Os01g0156300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cappuccino protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0156300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cappuccino protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.9 | 0.517 | 5.88 | -0.911 | 0.23 | -0.603 | 0.831 | -2.92 | 0.313 | 6.68 | 1004 | 5229 | -- | -- |
| 128.03 | 0.527 | 5.87 | -0.754 | 0.229 | -0.814 | 0.816 | -- | 0.266 | 6.88 | 1003 | 11106 | -- | -- |
| 121.99 | 0.514 | 5.88 | -0.943 | 0.233 | -0.666 | -- | -2.98 | 0.314 | 6.03 | 1004 | 5854 | -- | -- |
| 129.66 | 0.53 | 5.87 | -0.736 | 0.236 | -0.815 | -- | -- | 0.269 | 6.44 | 1003 | 11106 | -- | -- |
| 124.65 | 0.52 | 5.88 | -0.955 | -- | -0.669 | -- | -3.11 | 0.309 | -- | 1004 | 5806 | -- | -- |
| 141.54 | 0.558 | 5.84 | -0.852 | 0.237 | -- | 0.834 | -- | 0.404 | 6.85 | -- | -- | -- | -- |
| 143.25 | 0.56 | 5.84 | -0.839 | 0.244 | -- | -- | -- | 0.401 | 6.31 | -- | -- | -- | -- |
| 132.57 | 0.536 | 5.87 | -0.73 | -- | -0.822 | -- | -- | 0.273 | -- | 1003 | 11080 | -- | -- |
| 143.47 | 0.558 | 5.85 | -- | 0.219 | -0.86 | -- | -- | 0.348 | 6.29 | 1002 | 12113 | -- | -- |
| 146.34 | 0.565 | 5.84 | -0.832 | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
| 161.79 | 0.595 | 5.82 | -- | 0.232 | -- | -- | -- | 0.494 | 6.5 | -- | -- | -- | -- |
| 143.71 | 0.558 | 5.81 | -- | -- | -0.888 | -- | -- | 0.453 | -- | 997 | 11361 | -- | -- |
| 164.61 | 0.599 | 5.82 | -- | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.29 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 2 | 113.65 | temperature | 15 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 3 | 113.68 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 4 | 113.69 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 7 | 114.05 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 8 | 114.06 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 11 | 114.18 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 12 | 114.29 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 16 | 114.54 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 18 | 114.58 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 19 | 114.62 | humidity | 60 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 23 | 114.88 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 32 | 115.23 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 35 | 115.26 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 39 | 115.32 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 44 | 115.40 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 48 | 115.50 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 61 | 115.73 | temperature | 15 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 69 | 115.79 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 74 | 115.83 | temperature | 15 | 14400 | > th | dose independent | sin | 2 | NA |
| 86 | 115.89 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 163 | 116.24 | temperature | 15 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 173 | 116.28 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 205 | 116.37 | temperature | 15 | 14400 | > th | dose independent | rect. | 12 | 22 |
| 207 | 116.38 | temperature | 15 | 14400 | < th | dose independent | sin | 5 | NA |
| 253 | 116.48 | temperature | 15 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 286 | 116.54 | temperature | 15 | 14400 | < th | dose independent | rect. | 15 | 19 |
| 293 | 116.56 | temperature | 15 | 14400 | > th | dose independent | no | NA | NA |
| 297 | 116.56 | temperature | 15 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 312 | 116.58 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 365 | 116.67 | wind | 9 | 4320 | > th | dose dependent | sin | 13 | NA |
| 371 | 116.70 | temperature | 15 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 460 | 116.92 | wind | 9 | 4320 | < th | dose independent | sin | 13 | NA |
| 483 | 117.00 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 486 | 117.01 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 512 | 117.09 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 552 | 117.18 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 12 |
| 566 | 117.23 | temperature | 15 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 569 | 117.23 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 585 | 117.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 600 | 117.30 | wind | 9 | 4320 | > th | dose independent | sin | 13 | NA |
| 611 | 117.32 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 622 | 117.35 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 655 | 117.44 | temperature | 15 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 662 | 117.47 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 720 | 117.62 | temperature | 15 | 14400 | < th | dose independent | no | NA | NA |
| 742 | 117.69 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 768 | 117.79 | temperature | 15 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 870 | 118.23 | temperature | 20 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 890 | 118.34 | temperature | 20 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 914 | 118.46 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 915 | 118.46 | wind | 9 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 930 | 118.54 | temperature | 20 | 14400 | < th | dose dependent | rect. | 14 | 1 |