Os01g0136700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0136700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.08 | 0.515 | 2.91 | 0.245 | 0.201 | 2.71 | 0.255 | -17 | -0.08 | 1.42 | 0.2257 | 103 | -- | -- |
| 123.05 | 0.517 | 2.94 | 0.182 | 0.189 | -1.87 | 0.16 | -- | -0.0697 | 2.02 | 4.148 | 26 | -- | -- |
| 119.94 | 0.51 | 2.91 | 0.23 | 0.202 | 2.51 | -- | -16.4 | -0.081 | 1.89 | 0.3708 | 112 | -- | -- |
| 123.04 | 0.517 | 2.94 | 0.156 | 0.195 | -1.92 | -- | -- | -0.0715 | 1.24 | 4.1 | 23 | -- | -- |
| 122.42 | 0.515 | 2.9 | 0.237 | -- | 2.52 | -- | -16.5 | -0.0754 | -- | 0.4979 | 113 | -- | -- |
| 129.87 | 0.534 | 2.95 | 0.239 | 0.215 | -- | 0.423 | -- | -0.0809 | 0.106 | -- | -- | -- | -- |
| 130.55 | 0.535 | 2.95 | 0.221 | 0.218 | -- | -- | -- | -0.0838 | 0.844 | -- | -- | -- | -- |
| 125.38 | 0.522 | 2.94 | 0.161 | -- | -1.99 | -- | -- | -0.0673 | -- | 4.534 | 23 | -- | -- |
| 123.67 | 0.518 | 2.95 | -- | 0.197 | -1.99 | -- | -- | -0.0885 | 1.29 | 4.318 | 23 | -- | -- |
| 133.52 | 0.54 | 2.94 | 0.229 | -- | -- | -- | -- | -0.0798 | -- | -- | -- | -- | -- |
| 131.84 | 0.537 | 2.95 | -- | 0.221 | -- | -- | -- | -0.108 | 0.888 | -- | -- | -- | -- |
| 126.05 | 0.523 | 2.94 | -- | -- | -2.06 | -- | -- | -0.0845 | -- | 4.59 | 23 | -- | -- |
| 134.9 | 0.542 | 2.95 | -- | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.71 | humidity | 80.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 2 | 114.28 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 4 | 115.20 | humidity | 80.0 | 720 | < th | dose independent | rect. | 14 | 4 |
| 7 | 115.72 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 2 |
| 14 | 116.08 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 15 | 116.11 | radiation | 1.0 | 720 | < th | dose independent | sin | 18 | NA |
| 17 | 116.14 | humidity | 80.0 | 720 | > th | dose independent | rect. | 13 | 6 |
| 19 | 116.20 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 28 | 116.30 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 8 |
| 37 | 116.43 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 6 |
| 48 | 116.59 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 11 |
| 63 | 116.84 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 65 | 116.87 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 3 |
| 66 | 116.88 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 68 | 116.90 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 10 | 14 |
| 73 | 116.93 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 13 | 11 |
| 79 | 116.95 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 5 |
| 82 | 116.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 102 | 117.02 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 5 |
| 142 | 117.19 | radiation | 10.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 201 | 117.48 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 202 | 117.49 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 13 |
| 224 | 117.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 6 |
| 228 | 117.59 | precipitation | 0.1 | 90 | > th | dose independent | sin | 17 | NA |
| 232 | 117.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 15 |
| 247 | 117.66 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 266 | 117.73 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 269 | 117.75 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 305 | 117.85 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 12 |
| 370 | 118.06 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 13 | 11 |
| 395 | 118.09 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 20 |
| 416 | 118.12 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 470 | 118.27 | radiation | 1.0 | 720 | > th | dose independent | sin | 18 | NA |
| 512 | 118.37 | radiation | 10.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 516 | 118.38 | radiation | 10.0 | 720 | > th | dose independent | rect. | 14 | 4 |
| 547 | 118.43 | humidity | 90.0 | 270 | > th | dose independent | rect. | 13 | 12 |
| 596 | 118.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 16 |
| 681 | 118.68 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 13 |
| 684 | 118.69 | precipitation | 0.1 | 90 | < th | dose independent | sin | 14 | NA |
| 690 | 118.69 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 14 | NA |
| 729 | 118.73 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 747 | 118.77 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 18 |
| 759 | 118.79 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 830 | 118.85 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 870 | 118.92 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 18 | NA |
| 895 | 118.96 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 22 |
| 927 | 119.00 | humidity | 90.0 | 270 | > th | dose independent | sin | 18 | NA |
| 929 | 119.00 | precipitation | 0.1 | 270 | < th | dose independent | sin | 16 | NA |
| 932 | 119.00 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 16 | NA |