Os01g0108200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE).
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Os01g0108200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.8 | 0.181 | 9.79 | -0.0693 | 0.0705 | 0.363 | -0.711 | 0.16 | -0.0654 | 6.55 | 1010 | 7175 | -- | -- |
| 14.7 | 0.179 | 9.79 | -0.0335 | 0.0746 | 0.36 | -0.674 | -- | -0.0587 | 6.45 | 1012 | 7216 | -- | -- |
| 15.83 | 0.185 | 9.79 | -0.0521 | 0.0585 | 0.36 | -- | 0.133 | -0.0624 | 8.31 | 1012 | 7879 | -- | -- |
| 15.88 | 0.186 | 9.79 | -0.0281 | 0.0704 | 0.345 | -- | -- | -0.0568 | 8.3 | 1012 | 7895 | -- | -- |
| 16.09 | 0.187 | 9.79 | -0.0617 | -- | 0.36 | -- | 0.134 | -0.064 | -- | 1012 | 7866 | -- | -- |
| 18.8 | 0.203 | 9.81 | -0.198 | 0.0632 | -- | -0.699 | -- | -0.146 | 6.44 | -- | -- | -- | -- |
| 19.95 | 0.209 | 9.81 | -0.206 | 0.0683 | -- | -- | -- | -0.143 | 8.4 | -- | -- | -- | -- |
| 16.15 | 0.187 | 9.79 | -0.0281 | -- | 0.344 | -- | -- | -0.0562 | -- | 1012 | 7907 | -- | -- |
| 15.89 | 0.186 | 9.79 | -- | 0.0704 | 0.355 | -- | -- | -0.0521 | 8.32 | 1012 | 7878 | -- | -- |
| 20.21 | 0.21 | 9.81 | -0.206 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 21.06 | 0.215 | 9.8 | -- | 0.0675 | -- | -- | -- | -0.12 | 8.63 | -- | -- | -- | -- |
| 16.17 | 0.187 | 9.79 | -- | -- | 0.354 | -- | -- | -0.0514 | -- | 1012 | 7897 | -- | -- |
| 21.32 | 0.216 | 9.8 | -- | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.03 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 2 | 14.07 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 3 | 14.07 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 4 | 14.08 | wind | 7 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 5 | 14.09 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 6 | 14.10 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 7 | 14.11 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 12 |
| 8 | 14.11 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 11 | 14.12 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 62 | 14.20 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 5 |
| 68 | 14.21 | wind | 7 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 218 | 14.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 220 | 14.29 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 4 | NA |
| 222 | 14.29 | atmosphere | 1015 | 14400 | < th | dose dependent | sin | 5 | NA |
| 508 | 14.37 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 627 | 14.39 | atmosphere | 1015 | 14400 | < th | dose dependent | no | NA | NA |
| 715 | 14.40 | atmosphere | 995 | 14400 | > th | dose dependent | no | NA | NA |
| 763 | 14.40 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 827 | 14.41 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 883 | 14.43 | wind | 7 | 14400 | < th | dose independent | sin | 12 | NA |
| 970 | 14.45 | wind | 7 | 14400 | > th | dose independent | sin | 12 | NA |