BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0151100 Os01g0151100|AK120777
(547 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37570.1 | chr2:15761466-15762950 REVERSE LENGTH=495 621 e-178
AT3G12570.1 | chr3:3989407-3990876 FORWARD LENGTH=490 577 e-165
AT5G02480.1 | chr5:548152-549678 FORWARD LENGTH=509 531 e-151
>AT2G37570.1 | chr2:15761466-15762950 REVERSE LENGTH=495
Length = 494
Score = 621 bits (1601), Expect = e-178, Method: Compositional matrix adjust.
Identities = 315/486 (64%), Positives = 376/486 (77%), Gaps = 26/486 (5%)
Query: 67 RESAHPGPPDINLPLSADXXXXXXXXXXXWGIDQFDMLDVGLGTQTYESEVALTLPKLTG 126
R+S GPPDINLPLSA+ W +D D+LDVGLG+Q YE+E +++ G
Sbjct: 30 RQSLLSGPPDINLPLSAERSPPPPP----WNLDACDILDVGLGSQAYETENYMSVVPKVG 85
Query: 127 NGNTAVGVGARKCAKRGDSIWGAWFFFNHYFKPALVEKPKGKVTRDSSGSVSGFEKSDLR 186
RKCAKR DSIWGAWFFF+ YFKPAL EK K K+ RDS+G +SGF+KSDL+
Sbjct: 86 ----------RKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIVRDSNG-ISGFDKSDLK 134
Query: 187 LDVFLVQHDMENMYMWVFKERPDNALGKMQLRSFMNGHSKHGEPSFPFSADKGFARSHRM 246
LDVFLVQHDMENMYMWVFKERP+NALGKMQLRS+MNGHS+ G+ FPFS +KGF RSHRM
Sbjct: 135 LDVFLVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGDRLFPFSVEKGFVRSHRM 194
Query: 247 QRKHYRGLSNPQCLHGIEIVSSPNLSAVPEAEMKRWAELTGRELNFSIPPEASDFESWRN 306
QRKHYRGLSNPQC+HGIE+V PNL+ + E E KRW ELTGR+LNF+IPPEASDF SWRN
Sbjct: 195 QRKHYRGLSNPQCVHGIELVPLPNLTCLDEEERKRWMELTGRDLNFTIPPEASDFGSWRN 254
Query: 307 LPSTDFELDRPLPLSSKITHGSHSHKKALNGSGLNLSTPP---SSDDGMDLSPKCAKRRK 363
LP+TDFEL+RP P S K +HS KK LNGSGLNLST P S+ + DLSP K+RK
Sbjct: 255 LPNTDFELERPTP-SLKNPTANHS-KKLLNGSGLNLSTQPSNHSNGEATDLSPSSHKKRK 312
Query: 364 DFFAHGA-DEDCVMANNSCSDREQEIEVHTGE-PSWMHEFTGVAKHASGPVTAAKTIYED 421
D F++G +E+C + N + IE H E P+W +EFTG K+ GPVTAAKTIYED
Sbjct: 313 DLFSNGIHEEECCLTVNP---QPPVIEAHQNELPTWSNEFTGAMKNVYGPVTAAKTIYED 369
Query: 422 DEGYLIMVSMLFSDPHSVKVSWRNTLTHGIVKISCVSTARMPFVKRHDRTFKLTDPFPEH 481
+EGYLI++S+ F D +SVKVSWRNTLTHGI+K+SC+ST+R+PF+KRHDRTFKLTD EH
Sbjct: 370 EEGYLIIISLPFVDLNSVKVSWRNTLTHGIIKVSCLSTSRVPFIKRHDRTFKLTDSASEH 429
Query: 482 CPPGEFVREIPLATRIPEDAKLEAYYDETGTGLEIMVPKHRVGPEEHEVQVCMRPPHLGE 541
CPPGEFVREIPL+ RIPEDA +EAYYD G+ LEI+VPK R GPEEHEV+VC+R P+LG
Sbjct: 430 CPPGEFVREIPLSNRIPEDANIEAYYDGPGSVLEILVPKLRAGPEEHEVRVCLR-PNLGG 488
Query: 542 NDLLLS 547
NDL+L+
Sbjct: 489 NDLMLT 494
>AT3G12570.1 | chr3:3989407-3990876 FORWARD LENGTH=490
Length = 489
Score = 577 bits (1486), Expect = e-165, Method: Compositional matrix adjust.
