Os01g0118600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF563 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0118600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF563 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 294.85 | 0.807 | 3.87 | -2.2 | 0.655 | 1.9 | -1.63 | -6.66 | -0.513 | 17 | 24.71 | 1139 | -- | -- |
| 318.18 | 0.831 | 3.72 | -0.764 | 0.664 | 1.71 | -1.6 | -- | -0.238 | 17.7 | 8.748 | 1195 | -- | -- |
| 301.47 | 0.809 | 3.87 | -2.14 | 0.659 | 1.86 | -- | -6.37 | -0.502 | 17.3 | 24.79 | 1157 | -- | -- |
| 315.32 | 0.827 | 3.67 | -0.579 | 0.657 | 1.18 | -- | -- | -0.0535 | 17.7 | 25.5 | 1156 | -- | -- |
| 316.81 | 0.829 | 3.86 | -2.16 | -- | 1.81 | -- | -6.02 | -0.55 | -- | 24.24 | 1984 | -- | -- |
| 358.43 | 0.888 | 3.65 | -0.247 | 0.652 | -- | -1.47 | -- | 0.0479 | 18.5 | -- | -- | -- | -- |
| 363.31 | 0.893 | 3.65 | -0.23 | 0.65 | -- | -- | -- | 0.0418 | 19 | -- | -- | -- | -- |
| 325.29 | 0.84 | 3.69 | -0.599 | -- | 1.46 | -- | -- | -0.177 | -- | 23.18 | 740 | -- | -- |
| 322.82 | 0.837 | 3.63 | -- | 0.672 | 0.967 | -- | -- | 0.131 | 18 | 27.67 | 1196 | -- | -- |
| 385.55 | 0.918 | 3.64 | -0.242 | -- | -- | -- | -- | 0.03 | -- | -- | -- | -- | -- |
| 364.7 | 0.893 | 3.65 | -- | 0.652 | -- | -- | -- | 0.0674 | 19 | -- | -- | -- | -- |
| 334.09 | 0.851 | 3.66 | -- | -- | 1.34 | -- | -- | -0.0802 | -- | 23.54 | 728 | -- | -- |
| 387.1 | 0.918 | 3.63 | -- | -- | -- | -- | -- | 0.0569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 289.20 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 4 | 289.43 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 47 | 290.86 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 49 | 290.91 | wind | 5 | 43200 | > th | dose independent | sin | 16 | NA |
| 50 | 290.91 | wind | 5 | 43200 | < th | dose independent | sin | 16 | NA |
| 54 | 291.02 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 60 | 291.10 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 85 | 291.31 | wind | 5 | 43200 | < th | dose independent | sin | 21 | NA |
| 97 | 291.40 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 124 | 291.60 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 128 | 291.65 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 131 | 291.66 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 177 | 292.03 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 194 | 292.12 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 18 |
| 229 | 292.34 | wind | 3 | 43200 | > th | dose dependent | sin | 23 | NA |
| 338 | 292.88 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 351 | 292.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 356 | 292.96 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 19 |
| 433 | 293.23 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 537 | 293.74 | wind | 3 | 43200 | > th | dose dependent | no | NA | NA |
| 551 | 293.86 | wind | 3 | 43200 | > th | dose dependent | sin | 15 | NA |
| 604 | 294.25 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 622 | 294.29 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 624 | 294.30 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 637 | 294.37 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 657 | 294.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 674 | 294.65 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 8 |
| 688 | 294.76 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 689 | 294.76 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 737 | 295.05 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 754 | 295.19 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 784 | 295.42 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 789 | 295.44 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 909 | 296.09 | wind | 5 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 915 | 296.11 | wind | 9 | 43200 | < th | dose dependent | sin | 0 | NA |
| 924 | 296.17 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 990 | 296.49 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |