: 387 QFGLAQDVP 395
>AT1G50830.1 | chr1:18835559-18837865 REVERSE LENGTH=769
Length = 768
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 156/397 (39%), Gaps = 59/397 (14%)
Query: 46 RPAGLMGLANICRAGLPSIDRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPI 105
R AG+ + + + +L+ ++ ++W PET +F P GE TITL+DV ++LG +
Sbjct: 98 RKAGIFEAIKVSTYSITK-NPSLILSVSEKWCPETKSFVFPWGEATITLEDVMVLLGFSV 156
Query: 106 AGHAV----TVNPTEPQNELVERYLGKAPPPDRPRPGLRVSWVRAEFNNCPEDADEETIK 161
G V + T + +E + R + SWV D E +
Sbjct: 157 LGSPVFAPLETSETRDSVKKLENVRIQHMNSSTDRRVSQKSWVSTFLG---RGGDMEHV- 212
Query: 162 QHARAYILSLISGLLFPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAM--CDA 219
A+++ +S +FP S + + FP+ L + A LA LYR +
Sbjct: 213 ----AFLVLWLSLFVFPVKSRRNISNHVFPIAVRLARGERIALAPAILAILYRDLDRIHE 268
Query: 220 CRRQS--DGSNLTGCLLLLQFWSWEHFPIGRPDLVKLKYPNVEELEDERDRPTVGLRWVV 277
R+ D +L L+Q W+WE F RP + P E P + +W
Sbjct: 269 VSREDCVDKFHLESLFKLVQVWTWERFRNIRPKASDI--PKGE--------PRIA-QW-H 316
Query: 278 GVCARRAAPARCYEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHL------- 330
G+ R C++ F E+ T W P+R L+ A T D +
Sbjct: 317 GLHRRSKDAWFCFDDF--EWRPYTKALNNWNPFR----FYLEEAIWVTVDESIDDEFASF 370
Query: 331 --WLTRAPLLYFFMVEIYMPERVMRQFGLHQVCPPPLRDTSAELHWCRRGRVHND-WAQK 387
+T + ++ VE Y P RV RQFGL Q P L C+R + W
Sbjct: 371 ARCVTVSQIVGDGFVEDYFPNRVARQFGLDQDLPG--------LATCQRNSTEKEAWNDY 422
Query: 388 HKSFVDMWEAKEQDVVMEDRPYDHSSYMDYLRWYRRS 424
+KS + + ++ M R S Y W+ +S
Sbjct: 423 NKSLIGL------NLYMPSRLDQGSVTARYRVWWLKS 453
>AT5G18510.1 | chr5:6141778-6143886 REVERSE LENGTH=703
Length = 702
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 41/313 (13%)
Query: 65 DRALVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAV-------TVNPTEP 117
D + + ++ ++W ET +F P GE TITL+DV ++LG + G V + +
Sbjct: 94 DTSSILSIAEKWCSETKSFIFPWGEATITLEDVMVLLGFSVLGSPVFSPLECSEMRDSAE 153
Query: 118 QNELVER-YLGKAPPPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYILSLISGLL 176
+ E V R LGKA R R SW + + E A+++ +S +
Sbjct: 154 KLEKVRRDSLGKA-----KRVSQR-SWTSSFMGRGGQMEHE--------AFLVLWLSLFV 199
Query: 177 FPDASGDLYTFYPFPLIADLENIGSYSWGSATLAYLYRAM---CDACRRQSDGS-NLTGC 232
FP + P+ L + A LA+LY+ + CD R + G NL
Sbjct: 200 FPGKFCRSISTNVIPIAVRLARGERIALAPAVLAFLYKDLDRICDFSRGKCAGKVNLKSL 259
Query: 233 LLLLQFWSWEHFPIGRPDLVKL--KYPNVEELED-ERDRPTVGLRWVVGVCARRAAPARC 289
L+Q W+WE F RP ++ P + + + ++ V L + V P +
Sbjct: 260 FKLVQVWTWERFSNIRPKAKEIPKGEPRIAQWDGLQQISKNVKLSFDVFEWRPYTKPLKN 319
Query: 290 YEHFTNEFDLLTDDQVVWCPYREERMKELQLAPICTQDSHLWLTRAPLLYFFMVEIYMPE 349
+ D+ +W + C + S+L VE Y P
Sbjct: 320 WNPLR-----FYVDEAMWLTVDDSVDDAFASFARCVKVSYLAGNG-------FVEDYFPY 367
Query: 350 RVMRQFGLHQVCP 362
RV RQFGL Q P
Sbjct: 368 RVARQFGLSQDLP 380
>AT1G50790.1 | chr1:18824050-18826488 REVERSE LENGTH=813
Length = 812
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 130/338 (38%), Gaps = 63/338 (18%)
Query: 68 LVSALVDRWRPETHTFHMPCGEITITLQDVAMILGLPIAGHAVTVNPTEPQNELVERYLG 127
LV + ++W P+T+TF GE TITL+DV ++LG + G V E++ + LG
Sbjct: 101 LVMGIAEKWCPDTNTFVFSWGEATITLEDVMVLLGFSVLGSPVFATLDSSGKEIMAK-LG 159
Query: 128 K---APPPDRPRPGLRVSWVRAEFNNCPEDADEETIKQHARAYILSLISGLLFPDASGDL 184
K D+ +++W+ ++ E +H A+++ +S +FP +
Sbjct: 160 KEWLKIKKDKGTFVTQIAWIERFMDSGDE-------LEHL-AFLVLWLSYFVFPTRYYHI 211
Query: 185 YTFYPFPLIADLENIGSYSWGSATLAYLYRAMCDACRRQSDGS--------NLTGCLLLL 236
Y +P+ L N + A LA+LY + + S +L+ L+
Sbjct: 212 YEAI-WPIAIHLSNGTKMALAPAVLAHLYADLSLLKNHITALSESPIKVEIDLSSLCKLV 270
Query: 237 QFWSWEHFPI--GRPDLVKLKYPNVEELEDERDRPTVGLRWVVGVCARRAAPARCYEHFT 294
W WE F +P+L+ P + D + R + R
Sbjct: 271 NVWIWERFRALQSKPNLLLKGEPRLALWNDLKQRTSNAKR------------------IL 312
Query: 295 NEFDLLTDDQVVWCPYRE------------ERMKELQLAPICTQDSHLWLTR----APLL 338
N + D WCPY + E+ + L P D + R + L+
Sbjct: 313 NNSKI---DGFEWCPYTKTVKNWDFPQFYPEKATWVTLVP-NRDDEFISFARCIMVSQLV 368
Query: 339 YFFMVEIYMPERVMRQFG-LHQV-CPPPLRDTSAELHW 374
+E Y P RV QFG L V CP + S E W
Sbjct: 369 GIDSLEHYYPNRVASQFGRLQDVHCPVNRNNLSREAAW 406
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,027,074
Number of extensions: 550694
Number of successful extensions: 1121
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1097
Number of HSP's successfully gapped: 9
Length of query: 599
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 495
Effective length of database: 8,255,305
Effective search space: 4086375975
Effective search space used: 4086375975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 115 (48.9 bits)