Os01g0125800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nitrous oxide reductase, N-terminal domain containing protein.
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Os01g0125800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nitrous oxide reductase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.52 | 0.255 | 10.8 | 1.46 | 0.617 | 0.565 | -0.481 | -1.32 | 0.279 | 6.73 | 25.9 | 848 | -- | -- |
| 31.3 | 0.261 | 10.8 | 1.78 | 0.627 | 0.505 | -0.201 | -- | 0.38 | 6.63 | 25.9 | 832 | -- | -- |
| 29.96 | 0.255 | 10.8 | 1.49 | 0.574 | 0.555 | -- | -1.18 | 0.295 | 6.69 | 25.84 | 909 | -- | -- |
| 31.32 | 0.261 | 10.7 | 1.8 | 0.611 | 0.469 | -- | -- | 0.395 | 6.55 | 25.9 | 819 | -- | -- |
| 41.46 | 0.3 | 10.8 | 1.59 | -- | 0.544 | -- | -0.864 | 0.319 | -- | 25.6 | 1285 | -- | -- |
| 37.5 | 0.287 | 10.7 | 1.95 | 0.479 | -- | -0.255 | -- | 0.534 | 5.47 | -- | -- | -- | -- |
| 37.66 | 0.287 | 10.7 | 1.95 | 0.477 | -- | -- | -- | 0.535 | 5.46 | -- | -- | -- | -- |
| 42.65 | 0.304 | 10.8 | 1.82 | -- | 0.481 | -- | -- | 0.382 | -- | 25.6 | 1292 | -- | -- |
| 44.3 | 0.31 | 10.9 | -- | 0.468 | 1.52 | -- | -- | -0.0612 | 6.08 | 18.5 | 47520 | -- | -- |
| 49.53 | 0.329 | 10.7 | 1.96 | -- | -- | -- | -- | 0.547 | -- | -- | -- | -- | -- |
| 137.48 | 0.548 | 10.8 | -- | 0.51 | -- | -- | -- | 0.319 | 5.3 | -- | -- | -- | -- |
| 55.58 | 0.347 | 10.9 | -- | -- | 1.54 | -- | -- | -0.0448 | -- | 18.53 | 47520 | -- | -- |
| 151.07 | 0.574 | 10.8 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 16 |
| 7 | 27.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 9 |
| 10 | 27.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 24 | 27.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 9 |
| 78 | 27.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 10 |
| 103 | 28.00 | temperature | 10 | 10 | > th | dose dependent | sin | 13 | NA |
| 105 | 28.00 | temperature | 10 | 270 | > th | dose dependent | sin | 15 | NA |
| 110 | 28.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 125 | 28.09 | temperature | 15 | 720 | > th | dose dependent | sin | 19 | NA |
| 166 | 28.27 | temperature | 30 | 90 | < th | dose dependent | sin | 14 | NA |
| 175 | 28.29 | temperature | 30 | 10 | < th | dose dependent | sin | 13 | NA |
| 211 | 28.44 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 268 | 28.63 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 10 |
| 297 | 28.74 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 8 |
| 339 | 28.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 341 | 28.84 | temperature | 25 | 720 | > th | dose independent | sin | 20 | NA |
| 384 | 28.93 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 11 |
| 437 | 29.06 | temperature | 25 | 720 | < th | dose independent | sin | 20 | NA |
| 444 | 29.07 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 7 |
| 468 | 29.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 8 |
| 582 | 29.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 955 | 29.83 | temperature | 25 | 10 | < th | dose independent | rect. | 12 | 16 |
| 978 | 29.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 10 |