Identities = 306/539 (56%), Positives = 372/539 (69%), Gaps = 57/539 (10%)
Query: 1 MGEPLLTTLSMENTNSHPCTRLSMDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRE 60
MGE L+TTLSMEN HP T LSMD +
Sbjct: 1 MGETLITTLSMENY--HPSTLLSMD-------------------SGAFTHEESERDMNGS 39
Query: 61 LFIIPRRESAHPGPPDINLPLSADXXXXXXXXXXXWGIDQFDMLDVGLGTQTYESEVALT 120
L + GPPDINLPLS++ W + D+LDVGLG Q YE E +
Sbjct: 40 LILT--------GPPDINLPLSSEARPSLLL----WN-EHCDILDVGLGPQLYEPEAVVH 86
Query: 121 LPKLTGNGNTAVGVGARKCAKRGDSIWGAWFFFNHYFKPALVEKPKGKVTRDSSGSVSGF 180
+PK+ A+K KR DS WGAW FF+ YFKP L EK K K+TRDS+G +SG+
Sbjct: 87 VPKV-----------AKKYNKRVDSAWGAWLFFSFYFKPVLDEKSKSKLTRDSNG-LSGY 134
Query: 181 EKSDLRLDVFLVQHDMENMYMWVFKERPDNALGKMQLRSFMNGHSKHGEPSFPFSADKGF 240
+KSDL+LD FLVQHDMENMYMWVFKE+P+NALGKMQLRS+MNGHS+ GE FPFS DKGF
Sbjct: 135 DKSDLQLDSFLVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSREGERPFPFSVDKGF 194
Query: 241 ARSHRMQRKHYRGLSNPQCLHGIEIVSSPNLSAVPEAEMKRWAELTGRELNFSIPPEASD 300
RSHRMQRKHYRGLSNPQCLHGIE+V SPNLS + E E K+W ELTGR++NF+IP EASD
Sbjct: 195 VRSHRMQRKHYRGLSNPQCLHGIEVVYSPNLSVLSEDEKKKWTELTGRDVNFAIPAEASD 254
Query: 301 FESWRNLPSTDFELDRPLPLSSKITHGSHSHKKALNGSGLNLST--PPSSDDGMDLS-PK 357
+ SWRNLP+T+FE +RPLPL+ H+H K LNG+ LNLST P + D +++
Sbjct: 255 YGSWRNLPNTEFEAERPLPLAKA---NGHTHLKKLNGTCLNLSTHSPDHAVDTVEVQLAG 311
Query: 358 CAKRRKDFFAHGADEDCVMANNSCSDREQEIEVHTGEPSWMHEFTGVAKHASGPVTAAKT 417
KR++D A G +D +S S++ ++++H E W ++F+GV K+ GPVTAAKT
Sbjct: 312 SNKRKRDCLALGNCDD-----SSSSEKSLDMKIHATELPWSNDFSGVMKNVYGPVTAAKT 366
Query: 418 IYEDDEGYLIMVSMLFSDPHSVKVSWRNTLTHGIVKISCVSTARMPFVKRHDRTFKLTDP 477
IYEDD G+LI++S+ F D VKV+WRNT HGIVKISCVSTA PF+KRHDRTFKLTDP
Sbjct: 367 IYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAHGIVKISCVSTACEPFIKRHDRTFKLTDP 426
Query: 478 FPEHCPPGEFVREIPLATRIPEDAKLEAYYDETGTGLEIMVPKHRVGPEEHEVQVCMRP 536
PEHCPPGEFVRE+ L RIP+DAKLEAY DETGT LE++VPKHR+GPEEHEV+VC+RP
Sbjct: 427 TPEHCPPGEFVREVSLPNRIPDDAKLEAYRDETGTTLEVLVPKHRMGPEEHEVRVCLRP 485
>AT5G02480.1 | chr5:548152-549678 FORWARD LENGTH=509
Length = 508
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/560 (52%), Positives = 367/560 (65%), Gaps = 72/560 (12%)
Query: 1 MGEPLLTTLSMENTNSHPCTRLSMDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRE 60
M +LT LSMEN HP T LSMD D E
Sbjct: 1 MKGSILTVLSMEN--HHPSTLLSMD-----------------------SSGSSHEELDLE 35
Query: 61 LFIIPRRESAHPGPPDINLPLSADXXXXXXXXXXXWGIDQFD-MLDVGLGTQTYESEVAL 119
+ R+ + + PPDINLPLS W +D D +LDVGL + YE+E L
Sbjct: 36 MNNGNRQITLY-NPPDINLPLSVGRSSPS------WNLDSCDNILDVGLSSHVYETETFL 88
Query: 120 TLPKLTGNGNTAVGVGARKCAKRGDSIWGAWFFFNHYFKPALVEKPKGKVTRDSSGS--- 176
N A+KC KRGDS+WGAWFFF+ YF+PAL EK K KV R+S G
Sbjct: 89 ---------NVVPSKVAKKCLKRGDSMWGAWFFFSFYFRPALNEKSKSKVIRESGGGGGG 139
Query: 177 ----VSGFEKSDLRLDVFLVQHDMENMYMWVFKERPDNALGKMQLRSFMNGHSKHGEPSF 232
+GF+KSDL+LDVFLVQHDMENMYMW FK++P+NALGKMQLRS+MNGHS+ GE F
Sbjct: 140 GGGCFTGFDKSDLKLDVFLVQHDMENMYMWAFKDKPENALGKMQLRSYMNGHSRQGERPF 199
Query: 233 PFSADKGFARSHRMQRKHYRGLSNPQCLHGIEIVSSPNLSAVPEAEMKRWAELTGRELNF 292
PFSA+KGF RSHRMQRKHYRGLSNPQCLHGIE V+SP+L V E + KRW ELTGR+L F
Sbjct: 200 PFSAEKGFVRSHRMQRKHYRGLSNPQCLHGIEFVASPSLFGVGEEDKKRWMELTGRDLKF 259
Query: 293 SIPPEASDFESWRNLPSTDFELDRPLPLSSKITHGSHSHKKALNGSGLNLSTPP---SSD 349
+IPP+ASDF SWRNLP+TD EL+RP ++ + + KK LNGSGL+L++ S+
Sbjct: 260 TIPPDASDFGSWRNLPNTDIELERPAHVTKAAPNNA---KKILNGSGLHLTSNASFSSNG 316
Query: 350 DGMDLSPKCA----KRRKDFFAHGADED--CVMANNSCSDREQEIEVHTGE--PSWMHEF 401
D D SP K+RK+F + G+ E+ C+ NN IE H + PSW+++F
Sbjct: 317 DSSDQSPGGGVINNKKRKEFLSPGSSEEECCLTVNN--------IETHHAKDPPSWVNDF 368
Query: 402 TGVAKHASGPVTAAKTIYEDDEGYLIMVSMLFSDPHSVKVSWRNTLTHGIVKISCVSTAR 461
TGV K++ GPVTAAKT+YED+E YL+++++ F D ++VKVSWRN +T+GIVK++ +ST+R
Sbjct: 369 TGVMKNSCGPVTAAKTVYEDEEAYLVVITLPFVDLNTVKVSWRNNITNGIVKVTGLSTSR 428
Query: 462 MPFVKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDAKLEAYYDETGTGLEIMVPKH 521
FVKR DRTFKL D EHCPPGEF+REI L RIPE+A +EAY+D TG LEI+VPK
Sbjct: 429 ASFVKRRDRTFKLVDQMAEHCPPGEFMREIQLPNRIPEEANIEAYFDGTGPVLEIVVPKL 488
Query: 522 RVG-PEEHEVQVCMRPPHLG 540
R G EEHEV+VC+R HLG
Sbjct: 489 RGGVEEEHEVRVCLRSHHLG 508
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,614,504
Number of extensions: 553363
Number of successful extensions: 1110
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1092
Number of HSP's successfully gapped: 3
Length of query: 547
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 444
Effective length of database: 8,282,721
Effective search space: 3677528124
Effective search space used: 3677528124
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)