Os01g0111300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0111300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.04 | 0.616 | 7.49 | 0.309 | 1.48 | 0.74 | -0.547 | -0.149 | 0.253 | 5.21 | 21.55 | 783 | -- | -- |
| 172.09 | 0.611 | 7.49 | 0.349 | 1.48 | 0.746 | -0.519 | -- | 0.263 | 5.21 | 21.54 | 787 | -- | -- |
| 172.73 | 0.612 | 7.49 | 0.328 | 1.48 | 0.754 | -- | -0.0663 | 0.258 | 5.26 | 21.53 | 787 | -- | -- |
| 172.74 | 0.612 | 7.49 | 0.344 | 1.48 | 0.759 | -- | -- | 0.26 | 5.26 | 21.51 | 787 | -- | -- |
| 280.07 | 0.779 | 7.51 | 0.341 | -- | 0.814 | -- | -0.0137 | 0.278 | -- | 21.6 | 1068 | -- | -- |
| 192.18 | 0.65 | 7.44 | 0.624 | 1.43 | -- | -0.715 | -- | 0.478 | 4.84 | -- | -- | -- | -- |
| 193.46 | 0.651 | 7.44 | 0.627 | 1.43 | -- | -- | -- | 0.481 | 4.91 | -- | -- | -- | -- |
| 276.03 | 0.774 | 7.51 | 0.424 | -- | 0.779 | -- | -- | 0.253 | -- | 24.4 | 1182 | -- | -- |
| 175.61 | 0.617 | 7.5 | -- | 1.48 | 0.843 | -- | -- | 0.201 | 5.3 | 21.57 | 799 | -- | -- |
| 301.42 | 0.811 | 7.46 | 0.68 | -- | -- | -- | -- | 0.518 | -- | -- | -- | -- | -- |
| 203.84 | 0.668 | 7.46 | -- | 1.44 | -- | -- | -- | 0.411 | 4.89 | -- | -- | -- | -- |
| 278.88 | 0.778 | 7.53 | -- | -- | 0.931 | -- | -- | 0.139 | -- | 24.4 | 1262 | -- | -- |
| 313.62 | 0.827 | 7.47 | -- | -- | -- | -- | -- | 0.443 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.43 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 12 | 160.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 15 | 160.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 33 | 161.27 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 2 |
| 110 | 163.53 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 138 | 164.03 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 3 |
| 202 | 165.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 298 | 166.50 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 443 | 168.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 489 | 169.00 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 513 | 169.20 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 613 | 169.99 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 633 | 170.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 639 | 170.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 700 | 170.64 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 14 |
| 735 | 170.84 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 782 | 171.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 783 | 171.13 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 810 | 171.22 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 811 | 171.22 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 817 | 171.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 901 | 171.46 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 902 | 171.46 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 16 |
| 909 | 171.47 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 946 | 171.58 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 978 | 171.61 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |