BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0108200 Os01g0108200|AK071405
(730 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76140.1 | chr1:28571187-28574852 FORWARD LENGTH=796 1117 0.0
AT1G20380.1 | chr1:7061665-7065047 FORWARD LENGTH=732 1071 0.0
AT1G50380.1 | chr1:18662480-18666185 FORWARD LENGTH=711 193 3e-49
AT1G69020.1 | chr1:25943949-25947197 REVERSE LENGTH=758 124 2e-28
AT5G66960.1 | chr5:26736209-26739493 REVERSE LENGTH=793 83 5e-16
AT5G36210.1 | chr5:14248202-14253272 REVERSE LENGTH=731 54 3e-07
>AT1G76140.1 | chr1:28571187-28574852 FORWARD LENGTH=796
Length = 795
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/722 (71%), Positives = 620/722 (85%), Gaps = 1/722 (0%)
Query: 10 RLSYPPTRRDNSVVDMYHGVPVADPYRWLEDPESEDTKEFVASQVELAESVLAGCFDREN 69
+L YP TRRD+SVVD YHGV + DPYRWLEDP++E+ KEFV SQV+L +SVL C +E
Sbjct: 74 QLQYPATRRDDSVVDDYHGVKIGDPYRWLEDPDAEEVKEFVQSQVKLTDSVLEKCETKEK 133
Query: 70 LRREVTRLFDHPRHGAPFRRGNKYFYFHNSGLQAQSVLYVQDSLDGEAEVLLDPNALSKD 129
LR+ +T+L DHPR+ +PFR+G+KYFYFHN+GLQAQSVLY+QD+LD E EVLLDPN LS D
Sbjct: 134 LRQNITKLIDHPRYDSPFRQGDKYFYFHNTGLQAQSVLYMQDNLDAEPEVLLDPNTLSDD 193
Query: 130 GTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKFSSISWTHDG 189
GTVAL+T+SVS+D KY+AYGLS SGSDWVTI++M I DK+ D LSWVKF+ I+WTHD
Sbjct: 194 GTVALNTFSVSEDAKYLAYGLSSSGSDWVTIKLMKIEDKKVEPDTLSWVKFTGITWTHDS 253
Query: 190 KGFFYGRYPAPREVE-LDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPEHPKYSFGAS 248
KGFFYGRYPAP+E E +DAGTETN NL HE+YYH +G+DQS+DILCW+D E+PKY FGA
Sbjct: 254 KGFFYGRYPAPKEGEDIDAGTETNSNLYHELYYHFIGTDQSQDILCWRDNENPKYMFGAE 313
Query: 249 VTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLIDNFDAQYHVV 308
VT+DGKY+I+ E CDPVNKLYYC++ +L G+E F+ + LPF+KL+D FDAQY V+
Sbjct: 314 VTDDGKYLIMSIGESCDPVNKLYYCDMTSLSGGLESFRGSSSFLPFIKLVDTFDAQYSVI 373
Query: 309 ANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNGNQLLVCYMS 368
+ND FTFLTN++APK KLVRVD+K+P WTD++ EHE+DVL SA AVNGN L+ CYMS
Sbjct: 374 SNDETLFTFLTNKDAPKYKLVRVDLKEPNSWTDVVEEHEKDVLASACAVNGNHLVACYMS 433
Query: 369 DVKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSA 428
DVKHILQIRDL +G+LLH+LPL+IGSVS++S RR+D F FTSFL+PG+IY+C+L +
Sbjct: 434 DVKHILQIRDLKSGSLLHQLPLDIGSVSDVSARRKDNTFFFSFTSFLTPGVIYKCDLANE 493
Query: 429 IPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGG 488
PE+K+FRE++VPGFDR F+ Q+F SKDGTKIPMFI++K+DI+LDGSHP LLY YGG
Sbjct: 494 SPEVKVFREVTVPGFDREAFQAIQVFYPSKDGTKIPMFIVAKKDIKLDGSHPCLLYAYGG 553
Query: 489 FNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAE 548
FNIS+TPSFS SR+VL K++G V C ANIRGGGEYGEEWHKAG+ A KQNCFDDFI+ AE
Sbjct: 554 FNISITPSFSASRIVLSKHLGVVFCFANIRGGGEYGEEWHKAGSLAKKQNCFDDFISGAE 613
Query: 549 LLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAW 608
L+SAGYT +LCIEGGSNGGLL+ AC+NQRPDL+GCALAHVGVMDMLRFHKFTIGHAW
Sbjct: 614 YLVSAGYTQPSKLCIEGGSNGGLLVGACINQRPDLYGCALAHVGVMDMLRFHKFTIGHAW 673
Query: 609 TTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLK 668
T+DYGCS+NEEEFHWLIKYSPLHNV+RPWEQ + QYP+ MLLTADHDDRVVPLHSLK
Sbjct: 674 TSDYGCSENEEEFHWLIKYSPLHNVKRPWEQQTDHLVQYPSTMLLTADHDDRVVPLHSLK 733
Query: 669 LLATLQYVLCTSIEDTPQVNPIIGRIDVKSGHGAGRPTKKMIDEVADRYSFMANMLDASW 728
LLATLQ+VLCTS++++PQ+NPIIGRI+VK+GHGAGRPT+KMIDE ADRYSFMA M++ASW
Sbjct: 734 LLATLQHVLCTSLDNSPQMNPIIGRIEVKAGHGAGRPTQKMIDEAADRYSFMAKMVNASW 793
Query: 729 TE 730
TE
Sbjct: 794 TE 795
>AT1G20380.1 | chr1:7061665-7065047 FORWARD LENGTH=732
Length = 731
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/731 (68%), Positives = 605/731 (82%), Gaps = 1/731 (0%)
Query: 1 MGSVAGDAARLSYPPTRRDNSVVDMYHGVPVADPYRWLEDPESEDTKEFVASQVELAESV 60
MGS+ RL YP RRD SVV+ YHGV V+DPYRWLEDP++E+ KEFV QV+L++SV
Sbjct: 1 MGSLPAFEERLQYPTARRDESVVEDYHGVKVSDPYRWLEDPDAEEVKEFVEKQVQLSDSV 60
Query: 61 LAGCFDRENLRREVTRLFDHPRHGAPFRRGNKYFYFHNSGLQAQSVLYVQDSLDGEAEVL 120
L C +E L + T+ D+PR PF+RGN YFYFHNSGLQAQSVL+VQD L+ EAE+L
Sbjct: 61 LKSCETKEKLHDKFTKFIDYPRFDTPFKRGNSYFYFHNSGLQAQSVLHVQDDLESEAEIL 120
Query: 121 LDPNALSKDGTVALSTYSVSKDGKYIAYGLSESGSDWVTIRVMNIADKQTLSDKLSWVKF 180
LDPN LS DGTV+L+T S+S+D KY+AYGLS SGSDWVTI+VM I DK+ D LSWVKF
Sbjct: 121 LDPNTLSDDGTVSLNTLSISEDAKYLAYGLSSSGSDWVTIKVMKIEDKKVEPDSLSWVKF 180
Query: 181 SSISWTHDGKGFFYGRYPAPREVE-LDAGTETNINLNHEIYYHVVGSDQSEDILCWKDPE 239
S I+WTHDGKGFFY RYPAPRE E +DAGTETN NL HE+YYH +G+DQSED+LCW+D +
Sbjct: 181 SGITWTHDGKGFFYSRYPAPREGEKIDAGTETNSNLYHELYYHFLGTDQSEDVLCWRDQD 240
Query: 240 HPKYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGIEGFKETKGMLPFVKLID 299
+PK+ FG+ VT+DGKY+I+ EGCDPVNK+Y+C++ LP+G+EGF+ + +LPFVKLID
Sbjct: 241 NPKHMFGSKVTDDGKYLIMSIEEGCDPVNKVYHCDLSLLPKGLEGFRGSNTLLPFVKLID 300
Query: 300 NFDAQYHVVANDGDEFTFLTNRNAPKNKLVRVDIKKPELWTDILPEHERDVLESADAVNG 359
FDAQY +AND FTFLTN++APK K+VRVD+K+P WTD++ EHE+DVL +A AVNG
Sbjct: 301 TFDAQYIAIANDETLFTFLTNKDAPKYKVVRVDLKEPSSWTDVIAEHEKDVLSTASAVNG 360
