Os01g0107000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peroxisomal membrane anchor protein (Pex14p) domain containing protein.
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Os01g0107000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peroxisomal membrane anchor protein (Pex14p) domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.08 | 0.226 | 11.6 | 0.518 | 0.429 | -0.635 | 0.173 | 6.94 | -0.246 | 16.8 | 29.81 | 4132 | -- | -- |
| 25.17 | 0.234 | 11.8 | -0.59 | 0.417 | 0.236 | 0.137 | -- | -0.383 | 16.9 | 31.88 | 18608 | -- | -- |
| 23.15 | 0.224 | 11.6 | 0.519 | 0.43 | -0.635 | -- | 6.92 | -0.245 | 16.9 | 29.8 | 4129 | -- | -- |
| 25.2 | 0.234 | 11.8 | -0.6 | 0.416 | 0.238 | -- | -- | -0.383 | 16.9 | 31.73 | 18663 | -- | -- |
| 32.84 | 0.267 | 11.6 | 0.456 | -- | -0.638 | -- | 6.61 | -0.266 | -- | 30.02 | 4098 | -- | -- |
| 26.71 | 0.242 | 11.8 | -0.508 | 0.409 | -- | 0.0929 | -- | -0.281 | 16.9 | -- | -- | -- | -- |
| 26.72 | 0.242 | 11.8 | -0.508 | 0.41 | -- | -- | -- | -0.281 | 17 | -- | -- | -- | -- |
| 31.28 | 0.262 | 11.8 | -0.575 | -- | 0.491 | -- | -- | -0.291 | -- | 27.19 | 45006 | -- | -- |
| 29.5 | 0.253 | 11.8 | -- | 0.42 | -0.259 | -- | -- | -0.257 | 17 | 35.37 | 47520 | -- | -- |
| 35.55 | 0.279 | 11.8 | -0.523 | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
| 33.52 | 0.271 | 11.8 | -- | 0.419 | -- | -- | -- | -0.224 | 16.9 | -- | -- | -- | -- |
| 38.09 | 0.287 | 11.7 | -- | -- | -0.347 | -- | -- | -0.129 | -- | 7.285 | 47520 | -- | -- |
| 42.76 | 0.305 | 11.7 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 14 |
| 3 | 21.57 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 20 | 10 |
| 7 | 21.77 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 8 | 21.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 10 | 21.87 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 12 |
| 12 | 21.95 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 14 | 22.03 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 20 |
| 15 | 22.04 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 21 |
| 19 | 22.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 20 | 22.09 | radiation | 20.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 22 | 22.10 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 28 | 22.17 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 17 | 4 |
| 29 | 22.17 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 33 | 22.19 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 41 | 22.26 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 11 |
| 46 | 22.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 5 |
| 67 | 22.44 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 70 | 22.45 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 72 | 22.46 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 6 |
| 80 | 22.47 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 81 | 22.47 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 5 | 3 |
| 88 | 22.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 96 | 22.54 | radiation | 10.0 | 90 | < th | dose independent | sin | 11 | NA |
| 106 | 22.55 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 127 | 22.61 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 136 | 22.62 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 18 |
| 137 | 22.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 144 | 22.65 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 14 |
| 153 | 22.66 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 14 |
| 164 | 22.68 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 174 | 22.69 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 186 | 22.71 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 188 | 22.72 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 198 | 22.75 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 14 |
| 199 | 22.75 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 213 | 22.77 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 216 | 22.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 219 | 22.78 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 220 | 22.78 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 19 |
| 227 | 22.79 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 24 | 12 |
| 237 | 22.80 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 8 |
| 238 | 22.80 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 11 |
| 245 | 22.81 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 246 | 22.81 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 259 | 22.81 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 20 | 11 |
| 262 | 22.82 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 272 | 22.82 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 274 | 22.83 | temperature | 30.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 304 | 22.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 307 | 22.84 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 20 | 17 |
| 329 | 22.87 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 14 |
| 331 | 22.87 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 17 | 19 |
| 339 | 22.87 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 14 |
| 344 | 22.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 350 | 22.89 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 357 | 22.89 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 367 | 22.90 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 393 | 22.92 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 420 | 22.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 466 | 22.96 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 3 | 18 |
| 467 | 22.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 19 |
| 503 | 22.97 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 532 | 22.99 | temperature | 25.0 | 30 | < th | dose independent | sin | 7 | NA |
| 534 | 22.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 10 |
| 543 | 22.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 548 | 23.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 551 | 23.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 555 | 23.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 560 | 23.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 561 | 23.00 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 565 | 23.00 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 566 | 23.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 574 | 23.00 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 578 | 23.00 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 10 |
| 581 | 23.00 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 20 | 13 |
| 582 | 23.01 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 589 | 23.01 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 10 |
| 591 | 23.01 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 599 | 23.01 | radiation | 20.0 | 30 | < th | dose independent | rect. | 20 | 10 |
| 609 | 23.01 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 626 | 23.02 | temperature | 30.0 | 720 | < th | dose independent | sin | 1 | NA |
| 627 | 23.02 | radiation | 10.0 | 90 | > th | dose independent | sin | 10 | NA |
| 635 | 23.02 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 23 |
| 664 | 23.03 | atmosphere | 995.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 710 | 23.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 713 | 23.05 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 714 | 23.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 3 |
| 724 | 23.05 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 832 | 23.10 | atmosphere | 995.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 833 | 23.10 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 10 | NA |
| 843 | 23.10 | temperature | 25.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 845 | 23.10 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 22 | 10 |
| 915 | 23.12 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 20 | 23 |
| 942 | 23.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 10 |
| 949 | 23.13 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 972 | 23.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 10 |