Os01g0135900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytosolic class I small heat shock protein 3C (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0135900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cytosolic class I small heat shock protein 3C (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.62 | 0.369 | 13.8 | -1.72 | 0.814 | 0.829 | 1.89 | -3.87 | -0.238 | 7.36 | 20.33 | 1181 | -- | -- |
| 72.66 | 0.397 | 13.7 | -0.755 | 0.778 | 0.825 | 2.12 | -- | 0.0544 | 7.62 | 15.69 | 1054 | -- | -- |
| 67.31 | 0.382 | 13.8 | -1.53 | 1.03 | 0.893 | -- | -4.34 | -0.198 | 7.02 | 19 | 707 | -- | -- |
| 84.49 | 0.428 | 13.7 | -0.636 | 0.819 | 0.825 | -- | -- | 0.0493 | 7.21 | 14.49 | 1131 | -- | -- |
| 106.3 | 0.48 | 13.8 | -1.67 | -- | 0.78 | -- | -3.7 | -0.215 | -- | 20.38 | 1280 | -- | -- |
| 84.8 | 0.432 | 13.6 | -0.426 | 0.791 | -- | 2.06 | -- | 0.2 | 7.22 | -- | -- | -- | -- |
| 95.36 | 0.457 | 13.6 | -0.388 | 0.809 | -- | -- | -- | 0.193 | 6.7 | -- | -- | -- | -- |
| 117.61 | 0.505 | 13.7 | -0.825 | -- | 0.844 | -- | -- | -0.0386 | -- | 12.3 | 8568 | -- | -- |
| 93.7 | 0.451 | 13.6 | -- | 0.811 | 0.553 | -- | -- | 0.159 | 7.11 | 14.7 | 1127 | -- | -- |
| 129.54 | 0.532 | 13.6 | -0.369 | -- | -- | -- | -- | 0.209 | -- | -- | -- | -- | -- |
| 99.32 | 0.466 | 13.6 | -- | 0.804 | -- | -- | -- | 0.237 | 6.73 | -- | -- | -- | -- |
| 126.36 | 0.524 | 13.7 | -- | -- | 0.585 | -- | -- | 0.164 | -- | 13.12 | 1340 | -- | -- |
| 133.13 | 0.539 | 13.6 | -- | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 2 | 59.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 12 | 60.54 | temperature | 20 | 720 | > th | dose dependent | sin | 11 | NA |
| 14 | 60.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 22 | 61.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 9 |
| 42 | 61.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 53 | 61.48 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 69 | 61.54 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 71 | 61.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 148 | 62.02 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 188 | 62.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 15 |
| 205 | 62.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 220 | 62.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 295 | 62.77 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 296 | 62.77 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 309 | 62.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 313 | 62.81 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 333 | 62.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 361 | 62.87 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 369 | 62.89 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 386 | 62.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 388 | 62.94 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 425 | 63.00 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 427 | 63.00 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 442 | 63.03 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 452 | 63.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 462 | 63.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 481 | 63.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 561 | 63.18 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 592 | 63.22 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 701 | 63.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 744 | 63.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 777 | 63.47 | radiation | 20 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 790 | 63.50 | radiation | 10 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 822 | 63.55 | radiation | 40 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 827 | 63.56 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 836 | 63.57 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 855 | 63.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 923 | 63.66 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 932 | 63.68 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 1 |