Os01g0151100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os01g0151100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.7 | 0.445 | 7.45 | 2.25 | 0.939 | -1.79 | -0.133 | 2.37 | 0.196 | 11.7 | 19.27 | 1385 | -- | -- |
| 102.96 | 0.473 | 7.52 | 1.96 | 1 | -1.98 | -0.247 | -- | 0.137 | 11.8 | 12.94 | 7287 | -- | -- |
| 89.78 | 0.441 | 7.45 | 2.24 | 0.936 | -1.8 | -- | 2.37 | 0.197 | 11.7 | 19.19 | 1383 | -- | -- |
| 102.86 | 0.472 | 7.5 | 1.99 | 1.02 | -2.04 | -- | -- | 0.182 | 11.9 | 13.33 | 7347 | -- | -- |
| 135.32 | 0.542 | 7.42 | 2.41 | -- | -2.1 | -- | 2.68 | 0.267 | -- | 19.95 | 2368 | -- | -- |
| 175.85 | 0.622 | 7.62 | 0.947 | 1.06 | -- | -0.133 | -- | -0.38 | 12.1 | -- | -- | -- | -- |
| 175.93 | 0.621 | 7.62 | 0.942 | 1.06 | -- | -- | -- | -0.381 | 12.1 | -- | -- | -- | -- |
| 139.93 | 0.551 | 7.54 | 1.78 | -- | -2.29 | -- | -- | 0.0733 | -- | 7.915 | 2343 | -- | -- |
| 151.66 | 0.574 | 7.58 | -- | 0.857 | -1.86 | -- | -- | -0.229 | 13.8 | -25.1 | 691 | -- | -- |
| 246.08 | 0.733 | 7.64 | 0.909 | -- | -- | -- | -- | -0.396 | -- | -- | -- | -- | -- |
| 199.31 | 0.66 | 7.65 | -- | 1.04 | -- | -- | -- | -0.486 | 12 | -- | -- | -- | -- |
| 185.69 | 0.635 | 7.6 | -- | -- | -2.13 | -- | -- | -0.218 | -- | -11.84 | 917 | -- | -- |
| 267.85 | 0.764 | 7.67 | -- | -- | -- | -- | -- | -0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 23 | 83.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 26 | 83.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 56 | 84.74 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 142 | 86.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 187 | 87.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 278 | 88.01 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 320 | 88.21 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 435 | 88.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 501 | 89.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 602 | 89.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 683 | 89.98 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 731 | 90.20 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 820 | 90.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 864 | 90.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 865 | 90.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 874 | 90.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 906 | 90.81 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 910 | 90.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |