Os01g0103700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0103700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.88 | 0.396 | 9.36 | 0.187 | 0.175 | 1.54 | -0.835 | 0.192 | -0.102 | 19.9 | 31.44 | 277 | -- | -- |
| 70.93 | 0.392 | 9.36 | 0.201 | 0.171 | 1.56 | -0.853 | -- | -0.103 | 19.8 | 31.67 | 275 | -- | -- |
| 72.41 | 0.396 | 9.37 | 0.159 | 0.21 | 1.53 | -- | 0.468 | -0.131 | 21.7 | 31.82 | 317 | -- | -- |
| 72.63 | 0.397 | 9.36 | 0.236 | 0.219 | 1.53 | -- | -- | -0.115 | 21.7 | 32.1 | 316 | -- | -- |
| 74.4 | 0.402 | 9.36 | 0.189 | -- | 1.6 | -- | 0.0812 | -0.145 | -- | 36.81 | 130 | -- | -- |
| 99.5 | 0.468 | 9.4 | -0.118 | 0.431 | -- | 0.637 | -- | -0.363 | 3.77 | -- | -- | -- | -- |
| 100.42 | 0.469 | 9.41 | -0.128 | 0.433 | -- | -- | -- | -0.366 | 3.15 | -- | -- | -- | -- |
| 74.41 | 0.402 | 9.36 | 0.201 | -- | 1.6 | -- | -- | -0.146 | -- | 63.2 | 130 | -- | -- |
| 73.89 | 0.4 | 9.37 | -- | 0.226 | 1.49 | -- | -- | -0.149 | 22.2 | 32.57 | 334 | -- | -- |
| 111.11 | 0.493 | 9.41 | -0.11 | -- | -- | -- | -- | -0.355 | -- | -- | -- | -- | -- |
| 100.86 | 0.47 | 9.4 | -- | 0.431 | -- | -- | -- | -0.352 | 3.15 | -- | -- | -- | -- |
| 75.4 | 0.404 | 9.37 | -- | -- | 1.53 | -- | -- | -0.175 | -- | 75.07 | 125 | -- | -- |
| 111.43 | 0.493 | 9.4 | -- | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 7 | 69.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 12 | 69.97 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 20 | 70.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 27 | 70.80 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 28 | 70.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 29 | 70.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 30 | 70.89 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 36 | 71.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 43 | 71.25 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 44 | 71.27 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 53 | 71.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 74 | 71.63 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 98 | 71.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 100 | 71.93 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 103 | 71.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 108 | 71.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 110 | 72.02 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 113 | 72.02 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 141 | 72.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 162 | 72.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 163 | 72.36 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 164 | 72.36 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 174 | 72.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 182 | 72.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 186 | 72.54 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 189 | 72.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 206 | 72.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 208 | 72.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 242 | 72.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 264 | 72.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 282 | 72.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 303 | 72.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 361 | 73.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 367 | 73.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 380 | 73.25 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 449 | 73.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 460 | 73.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 497 | 73.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 510 | 73.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 524 | 73.75 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 537 | 73.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 579 | 73.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 599 | 73.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 607 | 74.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 610 | 74.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 620 | 74.03 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 785 | 74.33 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 823 | 74.39 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 863 | 74.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 898 | 74.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 945 | 74.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 969 | 74.63 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 10 |