Os01g0151500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Gamma-glutamyltranspeptidase family protein.
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Os01g0151500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Gamma-glutamyltranspeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 357.09 | 0.888 | 5.11 | -2.84 | 2.07 | 2.33 | -0.531 | -8.79 | -0.545 | 15.5 | 25.46 | 1194 | -- | -- |
| 400.43 | 0.932 | 4.89 | -0.844 | 2.02 | 1.89 | -0.45 | -- | -0.216 | 15.5 | 11.65 | 1126 | -- | -- |
| 357.86 | 0.881 | 5.1 | -2.82 | 2.06 | 2.32 | -- | -8.65 | -0.508 | 15.5 | 25.63 | 1200 | -- | -- |
| 379.97 | 0.908 | 4.86 | -0.734 | 2.1 | 1.53 | -- | -- | -0.0496 | 15.5 | 25.32 | 1173 | -- | -- |
| 471.36 | 1.01 | 5.01 | -1.85 | -- | 2.8 | -- | -5.25 | -0.604 | -- | 20.82 | 229 | -- | -- |
| 452.31 | 0.997 | 4.82 | -0.275 | 1.86 | -- | -0.563 | -- | 0.0975 | 15.9 | -- | -- | -- | -- |
| 453.22 | 0.997 | 4.82 | -0.282 | 1.86 | -- | -- | -- | 0.0943 | 15.9 | -- | -- | -- | -- |
| 485.41 | 1.03 | 4.91 | -0.974 | -- | 2.81 | -- | -- | -0.383 | -- | 17.6 | 190 | -- | -- |
| 391.14 | 0.921 | 4.79 | -- | 2.03 | 1.26 | -- | -- | 0.195 | 15.6 | 27.22 | 1165 | -- | -- |
| 642.68 | 1.18 | 4.81 | -0.359 | -- | -- | -- | -- | 0.0447 | -- | -- | -- | -- | -- |
| 455.32 | 0.998 | 4.81 | -- | 1.87 | -- | -- | -- | 0.126 | 15.9 | -- | -- | -- | -- |
| 508.45 | 1.05 | 4.88 | -- | -- | 2.47 | -- | -- | -0.244 | -- | 18.58 | 162 | -- | -- |
| 646.08 | 1.19 | 4.8 | -- | -- | -- | -- | -- | 0.0845 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 348.86 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 3 | 350.92 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 8 | 352.92 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 13 | 353.65 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 25 | 356.09 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 39 | 357.42 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 14 |
| 42 | 357.73 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 87 | 362.25 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 89 | 362.44 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 2 |
| 101 | 363.11 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 13 |
| 104 | 363.37 | humidity | 80 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 122 | 364.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 183 | 366.22 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 199 | 366.32 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 200 | 366.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 211 | 366.55 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 300 | 368.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 18 |
| 361 | 368.54 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 366 | 368.57 | radiation | 20 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 370 | 368.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 397 | 368.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 429 | 369.57 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 449 | 369.71 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 487 | 370.07 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 494 | 370.14 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 507 | 370.32 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 576 | 371.08 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 622 | 371.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 633 | 371.69 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 7 |
| 636 | 371.79 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 661 | 372.30 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 688 | 372.86 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 690 | 372.90 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 694 | 373.09 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 695 | 373.09 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 696 | 373.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 700 | 373.27 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 864 | 375.90 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 866 | 375.92 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 870 | 375.95 | radiation | 30 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 872 | 375.96 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 893 | 376.26 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 902 | 376.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 903 | 376.33 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 920 | 376.36 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 923 | 376.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 941 | 376.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 944 | 376.50 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 997 | 376.81 | wind | 7 | 43200 | < th | dose independent | sin | 23 | NA |