Os01g0121200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os01g0121200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 566.95 | 1.12 | 3.41 | 0.792 | 0.119 | -6.93 | -1.51 | -19.7 | -0.222 | 10.8 | 8.961 | 26 | -- | -- |
| 586.87 | 1.14 | 3.36 | 0.525 | 0.268 | 0.622 | -1.13 | -- | -0.254 | 12.9 | 9 | 25 | -- | -- |
| 573.01 | 1.11 | 3.41 | 0.723 | 0.273 | -6.18 | -- | -16.9 | -0.219 | 15.2 | 8.942 | 28 | -- | -- |
| 584.36 | 1.13 | 3.37 | 0.507 | 0.175 | -2.26 | -- | -- | -0.219 | 13.5 | 9.952 | 18 | -- | -- |
| 577.13 | 1.12 | 3.41 | 0.724 | -- | -6.39 | -- | -17 | -0.222 | -- | 8.921 | 27 | -- | -- |
| 588.32 | 1.14 | 3.35 | 0.562 | 0.263 | -- | -1.04 | -- | -0.243 | 13 | -- | -- | -- | -- |
| 591.09 | 1.14 | 3.36 | 0.529 | 0.329 | -- | -- | -- | -0.245 | 15.2 | -- | -- | -- | -- |
| 584.99 | 1.13 | 3.34 | 0.588 | -- | -2.34 | -- | -- | -0.205 | -- | 10.5 | 18 | -- | -- |
| 591.54 | 1.13 | 3.4 | -- | 0.276 | -1.9 | -- | -- | -0.309 | 14.7 | 10 | 31 | -- | -- |
| 597.21 | 1.14 | 3.36 | 0.515 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 598.46 | 1.14 | 3.37 | -- | 0.318 | -- | -- | -- | -0.304 | 15.2 | -- | -- | -- | -- |
| 593.91 | 1.14 | 3.35 | -- | -- | -2.32 | -- | -- | -0.218 | -- | 10.5 | 28 | -- | -- |
| 604.21 | 1.15 | 3.37 | -- | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 557.15 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 4 |
| 2 | 557.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 4 |
| 23 | 558.76 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 33 | 558.76 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 47 | 560.04 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 50 | 560.32 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 51 | 560.81 | wind | 9.0 | 30 | < th | dose dependent | rect. | 14 | 22 |
| 70 | 561.46 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 74 | 561.53 | wind | 5.0 | 30 | < th | dose independent | rect. | 14 | 22 |
| 75 | 561.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 77 | 562.16 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 78 | 562.38 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 80 | 562.74 | wind | 9.0 | 30 | < th | dose independent | sin | 1 | NA |
| 106 | 564.11 | wind | 7.0 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 127 | 565.23 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 22 |
| 134 | 565.48 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 10 |
| 145 | 565.86 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 151 | 566.02 | wind | 5.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 152 | 566.07 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 155 | 566.14 | wind | 5.0 | 10 | > th | dose independent | sin | 7 | NA |
| 159 | 566.17 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 164 | 566.25 | wind | 5.0 | 30 | > th | dose independent | rect. | 15 | 22 |
| 168 | 566.33 | wind | 3.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 170 | 566.38 | wind | 9.0 | 30 | > th | dose independent | rect. | 10 | 2 |
| 206 | 566.56 | wind | 5.0 | 30 | < th | dose independent | sin | 8 | NA |
| 207 | 566.59 | wind | 3.0 | 30 | > th | dose dependent | rect. | 15 | 22 |
| 211 | 566.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 22 |
| 213 | 566.68 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 242 | 567.04 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 243 | 567.06 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 247 | 567.08 | wind | 1.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 276 | 567.31 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 277 | 567.33 | wind | 5.0 | 30 | > th | dose independent | rect. | 23 | 14 |
| 282 | 567.37 | wind | 5.0 | 10 | < th | dose dependent | rect. | 19 | 17 |
| 286 | 567.38 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 10 |
| 300 | 567.48 | wind | 9.0 | 30 | > th | dose dependent | rect. | 10 | 2 |
| 330 | 567.51 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 362 | 567.58 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 372 | 567.68 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 383 | 567.72 | wind | 5.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 385 | 567.73 | wind | 3.0 | 10 | < th | dose independent | sin | 1 | NA |
| 388 | 567.74 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 393 | 567.79 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 397 | 567.80 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 403 | 567.84 | wind | 3.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 429 | 568.05 | wind | 1.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 433 | 568.07 | wind | 3.0 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 439 | 568.10 | wind | 3.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 457 | 568.14 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 467 | 568.19 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 505 | 568.33 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 545 | 568.35 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 561 | 568.38 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 594 | 568.48 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 595 | 568.48 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 599 | 568.48 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 605 | 568.49 | wind | 9.0 | 30 | > th | dose independent | sin | 6 | NA |
| 612 | 568.49 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 615 | 568.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 629 | 568.56 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 633 | 568.59 | wind | 1.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 668 | 568.61 | wind | 9.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 681 | 568.62 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 685 | 568.62 | wind | 5.0 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 688 | 568.63 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 736 | 568.68 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 738 | 568.68 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 740 | 568.69 | wind | 3.0 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 811 | 568.77 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 812 | 568.77 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 848 | 568.79 | wind | 9.0 | 30 | > th | dose independent | rect. | 17 | 19 |
| 886 | 568.84 | radiation | 40.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 931 | 568.86 | wind | 9.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 974 | 568.90 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 16 |
| 975 | 568.90 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 17 |