Os01g0167400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein synthesis inhibitor II (EC 3.2.2.22) (Ribosome-inactivating protein II) (rRNA N-glycosidase).
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Os01g0167400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein synthesis inhibitor II (EC 3.2.2.22) (Ribosome-inactivating protein II) (rRNA N-glycosidase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.33 | 0.444 | 7.99 | -0.357 | 0.773 | -0.927 | -1.36 | 0.113 | 0.287 | 3.89 | 10.01 | 88 | -- | -- |
| 89.37 | 0.44 | 7.99 | -0.356 | 0.778 | -0.922 | -1.42 | -- | 0.289 | 3.84 | 10.01 | 87 | -- | -- |
| 92.33 | 0.448 | 7.99 | -0.386 | 0.824 | -0.87 | -- | 0.634 | 0.28 | 3.69 | 10 | 70 | -- | -- |
| 94.49 | 0.453 | 7.99 | -0.367 | 0.814 | -0.879 | -- | -- | 0.293 | 3.77 | 10.05 | 66 | -- | -- |
| 110.99 | 0.491 | 7.99 | -0.302 | -- | -1.17 | -- | 0.117 | 0.399 | -- | 7.26 | 204 | -- | -- |
| 113.47 | 0.499 | 8.02 | -0.481 | 1.55 | -- | -0.927 | -- | 0.212 | 2.21 | -- | -- | -- | -- |
| 116.63 | 0.506 | 8.01 | -0.455 | 1.55 | -- | -- | -- | 0.218 | 2.13 | -- | -- | -- | -- |
| 106.26 | 0.48 | 8 | -0.45 | -- | -1.31 | -- | -- | 0.254 | -- | 5.58 | 198 | -- | -- |
| 97.95 | 0.461 | 7.97 | -- | 0.815 | -0.871 | -- | -- | 0.331 | 3.75 | 10.1 | 70 | -- | -- |
| 259.67 | 0.753 | 8 | -0.39 | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
| 122.07 | 0.517 | 8 | -- | 1.54 | -- | -- | -- | 0.269 | 2.12 | -- | -- | -- | -- |
| 111.39 | 0.492 | 7.99 | -- | -- | -1.31 | -- | -- | 0.305 | -- | 5.29 | 198 | -- | -- |
| 263.68 | 0.758 | 7.99 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.76 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 17 |
| 2 | 81.90 | humidity | 70.0 | 10 | > th | dose dependent | sin | 1 | NA |
| 3 | 81.97 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 19 |
| 4 | 82.02 | humidity | 90.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 15 | 83.22 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 23 | 83.73 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 27 | 83.91 | humidity | 80.0 | 10 | < th | dose independent | sin | 1 | NA |
| 33 | 84.12 | radiation | 10.0 | 90 | > th | dose independent | sin | 2 | NA |
| 68 | 85.23 | humidity | 80.0 | 30 | > th | dose independent | sin | 1 | NA |
| 76 | 85.38 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 81 | 85.44 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 87 | 85.67 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 107 | 86.12 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 122 | 86.33 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 129 | 86.41 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 135 | 86.45 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 139 | 86.52 | humidity | 80.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 148 | 86.60 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 152 | 86.63 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 164 | 86.67 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 13 |
| 186 | 86.81 | radiation | 10.0 | 90 | > th | dose independent | rect. | 16 | 23 |
| 201 | 86.98 | radiation | 10.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 216 | 87.07 | radiation | 1.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 225 | 87.10 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 226 | 87.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 22 |
| 251 | 87.27 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 255 | 87.31 | radiation | 10.0 | 10 | > th | dose independent | sin | 1 | NA |
| 328 | 87.73 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 372 | 87.98 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 13 | 20 |
| 376 | 88.01 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 410 | 88.21 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 411 | 88.21 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 422 | 88.26 | radiation | 10.0 | 90 | > th | dose independent | rect. | 7 | 7 |
| 449 | 88.35 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 16 |
| 485 | 88.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 603 | 88.97 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 623 | 89.09 | radiation | 10.0 | 90 | > th | dose independent | rect. | 7 | 11 |
| 678 | 89.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 710 | 89.38 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 22 |
| 758 | 89.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 782 | 89.52 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 865 | 89.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 880 | 89.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 888 | 89.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 15 |
| 892 | 89.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 915 | 89.66 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 972 | 89.80 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 17 |