Os01g0105300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, BED-type predicted domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0105300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Zinc finger, BED-type predicted domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.7 | 0.514 | 3.98 | -2.22 | 0.803 | -0.357 | -0.639 | -2.32 | -0.0374 | 7.09 | 1.51 | 4375 | -- | -- |
| 122.72 | 0.516 | 3.94 | -1.78 | 0.621 | -0.545 | -0.858 | -- | 0.0951 | 6.96 | 4.2 | 6759 | -- | -- |
| 120.66 | 0.512 | 3.98 | -2.23 | 0.801 | -0.371 | -- | -2.45 | -0.0314 | 7.21 | 1.52 | 4408 | -- | -- |
| 123.89 | 0.518 | 3.94 | -1.8 | 0.64 | -0.537 | -- | -- | 0.107 | 6.72 | 4.19 | 6781 | -- | -- |
| 133.46 | 0.538 | 3.94 | -1.83 | -- | -1.25 | -- | -1.49 | 0.16 | -- | 1.87 | 5199 | -- | -- |
| 128.35 | 0.531 | 3.95 | -1.75 | 0.786 | -- | -0.747 | -- | 0.00149 | 7.09 | -- | -- | -- | -- |
| 129.81 | 0.534 | 3.95 | -1.77 | 0.785 | -- | -- | -- | 0.0031 | 7.07 | -- | -- | -- | -- |
| 132.9 | 0.537 | 3.93 | -1.66 | -- | -1.2 | -- | -- | 0.194 | -- | 2.31 | 5179 | -- | -- |
| 199.83 | 0.658 | 3.89 | -- | 0.662 | -0.795 | -- | -- | 0.367 | 6.32 | 10.01 | 11071 | -- | -- |
| 162.24 | 0.595 | 3.97 | -1.75 | -- | -- | -- | -- | 0.0173 | -- | -- | -- | -- | -- |
| 212.12 | 0.681 | 3.91 | -- | 0.766 | -- | -- | -- | 0.2 | 7.21 | -- | -- | -- | -- |
| 200.31 | 0.659 | 3.88 | -- | -- | -1.49 | -- | -- | 0.422 | -- | 1.868 | 5231 | -- | -- |
| 243.19 | 0.728 | 3.93 | -- | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.76 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 4 | 115.12 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 7 | 1 |
| 7 | 115.99 | humidity | 90 | 30 | < th | dose independent | rect. | 7 | 1 |
| 9 | 116.24 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 14 |
| 10 | 116.25 | radiation | 10 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 23 | 116.48 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 24 | 116.56 | humidity | 90 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 26 | 116.61 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 28 | 116.74 | humidity | 90 | 90 | < th | dose dependent | rect. | 4 | 4 |
| 33 | 116.91 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 37 | 117.11 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 38 | 117.17 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 44 | 117.32 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 59 | 117.79 | radiation | 1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 64 | 117.97 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 68 | 118.12 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 72 | 118.17 | radiation | 1 | 270 | > th | dose independent | rect. | 4 | 1 |
| 93 | 118.22 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 94 | 118.23 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 95 | 118.24 | temperature | 25 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 101 | 118.26 | temperature | 25 | 14400 | < th | dose dependent | sin | 3 | NA |
| 110 | 118.27 | radiation | 10 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 153 | 118.33 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 21 |
| 171 | 118.34 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 179 | 118.35 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 190 | 118.35 | temperature | 25 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 203 | 118.35 | temperature | 25 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 214 | 118.36 | wind | 3 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 217 | 118.36 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 17 |
| 252 | 118.37 | temperature | 25 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 328 | 118.43 | temperature | 30 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 347 | 118.44 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 14 |
| 349 | 118.44 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 428 | 118.49 | temperature | 25 | 14400 | < th | dose dependent | sin | 15 | NA |
| 459 | 118.50 | temperature | 25 | 14400 | < th | dose dependent | rect. | 15 | 13 |
| 481 | 118.51 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 510 | 118.52 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 16 |
| 520 | 118.52 | temperature | 10 | 14400 | > th | dose dependent | rect. | 2 | 10 |
| 601 | 118.54 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 618 | 118.54 | temperature | 15 | 14400 | > th | dose dependent | rect. | 21 | 16 |
| 636 | 118.55 | temperature | 20 | 14400 | > th | dose independent | sin | 8 | NA |
| 638 | 118.55 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 640 | 118.55 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 755 | 118.57 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 13 |
| 769 | 118.57 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 771 | 118.57 | temperature | 10 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 777 | 118.57 | temperature | 25 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 797 | 118.58 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 803 | 118.58 | radiation | 10 | 10 | > th | dose independent | rect. | 17 | 15 |
| 812 | 118.58 | temperature | 15 | 14400 | > th | dose dependent | sin | 5 | NA |
| 865 | 118.59 | temperature | 10 | 14400 | > th | dose dependent | rect. | 9 | 3 |
| 953 | 118.61 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 962 | 118.61 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 993 | 118.62 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |