Os01g0106800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to RING-box protein 1A (Regulator of cullins 1a) (dRbx1).
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Os01g0106800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to RING-box protein 1A (Regulator of cullins 1a) (dRbx1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7.92 | 0.132 | 13 | 0.326 | 0.549 | 0.493 | 0.191 | -0.493 | 0.0748 | 19.3 | 19.87 | 379 | -- | -- |
| 8.08 | 0.132 | 12.9 | 0.4 | 0.555 | 0.491 | 0.0857 | -- | 0.1 | 19.1 | 17.83 | 420 | -- | -- |
| 8.01 | 0.132 | 13 | 0.341 | 0.549 | 0.485 | -- | -0.403 | 0.0819 | 19.3 | 20.11 | 379 | -- | -- |
| 8.09 | 0.133 | 12.9 | 0.408 | 0.556 | 0.496 | -- | -- | 0.1 | 19.2 | 17.91 | 412 | -- | -- |
| 18.09 | 0.198 | 13 | 0.113 | -- | 0.955 | -- | -1.6 | 0.0158 | -- | 24.08 | 471 | -- | -- |
| 11.76 | 0.161 | 12.9 | 0.532 | 0.715 | -- | 0.183 | -- | 0.185 | 18.9 | -- | -- | -- | -- |
| 11.85 | 0.161 | 12.9 | 0.529 | 0.716 | -- | -- | -- | 0.185 | 18.9 | -- | -- | -- | -- |
| 19.11 | 0.204 | 12.9 | 0.369 | -- | 0.82 | -- | -- | 0.0819 | -- | 24.11 | 476 | -- | -- |
| 11.91 | 0.161 | 13 | -- | 0.516 | 0.746 | -- | -- | 0.0334 | 18.8 | 14.19 | 561 | -- | -- |
| 38.71 | 0.291 | 12.9 | 0.514 | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
| 19.23 | 0.205 | 12.9 | -- | 0.71 | -- | -- | -- | 0.126 | 18.9 | -- | -- | -- | -- |
| 22.26 | 0.22 | 13 | -- | -- | 0.898 | -- | -- | 0.0023 | -- | 22.55 | 488 | -- | -- |
| 45.67 | 0.315 | 12.9 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 3 | 7.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 4 | 7.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 23 | 7.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 27 | 7.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 31 | 8.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 43 | 8.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 45 | 8.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 47 | 8.05 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 57 | 8.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 61 | 8.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 74 | 8.09 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 133 | 8.18 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 193 | 8.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 197 | 8.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 206 | 8.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 210 | 8.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 218 | 8.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 237 | 8.27 | temperature | 20 | 270 | > th | dose dependent | sin | 23 | NA |
| 240 | 8.27 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 241 | 8.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 254 | 8.28 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 255 | 8.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 276 | 8.29 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 329 | 8.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 374 | 8.33 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 454 | 8.36 | temperature | 10 | 270 | > th | dose dependent | sin | 22 | NA |
| 458 | 8.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 468 | 8.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 478 | 8.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 514 | 8.38 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 563 | 8.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 669 | 8.43 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 701 | 8.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 718 | 8.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 726 | 8.44 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 791 | 8.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 19 |
| 809 | 8.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 811 | 8.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 945 | 8.49 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 14 |