Os01g0106900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment).
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Os01g0106900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.85 | 0.269 | 14.2 | -0.43 | 0.845 | -0.355 | -0.264 | 1.26 | -0.175 | 6.77 | 0.7097 | 1475 | -- | -- |
| 33.31 | 0.269 | 14.2 | -0.321 | 0.84 | -0.612 | -0.306 | -- | -0.195 | 6.85 | 0.2991 | 1437 | -- | -- |
| 33.01 | 0.268 | 14.2 | -0.441 | 0.843 | -0.342 | -- | 1.36 | -0.176 | 6.74 | 0.77 | 1483 | -- | -- |
| 33.23 | 0.268 | 14.2 | -0.368 | 0.913 | -0.664 | -- | -- | -0.166 | 7.42 | 0.2743 | 1353 | -- | -- |
| 50.09 | 0.33 | 14.2 | -0.0881 | -- | 1.11 | -- | -0.15 | -0.0691 | -- | 6.262 | 2250 | -- | -- |
| 37.4 | 0.287 | 14.2 | -0.16 | 0.852 | -- | -0.336 | -- | -0.0819 | 6.96 | -- | -- | -- | -- |
| 37.7 | 0.288 | 14.2 | -0.167 | 0.852 | -- | -- | -- | -0.0812 | 6.93 | -- | -- | -- | -- |
| 49.08 | 0.326 | 14.2 | -0.124 | -- | 1.13 | -- | -- | 0.0344 | -- | 6.189 | 2257 | -- | -- |
| 35.75 | 0.278 | 14.2 | -- | 0.893 | -0.494 | -- | -- | -0.117 | 7.27 | 0.3556 | 1353 | -- | -- |
| 75.77 | 0.407 | 14.2 | -0.149 | -- | -- | -- | -- | -0.0652 | -- | -- | -- | -- | -- |
| 38.43 | 0.29 | 14.2 | -- | 0.85 | -- | -- | -- | -0.0626 | 6.94 | -- | -- | -- | -- |
| 49.43 | 0.327 | 14.2 | -- | -- | 1.12 | -- | -- | 0.0512 | -- | 5.173 | 2260 | -- | -- |
| 76.36 | 0.408 | 14.2 | -- | -- | -- | -- | -- | -0.0487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 6 | 30.61 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 13 | 30.93 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 15 | 31.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 18 | 31.06 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 23 | 31.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 26 | 31.22 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 53 | 31.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 11 |
| 100 | 31.70 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 109 | 31.76 | temperature | 25.0 | 10 | > th | dose independent | rect. | 24 | 15 |
| 125 | 31.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 153 | 31.98 | temperature | 20.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 158 | 31.99 | temperature | 25.0 | 10 | < th | dose independent | rect. | 24 | 18 |
| 170 | 32.01 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 20 |
| 202 | 32.08 | temperature | 25.0 | 10 | > th | dose independent | rect. | 20 | 19 |
| 229 | 32.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 231 | 32.18 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 273 | 32.28 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 279 | 32.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 9 |
| 280 | 32.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 282 | 32.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 296 | 32.32 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 328 | 32.41 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 333 | 32.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 338 | 32.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 339 | 32.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 340 | 32.43 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 347 | 32.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 352 | 32.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 365 | 32.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 14 |
| 440 | 32.53 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 454 | 32.54 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 455 | 32.54 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 457 | 32.54 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 458 | 32.54 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 466 | 32.54 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 467 | 32.54 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 468 | 32.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 494 | 32.56 | wind | 9.0 | 90 | < th | dose independent | rect. | 19 | 6 |
| 496 | 32.56 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 510 | 32.58 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 513 | 32.59 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 6 |
| 519 | 32.60 | humidity | 90.0 | 10 | < th | dose independent | rect. | 23 | 16 |
| 526 | 32.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 527 | 32.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 20 |
| 543 | 32.63 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 15 |
| 571 | 32.66 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 573 | 32.66 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 576 | 32.66 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 579 | 32.67 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 587 | 32.68 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 2 |
| 596 | 32.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 598 | 32.69 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 611 | 32.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 622 | 32.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 624 | 32.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 637 | 32.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 15 |
| 640 | 32.72 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 651 | 32.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 15 |
| 660 | 32.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 6 |
| 666 | 32.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 6 |
| 674 | 32.74 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 677 | 32.75 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 12 |
| 689 | 32.76 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 690 | 32.76 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 696 | 32.77 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 19 |
| 705 | 32.78 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 13 |
| 725 | 32.80 | temperature | 30.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 731 | 32.81 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 733 | 32.81 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 734 | 32.81 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 18 |
| 743 | 32.81 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 796 | 32.85 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 18 |
| 797 | 32.85 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 19 |
| 805 | 32.86 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 808 | 32.86 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 21 |
| 818 | 32.87 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 844 | 32.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 866 | 32.90 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 19 |
| 890 | 32.92 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 11 |
| 916 | 32.92 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 21 |
| 957 | 32.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 17 |