Query: 360 NQLLVCYMSDVKHILQIRDLVTGNLLHKLPLEIGSVSEISCRREDMDVFIGFTSFLSPGI 419
+QL+V YMSDVKHILQIRDL +G+LLH LP++IGSV + RR+D F FTSFL+PG+
Sbjct: 361 DQLVVSYMSDVKHILQIRDLKSGSLLHGLPVDIGSVCGVFARRKDTTFFFRFTSFLTPGV 420
Query: 420 IYRCNLTSAIPEMKIFREISVPGFDRTNFEVKQIFVNSKDGTKIPMFIMSKRDIELDGSH 479
IY C+L+ PE+ +FREI VPGFDRT F+V Q+F SKDGT IPMFI++++DI+LDGSH
Sbjct: 421 IYICDLSHEAPEVTVFREIGVPGFDRTAFQVTQVFYPSKDGTDIPMFIVARKDIKLDGSH 480
Query: 480 PTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNC 539
P LLY YGGF+IS+TP FS +R+VL +++G V C ANIRGGGEYGEEWHK+GA A KQNC
Sbjct: 481 PCLLYAYGGFSISMTPFFSATRIVLGRHLGTVFCFANIRGGGEYGEEWHKSGALANKQNC 540
Query: 540 FDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRF 599
FDDFI+ AE L+SAGYT R+LCIEGGSNGG+L+ AC+NQRPDLFGCALAHVGVMDMLRF
Sbjct: 541 FDDFISGAEYLVSAGYTQPRKLCIEGGSNGGILVGACINQRPDLFGCALAHVGVMDMLRF 600
Query: 600 HKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDD 659
HKFTIGHAWT+++GCSD EEEFHWLIKYSPLHNV+RPWEQ QYP+ MLLTADHDD
Sbjct: 601 HKFTIGHAWTSEFGCSDKEEEFHWLIKYSPLHNVKRPWEQKTDLFFQYPSTMLLTADHDD 660
Query: 660 RVVPLHSLKLLATLQYVLCTSIEDTPQVNPIIGRIDVKSGHGAGRPTKKMIDEVADRYSF 719
RVVPLHS KLLAT+QY L S+E++PQ NPII RI+VK+GHGAGRPT+KMIDE ADRYSF
Sbjct: 661 RVVPLHSYKLLATMQYELGLSLENSPQTNPIIARIEVKAGHGAGRPTQKMIDEAADRYSF 720
Query: 720 MANMLDASWTE 730
MA M+DASW +
Sbjct: 721 MAKMVDASWID 731
>AT1G50380.1 | chr1:18662480-18666185 FORWARD LENGTH=711
Length = 710
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 192/759 (25%), Positives = 328/759 (43%), Gaps = 97/759 (12%)
Query: 8 AARLSYPPTRRDNSVVDMYHGVPVADPYRWLEDPE--SEDTKEFVASQVELAESVLAGCF 65
A S P ++ V++M+ V V D Y WL D + D ++ + + V++G
Sbjct: 2 AESRSPPVAKKVEHVMEMFGDVRV-DNYYWLRDDSRTNPDMLSYLREENHYTDFVMSGTK 60
Query: 66 DREN-LRREVTRLFDHPRHGAPFRRGNKYFYFHNSGLQAQSVLYVQDS----LDGEAE-- 118
EN L E+ AP R+G Y+Y N LQ + Y+Q D +AE
Sbjct: 61 QFENQLFAEIRGRIKEDDISAPLRKGPYYYYEKN--LQGKE--YIQHCRRLITDNKAEPS 116
Query: 119 ---------------VLLDPNALSKD-GTVALSTYSVSKDGKYIAYGLSESGSDWVTIRV 162
V+LD N +++ + + S D K +AY G + T+ V
Sbjct: 117 VYDTMPTGPDAPPEHVILDENTKAQEHDYYRIGAFKASPDHKLVAYAEDTKGDEIYTVNV 176
Query: 163 MNIADKQTLSDKLSWVKFSSISWTHDGKGFFYGRYPAPREVELDAGTETNINLNHEIYYH 222
++ + + +L + S + W + + T I +++ H
Sbjct: 177 IDSEALKPVGQQLKGLT-SYLEWAGNDALLYI--------------TMDEILRPDKVWLH 221
Query: 223 VVGSDQSEDILCWKDPEHPKYSFGASVTEDGKYIILGTYEGCDPVNKLYYCEICTLPQGI 282
+G++QS D+ C + +S +E KY+ + + + +
