Os01g0107900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0107900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.83 | 0.277 | 13.7 | -0.844 | 0.782 | -0.0836 | 0.0686 | -2.55 | -0.379 | 21.5 | 29.9 | 4383 | -- | -- |
| 36.19 | 0.28 | 13.8 | -1.3 | 0.826 | -0.301 | 0.0674 | -- | -0.46 | 21.3 | 29.4 | 5924 | -- | -- |
| 34.76 | 0.275 | 13.7 | -0.845 | 0.778 | -0.115 | -- | -2.4 | -0.378 | 21.5 | 29.62 | 4384 | -- | -- |
| 35.6 | 0.278 | 13.8 | -1.29 | 0.783 | -0.301 | -- | -- | -0.465 | 21.6 | 29.2 | 5888 | -- | -- |
| 69.64 | 0.389 | 13.7 | -0.786 | -- | -0.187 | -- | -2.23 | -0.346 | -- | 29.4 | 4955 | -- | -- |
| 40.73 | 0.299 | 13.7 | -1.21 | 0.792 | -- | 0.087 | -- | -0.459 | 21.7 | -- | -- | -- | -- |
| 40.76 | 0.299 | 13.7 | -1.21 | 0.792 | -- | -- | -- | -0.46 | 21.7 | -- | -- | -- | -- |
| 68.54 | 0.386 | 13.7 | -1.37 | -- | -0.557 | -- | -- | -0.466 | -- | 29 | 3749 | -- | -- |
| 78.76 | 0.413 | 13.7 | -- | 0.778 | -0.129 | -- | -- | -0.315 | 21.5 | 29.41 | 4390 | -- | -- |
| 77.96 | 0.413 | 13.7 | -1.2 | -- | -- | -- | -- | -0.461 | -- | -- | -- | -- | -- |
| 79.4 | 0.417 | 13.7 | -- | 0.79 | -- | -- | -- | -0.325 | 21.6 | -- | -- | -- | -- |
| 113.89 | 0.497 | 13.7 | -- | -- | -0.26 | -- | -- | -0.302 | -- | 31.2 | 2194 | -- | -- |
| 116.19 | 0.503 | 13.7 | -- | -- | -- | -- | -- | -0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.95 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 5 | 32.27 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 6 | 32.28 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 7 | 32.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 8 | 32.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 11 | 32.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 12 | 32.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 15 | 32.66 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 35 | 32.95 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 38 | 32.98 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 39 | 32.98 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 40 | 32.99 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 47 | 32.99 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 49 | 33.00 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 59 | 33.13 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 73 | 33.13 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 84 | 33.19 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 89 | 33.20 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 99 | 33.24 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 100 | 33.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 112 | 33.27 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 119 | 33.31 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 128 | 33.33 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 192 | 33.47 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 197 | 33.48 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 201 | 33.50 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 207 | 33.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 225 | 33.57 | humidity | 80.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 272 | 33.67 | humidity | 80.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 343 | 33.78 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 345 | 33.78 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 372 | 33.83 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 376 | 33.84 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 385 | 33.85 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 436 | 33.88 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 504 | 33.94 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 583 | 34.00 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 637 | 34.04 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 644 | 34.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 11 |
| 671 | 34.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 14 |
| 689 | 34.08 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 825 | 34.18 | temperature | 30.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 876 | 34.22 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 890 | 34.23 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 908 | 34.25 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 937 | 34.26 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 962 | 34.29 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |