BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0118600 Os01g0118600|Os01g0118600
(560 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471 262 3e-70
AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385 258 5e-69
AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501 214 1e-55
AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505 213 3e-55
AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495 196 4e-50
AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453 189 4e-48
AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456 178 7e-45
>AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471
Length = 470
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 206/376 (54%), Gaps = 17/376 (4%)
Query: 189 CHLSGDVRVSPATSSVTLTMPLQQGEXXXXXXXXXXXXDDF-LLPLVREVAITSAASEGD 247
C +SGDVR+ +++V + D + VRE +
Sbjct: 105 CDVSGDVRIHGKSATVLAAVTFAFSGNSTWYMRPYARKDQVPAMKRVREWTV-KLVQNAS 163
Query: 248 APSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLFVANYKQWWIQK 307
C +H VPA++FS+GG++ N FHD D+++PLY T F G+VQ V N WI K
Sbjct: 164 LSRCVRNHSVPAILFSLGGFSLNNFHDFTDIVIPLYTTARRFSGEVQFLVTNKNLLWINK 223
Query: 308 YKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNPKG--YTMVDFTR 365
+K ++R+LS+ V+ D + + HCF VIVGL R RD + T +P Y+M DF +
Sbjct: 224 FKELVRKLSNYEVIYIDEEDETHCFSSVIVGLNRHRDY--DKELTTDPSNSEYSMSDFRK 281
Query: 366 FLRHAYGLRRDKPMVLGETSGKKPRMLIISRRRTRKLLNLRQVAAMARELXXXXXXXXXX 425
FLR Y LR T+ +KPR+LI+SR R+R +N ++A AR++
Sbjct: 282 FLRDTYSLRNS-----AVTTRRKPRILILSRSRSRAFVNAGEIARAARQIGFKVVVAEAN 336
Query: 426 XXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGRMEWMATNFYGA 485
FA VNSCDV++GVHGAG+TN FLP +V+QI+P G EW+A +
Sbjct: 337 TEIAS-----FAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILPIGGFEWLAKMDFEY 391
Query: 486 PAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWKALADIVMT-QDVKLNL 544
P+ M LRY+EY + AEES+L ++Y R+H RDP+A+ +GW + + Q+V +++
Sbjct: 392 PSKGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTFKSVYLVQQNVSVDI 451
Query: 545 RRFRPTLLRVLDLLQD 560
RF+ L++ L+LL +
Sbjct: 452 NRFKLVLVKALELLHN 467
>AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385
Length = 384
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 211/385 (54%), Gaps = 19/385 (4%)
Query: 184 ARPIVCHLSGDVRV--SPATSSVTLTMPLQQGEXXXXXXXXXXXXDDFLLPLVREVAITS 241
AR C L+GDVRV AT S +T G D + VRE +
Sbjct: 9 ARTEFCELNGDVRVHGKSATVSAAITFAFS-GNSTWHIRPYARKGDTVAMKRVREWTVKL 67
Query: 242 AASEGDAPSCNVS-----HGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLF 296
+ + N S H VPA+IFS+GGY+ N FHD D+++PLY T F G+VQ
Sbjct: 68 EQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFHDFTDIVIPLYTTARRFNGEVQFL 127
Query: 297 VANYKQWWIQKYKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNPK 356
V N WI K+K ++R+LS+ V+ D + + HCF V VGL R R+ + T +P
Sbjct: 128 VTNKSPSWINKFKELVRKLSNYEVIYIDEEDETHCFSSVTVGLTRHREYF--KELTIDPS 185
