BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0105300 Os01g0105300|AK072732
         (711 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1  | chr3:14321838-14323928 FORWARD LENGTH=697          157   2e-38
AT1G18560.1  | chr1:6385614-6388005 FORWARD LENGTH=691             89   6e-18

>AT3G42170.1 | chr3:14321838-14323928 FORWARD LENGTH=697
          Length = 696

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/662 (22%), Positives = 258/662 (38%), Gaps = 75/662 (11%)

Query: 55  SASTNTGSKRSRTSGVWQHFDEVAMTGPDGRQVTFARCRICKNKLSAKSSG----GTGHL 110
           S  T    +R + S VW+HF  +    P+ R+   A C+ C N+  A S+G    GT HL
Sbjct: 55  SPETQPIKRRKKKSMVWEHFT-IEAVEPNCRR---AFCKGC-NQSFAYSNGNKVAGTSHL 109

Query: 111 KRHAEACAKKQGIXXXXXXXXXNPDGTVRTWEYDPMV----------------------- 147
           KRH       +G          N +  + +  Y P                         
Sbjct: 110 KRHI-----FKGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDK 164

Query: 148 ARENLARLIARQDLPLNFGESPAFENYIKNSHNPRFQAVSRQTTTRDLKNVYDKGYESLK 207
            R+ +A++I   D PL+  + P F ++++ S  P F AVS      D    Y    +++ 
Sbjct: 165 CRQEIAKMIIMHDYPLHMVQHPGFVSFVQ-SIQPHFDAVSFNNVQGDCVATYLAEKQNVM 223

Query: 208 ELXXXXXXXXXXXXDIWSSRAKEDYLSVVVHFIDDDWQMQKRVLGLRLIDVSHTGENIAE 267
           +             D W+S+    Y+ +  H+ID DW++QK++L + +       E ++ 
Sbjct: 224 KSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSL 283

Query: 268 RIREVIDEFNLADKIFAVTMDNASANSRAMEILQPLFCIYAQSFLLHQ----RCACHIIN 323
            +   + E+ L  K+F VT ++ ++NS A+E ++P  CI     L  Q     C      
Sbjct: 284 AVANCVSEWGLEGKLFNVTFNHPASNS-AVENIRPQLCIKNPGILDGQLVIGNCVARTFG 342

Query: 324 LIVKCGFKRVNVHIDAVRQAITWLTASNPRIAQWKRYCCASGEPPRKFLT-DADHRWNAT 382
            + K   ++    I  +R ++  +  S     ++         P  K L+ D   +WN T
Sbjct: 343 SLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTT 402

Query: 383 YFMLKVVLPYKDLLTVFLQTRNGPKNSDGQPILTDHTWHIVERFNQFLETFHDCTLLLSQ 442
           Y ML      K++ +          + D +   +   W  VE    FL+   +    L  
Sbjct: 403 YMMLVAASELKEVFSCL-----DTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQS 457

Query: 443 VYYPTANLILHNILEIATLLKE--YENDDLLMPVVFNMKQKYLKYWKDIPMLYSFAFILD 500
              P+A    H + +  + L       D  +  +   M++K  KYW+D  ++ + A ++D
Sbjct: 458 TGNPSAVTFFHEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMD 517

Query: 501 PRGKLRGFLNILSLIGDIINVDYSTYYADVKTKFYEVFRKYELKFQGDRLQRPPPVPAAG 560
           PR K++  L   S    I   D       V    +E+F +Y        L  P    + G
Sbjct: 518 PRFKMK--LVEFSF-SKIFGEDAGKNIKTVDDGIHELFTEYM------ALPSPQNTTSEG 568

Query: 561 KKKLQWSRIWXXXXXXXXXXXXXXXXXXXXXXXXPAEELSNYLDSDAIRHETSDFNVLGW 620
            K    S                              EL  YLD + +     +F+VL W
Sbjct: 569 GKADGLSDF--------------DTYIMETTGQNLKSELDQYLD-ETLLPRVQEFDVLDW 613

Query: 621 WNDHKMSYPVLSKLARDXXXXXXXXXXXXXXXXLCGRIIEDRRTSLSSDHVEILLSVKDW 680
           W  +K+ YP LSK+ARD                +  R +++ +TSL  + VE L+  ++W
Sbjct: 614 WKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREW 673

Query: 681 EL 682
            L
Sbjct: 674 LL 675



>AT1G18560.1 | chr1:6385614-6388005 FORWARD LENGTH=691
          Length = 690

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 136/654 (20%), Positives = 230/654 (35%), Gaps = 47/654 (7%)

Query: 50  GTMSGSASTNTGSKRSRTSGVWQHFDEVAMTGPDGRQVTFARCRICKNKLS-AKSSGGTG 108
           G+   S S     K++ TS   ++F+    T PD +     +C+ C    S A ++G  G
Sbjct: 37  GSSDKSNSVPPKRKKTMTSVYLKYFE----TAPDSKT---RKCKFCGQSYSIATATGNLG 89

Query: 109 -HLKRHAEACAKKQGIXXXXXXXXXNPDGTVRTWEYD---PMVARENLARLIARQDLPLN 164
            HL        K              P   V+  +     P +  ++L  L+ +     +
Sbjct: 90  RHLTNRHPGYDKAAADVVTSSSVPQTPPAVVKPSQSQSKVPQLDYDHLNWLVLKWLALSS 149

Query: 165 FGESPAFENYIKNSHN---PRFQAVSRQTTTRDLKNVYDKGYESLKELXXXXXXXXXXXX 221
              S   E ++ NS     P  Q    +     L  V+      +K              
Sbjct: 150 LPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVTL 209

Query: 222 DIWSSRAKEDYLSVVVHFIDDDWQMQKRVLGLRLIDVSHTGENIAERIREVIDEFNLADK 281
             W+S     Y+SV   +ID++W   + +L +  I     G  I   + +V+  + + D+
Sbjct: 210 SFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIEDR 269

Query: 282 IFAVTMDNASANSRAMEILQPLFCIYAQSFLLHQRCACHIINLIVKCGFKRVNVHIDAVR 341
           I   T DN+     A   L+  F         +  CA   +N I+  G   +   I  VR
Sbjct: 270 ILCCTHDNSENAIHACHSLKEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKPIISKVR 329

Query: 342 QAITWLTASNPRIAQWKRYCCASGEPPRKFLTDADHRWNATYFMLKVVL-PYKDLLTVFL 400
           +    L AS      + +   A  E   K   DA  RW+  Y M+ ++    K L +V  
Sbjct: 330 EFTQELNASTELSDDFIQLTTAYQEGNWKLPIDASSRWSGNYQMVNILCKASKSLDSVIR 389

Query: 401 QTRNGPKNSDGQPILTDHTWHIVERFNQFLETFHDCTLLLS---QVYYPTANLILHNILE 457
           +  +  +N      +  +   IV  +   L++FH  T  +     +    A L + NI E
Sbjct: 390 KNEDALENRMMLSSVEKNAVTIVHNYLD-LDSFHKTTNDMCTNKDLTVGLALLFMDNISE 448

Query: 458 -IATLLKEYENDDLLMPVVFNMKQKYLKYWKDIPMLYSF-AFILDPRGKLRGFLNILSLI 515
            I T  K   N D L     +M QK   Y   +  ++++   ILDPR K          I
Sbjct: 449 MITTCQKSCHNPDWLRTCAESMAQKARSYNTQVCNVFTYITAILDPRIKTE-------YI 501

Query: 516 GDIINVDYSTYYADVKTKFYEVFRKYELKFQGDRLQRPPPVPAAGKKKLQWSRIWXXXXX 575
            + IN++  +Y  + ++ F   +             RP  V   G               
Sbjct: 502 PETINLE--SYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDEGGGN------------- 546

Query: 576 XXXXXXXXXXXXXXXXXXXPAEELSNYLDSDAIRHETSDFNVLGWWNDHKMSYPVLSKLA 635
                                +EL+ YL    +  +T   +VL WW  +   YP LS +A
Sbjct: 547 ISFAEEIARRKRRGSMSNNVVDELTQYLSESIVPMQT---DVLDWWKVNSGRYPRLSNMA 603

Query: 636 RDXXXXXXXXXXXXXXXXLCGRIIEDRRTSLSSDHVEILLSVKDWELAAEHAQY 689
           RD                  G  I+ ++  +  D  + ++ ++ W  A    +Y
Sbjct: 604 RDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPHDSTQSVICIRSWIEAGMKLKY 657



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,906,016
Number of extensions: 600054
Number of successful extensions: 1662
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1657
Number of HSP's successfully gapped: 3
Length of query: 711
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 605
Effective length of database: 8,200,473
Effective search space: 4961286165
Effective search space used: 4961286165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)