Os01g0116500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0116500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.57 | 0.363 | 12.8 | 1.27 | 0.832 | -1.23 | -0.887 | -0.568 | 0.368 | 22.9 | 23.24 | 2189 | -- | -- |
| 60.07 | 0.361 | 12.8 | 1.22 | 0.841 | -1.06 | -0.821 | -- | 0.364 | 22.7 | 23.62 | 2409 | -- | -- |
| 62.73 | 0.369 | 12.8 | 1.25 | 0.839 | -1.18 | -- | -0.417 | 0.363 | 22.9 | 23 | 2421 | -- | -- |
| 62.92 | 0.369 | 12.8 | 1.21 | 0.832 | -1.12 | -- | -- | 0.383 | 22.9 | 23.04 | 2426 | -- | -- |
| 94.73 | 0.453 | 12.8 | 1.12 | -- | -1.52 | -- | 0.481 | 0.25 | -- | 27.53 | 851 | -- | -- |
| 80.03 | 0.419 | 12.7 | 1.61 | 0.902 | -- | -0.865 | -- | 0.599 | 23 | -- | -- | -- | -- |
| 83.2 | 0.427 | 12.7 | 1.65 | 0.906 | -- | -- | -- | 0.602 | 23 | -- | -- | -- | -- |
| 94.89 | 0.454 | 12.8 | 1.22 | -- | -1.55 | -- | -- | 0.265 | -- | 27.03 | 847 | -- | -- |
| 73.93 | 0.4 | 12.9 | -- | 0.879 | -1.45 | -- | -- | -0.0142 | 23 | 52.36 | 47520 | -- | -- |
| 134.28 | 0.541 | 12.7 | 1.67 | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
| 154.82 | 0.582 | 12.8 | -- | 0.921 | -- | -- | -- | 0.418 | 23.2 | -- | -- | -- | -- |
| 121.91 | 0.514 | 12.8 | -- | -- | -1.49 | -- | -- | -0.0225 | -- | 49.73 | 47520 | -- | -- |
| 207.76 | 0.673 | 12.7 | -- | -- | -- | -- | -- | 0.423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.19 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 8 | 60.61 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 13 |
| 9 | 60.64 | wind | 1 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 17 | 60.92 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 20 | 60.94 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 28 | 61.01 | wind | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 39 | 61.14 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 21 |
| 44 | 61.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 53 | 61.19 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 19 |
| 61 | 61.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 21 |
| 77 | 61.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 102 | 61.31 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 115 | 61.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 5 |
| 136 | 61.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 5 |
| 145 | 61.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 156 | 61.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 9 | 22 |
| 158 | 61.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 171 | 61.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 20 |
| 181 | 61.45 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 182 | 61.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 9 | 20 |
| 203 | 61.47 | temperature | 20 | 4320 | > th | dose independent | rect. | 6 | 22 |
| 219 | 61.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 9 | 22 |
| 229 | 61.49 | temperature | 20 | 4320 | > th | dose independent | rect. | 9 | 20 |
| 241 | 61.50 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 242 | 61.50 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 255 | 61.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 257 | 61.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 23 |
| 274 | 61.52 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 296 | 61.55 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 305 | 61.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 318 | 61.56 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 347 | 61.59 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 373 | 61.61 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 10 |
| 377 | 61.61 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 459 | 61.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 460 | 61.67 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 481 | 61.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 511 | 61.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 520 | 61.71 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 526 | 61.71 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 535 | 61.72 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 13 |
| 566 | 61.74 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 597 | 61.76 | wind | 3 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 615 | 61.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 632 | 61.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 634 | 61.78 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 10 |
| 647 | 61.79 | wind | 1 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 676 | 61.80 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 712 | 61.84 | wind | 3 | 14400 | < th | dose independent | sin | 4 | NA |
| 714 | 61.84 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 731 | 61.85 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 14 |
| 746 | 61.86 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 787 | 61.89 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 803 | 61.90 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 14 |
| 818 | 61.92 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 819 | 61.92 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 829 | 61.92 | wind | 3 | 14400 | < th | dose dependent | sin | 5 | NA |
| 852 | 61.94 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 910 | 61.97 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 911 | 61.97 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 912 | 61.97 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 927 | 61.98 | wind | 3 | 14400 | > th | dose independent | sin | 4 | NA |
| 974 | 62.00 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 989 | 62.01 | temperature | 20 | 4320 | > th | dose independent | sin | 4 | NA |