Query: 357 G--YTMVDFTRFLRHAYGLRRDKPMVLGETSGKKPRMLIISRRRTRKLLNLRQVAAMARE 414
Y+M DF FLR Y LR D + + ++PR+LI++R R+R +N ++A AR+
Sbjct: 186 NSEYSMSDFRSFLRDTYSLRND-AVATRQIRRRRPRILILARGRSRAFVNTGEIARAARQ 244
Query: 415 LXXXXXXXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGR 474
+ +FA VNSCDV++GVHGAGLTN FLP VV+Q++P G
Sbjct: 245 IGFKVVVAEANIGIA-----KFAQTVNSCDVMLGVHGAGLTNMVFLPENAVVIQVLPIGG 299
Query: 475 MEWMATNFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWKALADI 534
EW+A + P+ M LRY+EY +A EES+L ++Y R+H + RDP A+ GW+ +
Sbjct: 300 FEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYGRDHEIVRDPSAVAKHGWEMFKSV 359
Query: 535 VMT-QDVKLNLRRFRPTLLRVLDLL 558
+ Q+V +++ RF+P L++ L+LL
Sbjct: 360 YLVQQNVSIDINRFKPVLVKALELL 384
>AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501
Length = 500
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 198/391 (50%), Gaps = 31/391 (7%)
Query: 185 RPIVCHLSGDVRVSPATSSVTL-TMPLQQGEXXXXXXXXXXXXDDFLLPLVREV-AITSA 242
R +C + GDVR + A+SS+ L T + ++ V+E+ IT
Sbjct: 107 RSDICVMKGDVRTNSASSSIFLFTSSTNNNTKPEKIKPYTRKWETSVMDTVQELNLITKD 166
Query: 243 ASEGDAPSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLFVANYKQ 302
+++ C+V H VPAV FS GGYTGN +H+ D ++PL++T+ H+ KV + Y
Sbjct: 167 SNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVVFVIVEYHD 226
Query: 303 WWIQKYKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGL-VRDR-----DLILGQHPTRNPK 356
WW KY V+ +LS +VDF+ D HCF VGL + D L++G
Sbjct: 227 WWEMKYGDVVSQLSDYPLVDFNGDTRTHCFKEATVGLRIHDELTVNSSLVIGNQ------ 280
Query: 357 GYTMVDFTRFLRHAYGLRRDKPMVLGETSG--------KKPRMLIISRR-RTRKLLNLRQ 407
T+VDF L Y R + + ET KKP+++I+SR +R +LN
Sbjct: 281 --TIVDFRNVLDRGYS-HRIQSLTQEETEANVTALDFKKKPKLVILSRNGSSRAILNENL 337
Query: 408 VAAMARELXXXXXXXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVV 467
+ +A + R ++N+ DV++GVHGA +T+ FL V +
Sbjct: 338 LVELAEKTGFNVEVLRPQKTTEMAKIYR---SLNTSDVMIGVHGAAMTHFLFLKPKTVFI 394
Query: 468 QIVPWGRMEWMATNFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQG 527
QI+P G +W A +YG PA + L+YV Y +A +ESSL Y ++ V RDP +++ +G
Sbjct: 395 QIIPLG-TDWAAETYYGEPAKKLGLKYVGYKIAPKESSLYEEYGKDDPVIRDPDSLNDKG 453
Query: 528 WKALADIVMT-QDVKLNLRRFRPTLLRVLDL 557
W+ I + Q+VKL+LRRFR TL R D
Sbjct: 454 WEYTKKIYLQGQNVKLDLRRFRETLTRSYDF 484
>AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505
Length = 504
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 194/391 (49%), Gaps = 23/391 (5%)
Query: 184 ARPIVCHLSGDVRVSPATSSVTLTMPLQQGEXXXXXXX-XXXXXDDFLLPLVREVAITSA 242
+R VC + GDVR A+SSV L L+ + ++ V+E+ +
Sbjct: 102 SRSDVCIMKGDVRTHSASSSVFLFTSLKNKTKITKKIKPYTRKWETSVMQTVQELNLVYR 161
Query: 243 ASEGDA-------PSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQL 295
E ++ C+V + VPAV FS GGYTGN +H+ D ++PL++T+ HF KV
Sbjct: 162 DEENNSLVVSSVNDICDVFYNVPAVFFSTGGYTGNVYHEFNDGIIPLFITSHHFNKKVVF 221
Query: 296 FVANYKQWWIQKYKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNP 355