Sbjct: 222 KLGTEQSSDV-CLYHEKDDMFSLELHASESHKYLFVASE-----------SKTTRFVFSL 269
Query: 283 EGFKETKGMLPFVKLIDNFDAQYHVVANDGDEFTFLTNRNAP--KNKLVRVDIKKPELWT 340
+ K G+ +D D+ V++ G+ F F+ R+ ++L+ + T
Sbjct: 270 DVSKTQDGLRVLTPRVDGIDSS---VSHRGNHF-FIQRRSTEFYNSELIACPVDDTSKTT 325
Query: 341 DILPEHE----------RDVLESADAVNGNQLLVCYMSDVKHILQIRDLVTGNLLHKLPL 390
+LP E RD L + NG Q + + + Q + + G
Sbjct: 326 VLLPHRESVKIQEIQLFRDHLAVFERENGLQKITVHRLPAEG--QPLEGLQGGRNVSFVD 383
Query: 391 EIGSVSEISCRREDMDVFIGFTSFLSPGIIYRCNLTSAIPEMKIFREISVPGFDRTNFEV 450
+ SV + + S +P +Y ++ S +K + + GFD +N+
Sbjct: 384 PVYSVDSTESEFSSRVLRFKYCSMKTPPSVYDYDMDSGTSVVKKIDTV-LGGFDASNYVT 442
Query: 451 KQIFVNSKDGTKIPMFIM-SKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMG 509
++ +V + DGT+IPM I+ +K+ +LDGS P LLYGYG + IS+ P F SR+ L + G
Sbjct: 443 ERKWVAASDGTQIPMSIVYNKKLAKLDGSDPLLLYGYGSYEISVDPYFKASRLSLL-DRG 501
Query: 510 FVVCVANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNG 569
F +A++RGGGE G +W++ G K+N F DFIACAE LI Y S +LC+EG S G
Sbjct: 502 FTFVIAHVRGGGEMGRQWYENGKLLKKKNTFTDFIACAERLIELKYCSKEKLCMEGRSAG 561
Query: 570 GLLIAACVNQRPDLFGCALAHVGVMDMLRFH---KFTIGHAWTTDYGCSDNEEEFHWLIK 626
GLL+ A VN RPDLF +A V +D+L + + ++G EE + ++
Sbjct: 562 GLLMGAVVNMRPDLFKVVIAGVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKS 621
Query: 627 YSPLHNVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLATLQYVLCTSIEDTPQ 686
YSP+ N V YP +++ +D RV+ K +A L+ E
Sbjct: 622 YSPVDN---------VTAQNYPNMLVTAGLNDPRVMYSEPGKWVAKLR-------EMKTD 665
Query: 687 VNPIIGRIDVKSGHGAGRPTKKMIDEVADRYSFMANMLD 725
N ++ + ++ +GH + + + E A ++FM +LD
Sbjct: 666 NNVLLFKCELGAGHFSKSGRFEKLQEDAFTFAFMMKVLD 704
>AT1G69020.1 | chr1:25943949-25947197 REVERSE LENGTH=758
Length = 757
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 17/273 (6%)
Query: 455 VNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCV 514
V+S DG ++P+ I+ R+ P +L GYG + L S+ +R+ + + G+V+
Sbjct: 493 VSSHDGVEVPLTILYSREAWKKSESPGMLIGYGAYGEVLDKSWCTNRLSML-DRGWVIAF 551
Query: 515 ANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIA 574
A++RGGG WHK+G R++KQN DFI A+ L+ GY L G S G +L A
Sbjct: 552 ADVRGGGSGEFSWHKSGTRSLKQNSIQDFIYSAKYLVEKGYVHRHHLAAVGYSAGAILPA 611
Query: 575 ACVNQRPDLFGCALAHVGVMDMLRF---HKFTIGHAWTTDYGCSDNEEEFHWLIKYSPLH 631
A +N P LF + V +D+L + ++G DN+ +F ++ YSP
Sbjct: 612 AAMNMHPSLFQAVILKVPFVDVLNTLSDPNLPLTLLDHEEFGNPDNQTDFGSILSYSPYD 671
Query: 632 NVRRPWEQSFVNCCQYPAIMLLTADHDDRVVPLHSLKLLATLQYVLCTSIEDTPQVNPII 691
