Os01g0151600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0151600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.05 | 0.342 | 8.82 | -1.71 | 0.473 | -1.3 | -0.125 | -0.96 | -0.393 | 7.1 | 25.06 | 714 | -- | -- |
| 52.81 | 0.338 | 8.82 | -1.86 | 0.726 | -1.41 | -0.295 | -- | -0.383 | 6.3 | 44.51 | 528 | -- | -- |
| 53.08 | 0.339 | 8.81 | -1.7 | 0.474 | -1.31 | -- | -0.997 | -0.39 | 7.22 | 25.1 | 715 | -- | -- |
| 52.99 | 0.339 | 8.82 | -1.87 | 0.722 | -1.42 | -- | -- | -0.384 | 6.48 | 136.1 | 549 | -- | -- |
| 60.74 | 0.363 | 8.83 | -1.85 | -- | -1.14 | -- | -0.197 | -0.365 | -- | 35.72 | 1320 | -- | -- |
| 75.26 | 0.407 | 8.79 | -1.54 | 0.351 | -- | -0.803 | -- | -0.175 | 5.2 | -- | -- | -- | -- |
| 76.64 | 0.41 | 8.78 | -1.54 | 0.354 | -- | -- | -- | -0.171 | 5.87 | -- | -- | -- | -- |
| 60.78 | 0.363 | 8.84 | -1.88 | -- | -1.14 | -- | -- | -0.371 | -- | 55.55 | 1320 | -- | -- |
| 134.71 | 0.541 | 8.76 | -- | 0.491 | -0.581 | -- | -- | -0.07 | 6.03 | 122 | 410 | -- | -- |
| 83.14 | 0.426 | 8.79 | -1.53 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 138.86 | 0.551 | 8.74 | -- | 0.331 | -- | -- | -- | 0.000583 | 6.09 | -- | -- | -- | -- |
| 143.75 | 0.56 | 8.76 | -- | -- | -0.227 | -- | -- | -0.0189 | -- | 122 | 410 | -- | -- |
| 144.54 | 0.561 | 8.75 | -- | -- | -- | -- | -- | 0.00696 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 2 | 47.53 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 4 | 47.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 6 | 47.69 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 10 | 47.76 | temperature | 15 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 16 | 47.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 19 | 47.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 33 | 48.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 44 | 48.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 58 | 48.60 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 110 | 49.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 21 |
| 203 | 49.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 255 | 50.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 7 |
| 414 | 51.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 427 | 51.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 458 | 51.31 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 16 |
| 608 | 51.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 645 | 52.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 801 | 52.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 878 | 52.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 891 | 52.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 933 | 52.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 979 | 53.06 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |