Os01g0129500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1666 family protein.
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Os01g0129500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1666 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.55 | 0.59 | 7.53 | 0.368 | 2.08 | -1.44 | 1.18 | 1.28 | 0.00329 | 20.9 | 79.03 | 1322 | -- | -- |
| 159.65 | 0.588 | 7.55 | 0.285 | 2.09 | -1.34 | 1.21 | -- | -0.0117 | 20.9 | 79.53 | 1311 | -- | -- |
| 162.17 | 0.593 | 7.53 | 0.345 | 2.09 | -1.45 | -- | 1.48 | 0.0081 | 20.9 | 78.79 | 1300 | -- | -- |
| 164.84 | 0.598 | 7.55 | 0.223 | 2.08 | -1.31 | -- | -- | -0.00463 | 20.9 | 79.41 | 1323 | -- | -- |
| 396.61 | 0.928 | 7.47 | 0.288 | -- | -1.39 | -- | 1.32 | 0.0185 | -- | 83.77 | 1438 | -- | -- |
| 201.47 | 0.665 | 7.53 | 0.0186 | 2.04 | -- | 1.15 | -- | 0.0464 | 20.6 | -- | -- | -- | -- |
| 205.75 | 0.672 | 7.53 | -0.0184 | 2.04 | -- | -- | -- | 0.0462 | 20.6 | -- | -- | -- | -- |
| 399.02 | 0.93 | 7.49 | 0.148 | -- | -1.27 | -- | -- | 0.00197 | -- | 84.72 | 1443 | -- | -- |
| 165.91 | 0.6 | 7.55 | -- | 2.07 | -1.28 | -- | -- | -0.0263 | 20.9 | 80.23 | 1324 | -- | -- |
| 439.64 | 0.98 | 7.48 | -0.0252 | -- | -- | -- | -- | 0.0277 | -- | -- | -- | -- | -- |
| 205.76 | 0.671 | 7.53 | -- | 2.04 | -- | -- | -- | 0.0482 | 20.6 | -- | -- | -- | -- |
| 399.54 | 0.931 | 7.49 | -- | -- | -1.25 | -- | -- | -0.00768 | -- | 85.52 | 1450 | -- | -- |
| 439.66 | 0.979 | 7.48 | -- | -- | -- | -- | -- | 0.0305 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.34 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 3 | 158.19 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 4 | 158.23 | radiation | 10 | 1440 | > th | dose independent | sin | 14 | NA |
| 6 | 158.45 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 11 | 158.96 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 14 | 159.03 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 25 | 159.19 | humidity | 80 | 1440 | < th | dose dependent | sin | 0 | NA |
| 40 | 159.27 | humidity | 50 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 48 | 159.33 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 57 | 159.40 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 91 | 159.52 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 141 | 159.64 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 172 | 159.74 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 181 | 159.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 188 | 159.77 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 206 | 159.82 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 238 | 159.86 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 239 | 159.86 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 265 | 159.97 | radiation | 20 | 1440 | < th | dose dependent | sin | 15 | NA |
| 289 | 159.99 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 294 | 160.01 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 298 | 160.03 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 315 | 160.08 | radiation | 40 | 1440 | < th | dose dependent | rect. | 14 | 16 |
| 324 | 160.12 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 325 | 160.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 5 | 13 |
| 410 | 160.14 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 435 | 160.26 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 439 | 160.27 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 446 | 160.31 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 11 |
| 451 | 160.32 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 454 | 160.34 | radiation | 40 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 478 | 160.36 | radiation | 40 | 1440 | < th | dose dependent | rect. | 14 | 4 |
| 495 | 160.43 | radiation | 40 | 1440 | < th | dose dependent | rect. | 14 | 8 |
| 513 | 160.49 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 532 | 160.52 | radiation | 40 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 548 | 160.57 | radiation | 1 | 1440 | > th | dose dependent | sin | 15 | NA |
| 620 | 160.79 | radiation | 40 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 642 | 160.89 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 733 | 161.15 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 770 | 161.20 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 843 | 161.36 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 884 | 161.48 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 885 | 161.48 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 942 | 161.65 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 960 | 161.71 | radiation | 40 | 1440 | < th | dose independent | rect. | 14 | 13 |