+R+ + C YP++++ T+ HD RV K +A ++ C +I
Sbjct: 672 KIRK-------DVC-YPSMLVTTSFHDSRVGVWEGAKWVAKIRDSTCHDCS-----RAVI 718
Query: 692 GRIDVKSGHGAGRPTKKMIDEVADRYSFMANML 724
+ ++ GH +E A Y+F+ ++
Sbjct: 719 LKTNMNGGHFGEGGRYAQCEETAFDYAFLLKVM 751
>AT5G66960.1 | chr5:26736209-26739493 REVERSE LENGTH=793
Length = 792
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 455 VNSKDGTKIPMFIMSKRDIELDGSHPTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCV 514
V+S DG +P+ I+ R + + P LL+ +G + L + S + + G+V+
Sbjct: 536 VSSHDGAMVPLSIVYSRAQKEENQKPGLLHVHGAYGEMLDKRWR-SELKSLLDRGWVLAY 594
Query: 515 ANIRGGGEYGEEWHKAGARAMKQNCFDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIA 574
A++RGGG G++WH+ G A K N D+I CA+ L+ +L G S GGL++A
Sbjct: 595 ADVRGGGGKGKKWHQDGRGAKKLNSIKDYIQCAKYLVENNIVEENKLAGWGYSAGGLVVA 654
Query: 575 ACVNQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTTDY---GCSDNEEEFHWLIKYSPLH 631
+ +N PDLF A+ V +D + I DY G + +FH + +YSP
Sbjct: 655 SAINHCPDLFQAAVLKVPFLDPTHTLIYPILPLTAEDYEEFGYPGDINDFHAIREYSPYD 714
Query: 632 NVRRPWEQSFVNCCQYPAIMLLTA 655
N+ + YPA+++ ++
Sbjct: 715 NIPKD--------VLYPAVLVTSS 730
>AT5G36210.1 | chr5:14248202-14253272 REVERSE LENGTH=731
Length = 730
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 19/197 (9%)
Query: 480 PTLLYGYGGFNISLTPSFSVSRVVLCKNMGFVVCVANIRGGGEYGEEWHKAGARAMKQNC 539
P L+ +GG S +++ + + G+ N G YG E+ + R
Sbjct: 493 PLLVKSHGGPTAESRGSLNLN-IQYWTSRGWAFVDVNYGGSTGYGREYRERLLRQWGIVD 551
Query: 540 FDDFIACAELLISAGYTSYRQLCIEGGSNGGLLIAACVNQRPDLFGCALAHVGVMDMLRF 599
DD CA+ L+S+G ++LCI GGS GG A + R D+F + GV D+
Sbjct: 552 VDDCCGCAKYLVSSGKADVKRLCISGGSAGGYTTLASLAFR-DVFKAGASLYGVADLKML 610
Query: 600 HKFTIGHAWTTDY--GCSDNEEEFHWLIKYSPLHNVRRPWEQSFVNCCQYPAIMLLTADH 657
+ GH + + Y +E++F+ + SP++ FV+ P I+L
Sbjct: 611 KE--EGHKFESRYIDNLVGDEKDFY---ERSPIN---------FVDKFSCP-IILFQGLE 655
Query: 658 DDRVVPLHSLKLLATLQ 674
D V P S K+ L+
Sbjct: 656 DKVVTPDQSRKIYEALK 672
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,609,560
Number of extensions: 806296
Number of successful extensions: 1592
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1584
Number of HSP's successfully gapped: 6
Length of query: 730
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 624
Effective length of database: 8,200,473
Effective search space: 5117095152
Effective search space used: 5117095152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)