Os01g0137700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0137700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 462.48 | 1.01 | 6.25 | 0.517 | 1.25 | 2.37 | -0.609 | 3.75 | -0.903 | 13 | 0.1666 | 4529 | -- | -- |
| 460.98 | 1 | 6.22 | 0.398 | 1.26 | 2.04 | -0.795 | -- | -0.96 | 12.9 | 1 | 5939 | -- | -- |
| 464.01 | 1 | 6.25 | 0.49 | 1.25 | 2.35 | -- | 3.72 | -0.905 | 13.1 | 0.4654 | 4528 | -- | -- |
| 461.95 | 1 | 6.22 | 0.331 | 1.28 | 2.06 | -- | -- | -0.965 | 13.1 | 0.996 | 5929 | -- | -- |
| 560.7 | 1.1 | 6.27 | 0.478 | -- | 2.26 | -- | 4.09 | -0.924 | -- | 0.5351 | 4643 | -- | -- |
| 551.65 | 1.1 | 6.16 | -0.0941 | 1.26 | -- | -0.324 | -- | -0.694 | 13.1 | -- | -- | -- | -- |
| 552.08 | 1.1 | 6.16 | -0.105 | 1.26 | -- | -- | -- | -0.695 | 13.1 | -- | -- | -- | -- |
| 563.97 | 1.11 | 6.24 | 0.238 | -- | 1.96 | -- | -- | -0.984 | -- | 1 | 5939 | -- | -- |
| 463.93 | 1 | 6.22 | -- | 1.28 | 2.02 | -- | -- | -0.984 | 13.2 | 0.8758 | 5939 | -- | -- |
| 650.11 | 1.19 | 6.18 | -0.153 | -- | -- | -- | -- | -0.72 | -- | -- | -- | -- | -- |
| 552.37 | 1.1 | 6.16 | -- | 1.26 | -- | -- | -- | -0.683 | 13.1 | -- | -- | -- | -- |
| 565.34 | 1.11 | 6.24 | -- | -- | 1.91 | -- | -- | -0.997 | -- | 1 | 5929 | -- | -- |
| 650.73 | 1.19 | 6.17 | -- | -- | -- | -- | -- | -0.703 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 443.31 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 2 | 443.32 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 7 |
| 11 | 443.80 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 37 | 444.57 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 8 |
| 104 | 445.44 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 131 | 445.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 135 | 445.85 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 22 |
| 136 | 445.85 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 191 | 446.48 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 12 |
| 195 | 446.52 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 200 | 446.53 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 1 | 18 |
| 218 | 446.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 264 | 446.92 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 280 | 447.15 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 297 | 447.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 299 | 447.27 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 17 |
| 304 | 447.28 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 12 |
| 321 | 447.36 | humidity | 70.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 326 | 447.38 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 334 | 447.42 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 360 | 447.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 368 | 447.66 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 369 | 447.69 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 408 | 448.00 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 410 | 448.00 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 21 |
| 414 | 448.01 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 434 | 448.04 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 3 | 21 |
| 439 | 448.05 | humidity | 70.0 | 14400 | > th | dose independent | no | NA | NA |
| 490 | 448.11 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 492 | 448.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 24 | 17 |
| 526 | 448.24 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 539 | 448.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 540 | 448.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 589 | 448.57 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 593 | 448.58 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 658 | 448.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 730 | 449.07 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 738 | 449.11 | humidity | 70.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 747 | 449.15 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 847 | 449.73 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 922 | 449.98 | humidity | 70.0 | 14400 | < th | dose independent | no | NA | NA |