Os01g0127400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0127400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.44 | 0.721 | 7.42 | -1.15 | 1.7 | -1.56 | -0.341 | 2.25 | -0.0599 | 23.8 | 5.251 | 6851 | -- | -- |
| 240.87 | 0.723 | 7.5 | -1.59 | 1.71 | -1.73 | -0.363 | -- | -0.137 | 23.7 | 7.923 | 7963 | -- | -- |
| 235.93 | 0.715 | 7.42 | -1.14 | 1.69 | -1.55 | -- | 2.25 | -0.0527 | 23.8 | 5.676 | 6919 | -- | -- |
| 239.94 | 0.721 | 7.51 | -1.63 | 1.71 | -1.71 | -- | -- | -0.194 | 23.8 | 8.795 | 6819 | -- | -- |
| 325 | 0.844 | 7.41 | -1.37 | -- | -2.92 | -- | 3.94 | -0.0733 | -- | 5.406 | 5981 | -- | -- |
| 288.37 | 0.796 | 7.6 | -2.49 | 1.62 | -- | -0.335 | -- | -0.623 | 23.7 | -- | -- | -- | -- |
| 288.85 | 0.796 | 7.6 | -2.48 | 1.62 | -- | -- | -- | -0.622 | 23.7 | -- | -- | -- | -- |
| 338.2 | 0.86 | 7.48 | -1.92 | -- | -2.84 | -- | -- | -0.223 | -- | 1.298 | 5975 | -- | -- |
| 272.7 | 0.769 | 7.39 | -- | 1.69 | -2.22 | -- | -- | 0.31 | 23.8 | 9.199 | 39796 | -- | -- |
| 454.75 | 0.996 | 7.56 | -2.43 | -- | -- | -- | -- | -0.602 | -- | -- | -- | -- | -- |
| 451.03 | 0.993 | 7.54 | -- | 1.59 | -- | -- | -- | -0.345 | 23.6 | -- | -- | -- | -- |
| 429.47 | 0.968 | 7.42 | -- | -- | -3.45 | -- | -- | 0.0573 | -- | -18.21 | 13202 | -- | -- |
| 610.96 | 1.15 | 7.5 | -- | -- | -- | -- | -- | -0.332 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.30 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 3 | 233.85 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 4 | 234.17 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 5 | 234.28 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 7 | 234.63 | temperature | 10 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 11 | 234.68 | temperature | 30 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 12 | 234.77 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 14 | 234.90 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 17 | 234.94 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 25 | 235.16 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 33 | 235.35 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 36 | 235.47 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 39 | 235.49 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 46 | 235.68 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 49 | 235.72 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 51 | 235.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 56 | 235.84 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 11 |
| 60 | 235.91 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 70 | 236.05 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 76 | 236.14 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 93 | 236.29 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 99 | 236.34 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 103 | 236.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 13 |
| 119 | 236.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 129 | 236.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 151 | 236.55 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 15 |
| 153 | 236.56 | temperature | 10 | 4320 | > th | dose dependent | sin | 0 | NA |
| 188 | 236.67 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 221 | 236.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 280 | 236.85 | temperature | 30 | 4320 | < th | dose dependent | sin | 0 | NA |
| 319 | 236.90 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 324 | 236.91 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 338 | 236.93 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 363 | 236.97 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 375 | 236.99 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 429 | 237.09 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 477 | 237.16 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 598 | 237.32 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 6 |
| 673 | 237.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 675 | 237.42 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 694 | 237.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 767 | 237.53 | temperature | 25 | 4320 | < th | dose dependent | rect. | 12 | 9 |
| 828 | 237.61 | radiation | 1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 857 | 237.63 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 871 | 237.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 880 | 237.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 941 | 237.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 947 | 237.74 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 977 | 237.75 | temperature | 30 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 992 | 237.77 | temperature | 30 | 4320 | < th | dose dependent | no | NA | NA |