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Os01g0111400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, BED-type predicted domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.48 (0.0173) R2 : 0.536
β1 : 1.1 (0.0634) R2dD : 0.32 R2D : 0.255
β2 : 0.603 (0.0441) R2dC : 0.19 R2C : 0.189
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.286 (0.0369) R2dN8 : 0.0818 R2N8 : 0.0149
σ : 0.325
deviance : 48.25
__
_____
C
peak time of C : 4.05
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
40.87 0.3 9.48 1.19 0.609 0.578 -0.139 -0.841 0.323 2.18 80 828 -- --
42.17 0.302 9.48 1.13 0.626 0.592 0.0358 -- 0.316 2.2 80 857 -- --
40.93 0.298 9.48 1.19 0.616 0.585 -- -0.791 0.323 2.21 80.18 840 -- --
42.16 0.302 9.48 1.13 0.617 0.569 -- -- 0.313 2.3 80.42 854 -- --
48.02 0.323 9.48 1.14 -- 0.502 -- -0.372 0.319 -- 79.91 297 -- --
48.19 0.325 9.48 1.1 0.604 -- -0.141 -- 0.285 4.09 -- -- -- --
48.25 0.325 9.48 1.1 0.603 -- -- -- 0.286 4.05 -- -- -- --
48.54 0.324 9.48 1.12 -- 0.495 -- -- 0.314 -- 79.99 290 -- --
74.08 0.401 9.49 -- 0.679 0.628 -- -- 0.199 2.57 82 936 -- --
68.02 0.385 9.48 1.13 -- -- -- -- 0.302 -- -- -- -- --
80.3 0.419 9.51 -- 0.624 -- -- -- 0.163 4.02 -- -- -- --
79.4 0.415 9.51 -- -- 0.521 -- -- 0.186 -- 83 293 -- --
101.54 0.47 9.51 -- -- -- -- -- 0.177 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 39.71 humidity 80 720 > th dose independent rect. 10 19
8 40.02 humidity 80 1440 > th dose dependent rect. 10 4
12 40.25 humidity 80 720 < th dose independent rect. 10 16
19 40.30 humidity 80 720 > th dose independent rect. 10 12
23 40.34 humidity 80 720 < th dose independent rect. 10 12
31 40.38 wind 1 14400 < th dose independent rect. 1 2
42 40.47 humidity 70 1440 > th dose dependent rect. 11 2
72 40.67 humidity 80 720 < th dose independent sin 18 NA
78 40.71 wind 1 14400 > th dose independent rect. 1 2
91 40.85 humidity 80 720 > th dose independent sin 16 NA
101 40.89 humidity 80 720 > th dose independent sin 18 NA
107 40.91 humidity 80 1440 > th dose independent rect. 10 4
109 40.91 humidity 70 720 > th dose dependent rect. 10 20
122 40.98 humidity 70 720 > th dose dependent rect. 10 14
163 41.15 radiation 10 1440 < th dose dependent rect. 11 6
203 41.29 humidity 80 720 > th dose independent rect. 23 23
211 41.31 humidity 80 1440 < th dose independent rect. 10 4
234 41.37 radiation 10 1440 < th dose dependent rect. 15 2
248 41.42 humidity 80 720 > th dose independent no NA NA
251 41.42 humidity 70 720 > th dose dependent sin 19 NA
255 41.44 humidity 80 720 > th dose dependent sin 22 NA
258 41.45 humidity 80 720 < th dose independent rect. 19 23
262 41.46 humidity 80 720 > th dose independent rect. 3 23
269 41.47 humidity 80 720 > th dose independent rect. 17 23
271 41.48 radiation 10 1440 > th dose independent rect. 11 1
297 41.52 radiation 10 1440 < th dose dependent rect. 11 14
302 41.53 radiation 10 1440 < th dose dependent rect. 11 10
320 41.56 radiation 1 720 < th dose independent rect. 7 18
334 41.58 humidity 80 720 > th dose independent rect. 14 23
368 41.64 humidity 70 720 > th dose dependent rect. 2 22
380 41.66 humidity 80 720 < th dose independent rect. 3 23
391 41.67 humidity 80 720 < th dose independent rect. 24 22
405 41.68 radiation 10 1440 > th dose independent rect. 11 5
414 41.69 humidity 80 720 < th dose independent no NA NA
504 41.81 radiation 10 1440 > th dose independent rect. 11 7
542 41.86 humidity 70 720 > th dose dependent no NA NA
546 41.87 radiation 1 1440 < th dose independent rect. 8 4
550 41.87 radiation 1 1440 < th dose dependent rect. 8 4
554 41.87 humidity 70 720 > th dose dependent rect. 17 23
565 41.89 humidity 70 720 > th dose dependent rect. 23 23
578 41.91 humidity 80 720 < th dose independent rect. 13 23
580 41.92 wind 7 1440 > th dose independent rect. 2 6
582 41.92 humidity 50 720 > th dose dependent rect. 17 7
618 41.96 wind 7 1440 > th dose independent rect. 7 1
688 42.03 wind 3 4320 > th dose independent rect. 23 8
702 42.04 radiation 10 1440 < th dose dependent sin 17 NA
717 42.06 humidity 70 720 > th dose dependent rect. 13 23
728 42.08 radiation 1 1440 < th dose independent rect. 10 2
731 42.08 radiation 1 1440 < th dose dependent rect. 10 2
732 42.08 wind 7 1440 > th dose dependent rect. 4 6
751 42.10 radiation 1 720 < th dose dependent rect. 7 18
757 42.11 wind 7 1440 > th dose dependent rect. 7 3
767 42.12 radiation 1 1440 > th dose independent rect. 8 5
771 42.12 wind 7 1440 > th dose dependent rect. 9 1
792 42.15 wind 3 4320 < th dose independent rect. 23 8
820 42.18 humidity 80 90 > th dose dependent rect. 10 15
827 42.19 humidity 90 720 < th dose dependent rect. 15 8
850 42.22 humidity 90 1440 < th dose independent rect. 9 1
910 42.28 wind 3 4320 > th dose independent rect. 23 10
913 42.28 humidity 70 720 > th dose dependent rect. 18 3
931 42.30 radiation 1 720 < th dose independent sin 20 NA
961 42.32 radiation 1 720 < th dose independent rect. 7 12
963 42.32 radiation 1 720 < th dose dependent rect. 7 12
966 42.32 radiation 1 720 < th dose dependent rect. 21 22
967 42.33 wind 3 4320 < th dose independent rect. 23 6