+ Y WWI KY ++ +LS VDF+ D HCF IVGL +L +
Sbjct: 222 VIVEYHSWWIMKYGDIVSQLSDYPPVDFNGDKRTHCFKEAIVGLKIHDELTVESSLMLGN 281
Query: 356 KGYTMVDFTRFLRHAY-----GLRRDKPMVLG---ETSGKKPRMLIISRRRTRKLLNLRQ 407
K T++DF L AY GL +++ + E KKP ++I+SR +R++LN
Sbjct: 282 K--TILDFRNVLDQAYWPRIHGLIQEEELKAANKTEDGFKKPILVILSRNGSREILNESL 339
Query: 408 VAAMARELXXXXXXXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVV 467
+ +A E+ R +NS DV++GVHGA +T+ FL V +
Sbjct: 340 LVELAEEIGFIVHVLRPDKTTELAKIYR---CLNSSDVMIGVHGAAMTHLLFLKPKTVFI 396
Query: 468 QIVPWGRMEWMATNFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQG 527
QI+P G EW A +YG PA M L+Y+ Y + +ESSL Y + + RDP + +G
Sbjct: 397 QIIPIG-TEWAAETYYGKPAKKMRLKYIGYKIKPKESSLYDEYGIDDPIIRDPKSFTQKG 455
Query: 528 WKALADIVMT-QDVKLNLRRFRPTLLRVLDL 557
W I + Q+VKL+L+RFR L R D
Sbjct: 456 WDYTKKIYLERQNVKLDLKRFRKPLSRAYDF 486
>AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495
Length = 494
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 189/384 (49%), Gaps = 21/384 (5%)
Query: 185 RPIVCHLSGDVRVSPATSSVTL--TMPLQQGEXXXXXXX-XXXXXDDFLLPLVREVAITS 241
R +C + GD+R +SS+ L + L + + ++ + E+ + +
Sbjct: 108 RSDICFMKGDIRTHSPSSSIFLYTSNDLTTDQVLQEKIKPYTRKWETSIMETIPELKLVT 167
Query: 242 AASE--GDAPSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLFVAN 299
+ GD C V H VPAV+FS GGYTGN +H+ D L+PLY+T+ F KV +A
Sbjct: 168 KDMKLFGDKRKCEVIHEVPAVLFSTGGYTGNLYHEFNDGLIPLYITSKRFNKKVVFVIAE 227
Query: 300 YKQWWIQKYKPVLRRLSHRAVVDFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNPKGYT 359
Y +WW KY VL +LS +++DF+ D HCF IVGL +L + ++ G T
Sbjct: 228 YHKWWEMKYGDVLSQLSDYSLIDFNKDKRTHCFKEAIVGLRIHGELTVDPSQMQD-DGTT 286
Query: 360 MVDFTRFLRHAYGLRRDKPMVLGET----------SGKKPRMLIISRRRTRKLLNLRQVA 409
+ +F L AY R ++ L E K+P++ + SR +R + N +
Sbjct: 287 INEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRRKAKRPKLALFSRTGSRGITNEDLMV 346
Query: 410 AMARELXXXXXXXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQI 469
MA+ + R +NS V+VGVHGA +T+ F+ G + +QI
Sbjct: 347 KMAQRIGFDIEVLRPDRTTELAKIYR---VLNSSKVMVGVHGAAMTHFLFMKPGSIFIQI 403
Query: 470 VPWGRMEWMATNFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWK 529
+P G +W A +YG PA + L Y Y + ESSL +Y ++ + +DP +I +GW+
Sbjct: 404 IPLG-TDWAAETYYGEPAKKLGLDYNGYKILPRESSLYEKYDKDDPILKDPNSITKKGWQ 462
Query: 530 ALADIVMT-QDVKLNLRRFRPTLL 552
I + Q V+L+L RF+ L+
Sbjct: 463 FTKGIYLNDQKVRLDLHRFKKLLI 486
>AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453
Length = 452
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 184/370 (49%), Gaps = 23/370 (6%)
Query: 188 VCHLSGDVRVSPATSSVTLTMPLQQGEXXXXXXXXXXXXDDFLLPLVREVAITSAASEGD 247
+C ++G + T ++TL P D++++P +RE+ +TS G
Sbjct: 79 LCSINGSCNLDLKTGTLTLMDP-TSAPLVEKIRPYPKKADNWIMPRIRELTLTSGPL-GL 136
Query: 248 APSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLTTFHFKGKVQLF--VANYKQWWI 305
