Os01g0158000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Importin alpha-2 subunit.
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Os01g0158000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Importin alpha-2 subunit.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.08 | 0.216 | 10.3 | 0.186 | 0.186 | -0.493 | -0.161 | 0.0814 | 0.229 | 22.9 | 70 | 1459 | -- | -- |
| 21.1 | 0.214 | 10.3 | 0.175 | 0.186 | -0.489 | -0.165 | -- | 0.227 | 22.9 | 69.92 | 1458 | -- | -- |
| 21.19 | 0.214 | 10.3 | 0.192 | 0.186 | -0.497 | -- | 0.0881 | 0.229 | 22.8 | 70 | 1460 | -- | -- |
| 21.21 | 0.214 | 10.3 | 0.183 | 0.187 | -0.492 | -- | -- | 0.227 | 22.9 | 69.9 | 1460 | -- | -- |
| 23.18 | 0.224 | 10.3 | 0.21 | -- | -0.531 | -- | 0.182 | 0.235 | -- | 69.87 | 1514 | -- | -- |
| 30.21 | 0.258 | 10.3 | 0.0649 | 0.191 | -- | -0.242 | -- | 0.186 | 22.9 | -- | -- | -- | -- |
| 30.45 | 0.258 | 10.3 | 0.0751 | 0.193 | -- | -- | -- | 0.187 | 22.6 | -- | -- | -- | -- |
| 23.21 | 0.224 | 10.3 | 0.184 | -- | -0.528 | -- | -- | 0.259 | -- | 70.25 | 1515 | -- | -- |
| 22.06 | 0.219 | 10.3 | -- | 0.186 | -0.471 | -- | -- | 0.205 | 22.8 | 69.52 | 1473 | -- | -- |
| 32.75 | 0.267 | 10.3 | 0.0787 | -- | -- | -- | -- | 0.188 | -- | -- | -- | -- | -- |
| 30.6 | 0.259 | 10.3 | -- | 0.194 | -- | -- | -- | 0.179 | 22.7 | -- | -- | -- | -- |
| 24.08 | 0.229 | 10.3 | -- | -- | -0.495 | -- | -- | 0.239 | -- | 70.02 | 1531 | -- | -- |
| 32.92 | 0.268 | 10.3 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.83 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 20.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 21 |
| 3 | 20.87 | humidity | 70 | 1440 | < th | dose independent | rect. | 10 | 10 |
| 14 | 20.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 44 | 20.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 45 | 21.00 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 59 | 21.01 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 75 | 21.04 | humidity | 70 | 1440 | < th | dose independent | sin | 21 | NA |
| 98 | 21.09 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 99 | 21.10 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 182 | 21.13 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 187 | 21.13 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 221 | 21.14 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 254 | 21.15 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 260 | 21.18 | humidity | 70 | 1440 | > th | dose independent | sin | 21 | NA |
| 281 | 21.20 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 311 | 21.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 314 | 21.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 335 | 21.32 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 356 | 21.38 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 363 | 21.41 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 364 | 21.42 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 389 | 21.50 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 5 |
| 398 | 21.52 | humidity | 60 | 1440 | > th | dose dependent | sin | 1 | NA |
| 463 | 21.59 | humidity | 60 | 1440 | > th | dose dependent | rect. | 4 | 11 |
| 486 | 21.64 | humidity | 60 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 497 | 21.67 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 538 | 21.73 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 560 | 21.77 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 616 | 21.81 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 623 | 21.82 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 649 | 21.84 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 706 | 21.88 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 18 |
| 739 | 21.91 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 838 | 21.94 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 874 | 21.97 | radiation | 40 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 894 | 21.97 | radiation | 40 | 1440 | < th | dose dependent | rect. | 13 | 21 |
| 905 | 21.98 | radiation | 40 | 1440 | < th | dose dependent | rect. | 8 | 10 |