SC+++H +PA++FS GGYTG+ +HD+ D +PL++T V N K+WW+
Sbjct: 137 PRSCDITHDLPAIVFSAGGYTGSIYHDLMDGFIPLFITANSVYPDRDFIPVVVNAKEWWM 196
Query: 306 QKYKPVLRRLS-HRAVV--DFDSDGDVHCFDHVIVGLVRDRDLILGQHPTRNPKGYTMVD 362
KY +L S H+ ++ D +S HCF IVGL+ + + PT+ P ++VD
Sbjct: 197 PKYIDILGTFSKHKPILLLDKESVATTHCFTSAIVGLITHWPMTID--PTQIPNSKSLVD 254
Query: 363 FTRFLRHAYGLRRDKPMVLGETSGKKPRMLIISRRRT--RKLLNLRQVAAMARELXXXXX 420
F L A+ P KPR++++SR R +LN +++ M ++
Sbjct: 255 FHNLLEKAFTTNISTP------KTHKPRLMLVSRYGNIGRVILNEQEIKEMLEDVGFEVI 308
Query: 421 XXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGRMEWMAT 480
K + S +VGVHGA LT+ FL G + VQ+VP G + W +
Sbjct: 309 IFRPSKTTNL---KEAYKLIKSSHGMVGVHGAALTHLLFLRPGSIFVQVVPLG-LGWASK 364
Query: 481 NFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWKA--LADIVMTQ 538
Y +PA M+L Y+EY V EESSL +Y R+ V +DP+A G W A + + Q
Sbjct: 365 PCYESPAKTMKLEYLEYKVNVEESSLIEKYNRDDLVLKDPIAYRGMDWNATKMKVYLKEQ 424
Query: 539 DVKLNLRRFR 548
DV L++ RFR
Sbjct: 425 DVSLDVNRFR 434
>AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456
Length = 455
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 183/376 (48%), Gaps = 33/376 (8%)
Query: 188 VCHLSGDVRVSPATSSVTL-------TMPLQQGEXXXXXXXXXXXXDDFLLPLVREVAIT 240
+C ++G ++P T ++TL + PL + +++++P +RE+ +T
Sbjct: 80 LCSINGSCILNPKTGTLTLMDRTLTTSAPLVE-----KIRPYPRKSENWIMPRIRELKLT 134
Query: 241 SAASEGDAPSCNVSHGVPAVIFSIGGYTGNFFHDMADVLVPLYLT--TFHFKGKVQLFVA 298
S S+ SC+++H PA++FS GGYTG+ +HD D +PL++T + + L V
Sbjct: 135 SGPSDL-TRSCDITHDSPAIVFSAGGYTGSIYHDFIDGFIPLFITANSVYPDRDFILVVV 193
Query: 299 NYKQWWIQKYKPVLRRLSHRAVVDFDSDGD--VHCFDHVIVGLVRDRDLILGQHPTRNPK 356
N K+WW+ KY +L S + D + HCF VGL+ + + PT+ P
Sbjct: 194 NPKEWWMPKYIDILGTFSKHKTILLDKENASITHCFTSATVGLISHGPMTID--PTQIPN 251
Query: 357 GYTMVDFTRFLRHAYGLRRDKPMVLGETSGKKPRMLIISRRRT--RKLLNLRQVAAMARE 414
++VDF L A L KPR++++ R R +LN ++ M +
Sbjct: 252 SKSLVDFHNLLDKALNPN------LSIIKINKPRLILVRRYGNIGRVILNEEEIREMLED 305
Query: 415 LXXXXXXXXXXXXXXXXXXKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGR 474
+ + + S ++GVHGA LT FL G V+VQIVP G
Sbjct: 306 VGFEVITFRPSKTTSLREAYKL---IKSSHGMIGVHGAALTQLLFLRPGSVLVQIVPVG- 361
Query: 475 MEWMATNFYGAPAAAMELRYVEYHVAAEESSLARRYPREHAVFRDPMAIHGQGWKA--LA 532
+ W++ + PA AM+L Y EY V EESSL +Y R+ V +DP+A G W +
Sbjct: 362 LGWVSKTCFETPAKAMKLDYTEYRVNVEESSLIEKYSRDDLVLKDPIAYRGMDWNVTKMK 421
Query: 533 DIVMTQDVKLNLRRFR 548
+ QDV+L++ RFR
Sbjct: 422 VYLKDQDVRLDVNRFR 437
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,701,444
Number of extensions: 421226
Number of successful extensions: 1058
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1028
Number of HSP's successfully gapped: 7
Length of query: 560
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 456
Effective length of database: 8,255,305
Effective search space: 3764419080
Effective search space used: 3764419080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)