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Os01g0102300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0254) R2 : 0.632
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.64 (0.0606) R2dC : 0.596 R2C : 0.58
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.377 (0.0534) R2dN8 : 0.0521 R2N8 : 0.036
σ : 0.479
deviance : 104.66
__
_____
C
peak time of C : 23.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.25 0.397 12 0.605 1.64 -0.9 -1.85 1.5 -0.385 23.5 93.89 181 -- --
72.87 0.398 12 0.613 1.64 -0.895 -1.81 -- -0.379 23.5 94 180 -- --
83.72 0.426 12 0.51 1.61 -0.669 -- 2.1 -0.411 23.4 93.69 469 -- --
87.05 0.435 12 0.687 1.65 -0.808 -- -- -0.362 23.6 93.67 184 -- --
179.35 0.624 12 0.576 -- -1.77 -- 2.52 -0.529 -- 68.53 920 -- --
79.11 0.417 12 0.57 1.63 -- -1.85 -- -0.312 23.1 -- -- -- --
93.69 0.453 11.9 0.645 1.64 -- -- -- -0.306 23.2 -- -- -- --
182.94 0.63 11.9 0.688 -- -1.81 -- -- -0.487 -- 71.65 899 -- --
99.33 0.464 12 -- 1.65 -0.847 -- -- -0.442 23.6 94 184 -- --
261.18 0.755 11.9 0.684 -- -- -- -- -0.292 -- -- -- -- --
104.66 0.479 12 -- 1.64 -- -- -- -0.377 23.2 -- -- -- --
195.36 0.651 12 -- -- -1.77 -- -- -0.514 -- 66.76 904 -- --
273.52 0.772 11.9 -- -- -- -- -- -0.368 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.86 humidity 90.0 720 < th dose independent rect. 23 1
2 68.99 temperature 20.0 90 > th dose independent rect. 11 12
3 69.04 radiation 20.0 14400 < th dose dependent rect. 23 1
5 69.15 wind 9.0 30 < th dose independent rect. 23 23
8 69.50 temperature 25.0 10 > th dose independent rect. 22 1
9 69.52 humidity 60.0 90 > th dose independent rect. 23 12
10 69.58 radiation 40.0 720 < th dose independent rect. 23 10
12 69.64 temperature 20.0 30 > th dose dependent rect. 22 1
14 69.70 wind 9.0 1440 < th dose independent rect. 23 1
15 69.70 temperature 10.0 1440 > th dose independent rect. 23 1
18 69.70 temperature 30.0 1440 < th dose independent rect. 23 1
22 69.70 humidity 50.0 1440 > th dose independent rect. 23 1
32 69.70 atmosphere 995.0 1440 > th dose independent rect. 23 1
33 69.70 radiation 1.0 1440 < th dose independent rect. 23 1
53 69.70 wind 1.0 90 > th dose independent rect. 23 12
54 69.70 temperature 10.0 1440 > th dose independent rect. 24 23
58 69.70 radiation 1.0 1440 < th dose dependent rect. 23 1
63 69.71 wind 3.0 30 < th dose independent rect. 22 1
64 69.71 humidity 80.0 30 > th dose independent rect. 22 1
65 69.71 atmosphere 1005.0 30 > th dose independent rect. 22 1
68 69.74 humidity 70.0 30 > th dose dependent rect. 22 1
70 69.75 atmosphere 1005.0 30 > th dose dependent rect. 22 1
71 69.76 wind 5.0 30 < th dose dependent rect. 22 1
72 69.76 humidity 50.0 30 > th dose dependent rect. 22 1
74 69.76 atmosphere 995.0 30 > th dose dependent rect. 22 1
78 69.77 precipitation 0.1 30 < th dose independent rect. 22 1
82 69.77 precipitation 0.1 30 < th dose dependent rect. 22 1
85 69.78 temperature 10.0 30 > th dose independent rect. 22 1
87 69.78 temperature 30.0 30 < th dose independent rect. 22 1
88 69.78 humidity 50.0 30 > th dose independent rect. 22 1
92 69.78 atmosphere 1010.0 30 < th dose independent rect. 22 1
94 69.78 radiation 1.0 30 < th dose independent rect. 22 1
100 69.78 temperature 10.0 30 > th dose independent rect. 23 23
102 69.78 radiation 1.0 30 < th dose dependent rect. 22 1
107 69.80 wind 1.0 30 > th dose independent rect. 22 1
108 69.80 precipitation 0.1 720 < th dose independent rect. 23 10
109 69.80 precipitation 0.1 720 < th dose dependent rect. 23 10
110 69.81 humidity 90.0 30 < th dose independent rect. 22 1
113 69.85 radiation 10.0 720 < th dose independent rect. 17 6
115 69.87 atmosphere 1015.0 30 < th dose dependent rect. 22 1
117 69.88 wind 1.0 30 > th dose dependent rect. 22 1
121 69.92 humidity 90.0 30 < th dose dependent rect. 22 1
125 69.96 precipitation 0.1 30 < th dose independent rect. 23 23
127 69.96 precipitation 0.1 30 < th dose dependent rect. 23 23
132 70.02 temperature 30.0 30 < th dose dependent rect. 22 1
135 70.10 wind 1.0 30 > th dose independent rect. 23 23
172 70.22 humidity 90.0 90 < th dose independent rect. 23 12
176 70.25 precipitation 0.1 720 < th dose independent rect. 21 14
177 70.25 precipitation 0.1 720 < th dose dependent rect. 21 14
179 70.30 wind 1.0 720 > th dose independent rect. 23 1
181 70.34 temperature 20.0 720 > th dose independent rect. 11 1
183 70.40 humidity 90.0 90 < th dose independent rect. 23 10
186 70.52 humidity 90.0 720 < th dose independent rect. 11 1
193 70.69 temperature 20.0 30 > th dose independent rect. 11 20
195 70.73 radiation 40.0 90 < th dose independent rect. 23 12
196 70.73 temperature 10.0 90 > th dose dependent rect. 11 12
199 70.85 temperature 20.0 90 > th dose independent rect. 9 22
202 70.91 wind 7.0 720 < th dose independent rect. 23 10
206 71.02 humidity 50.0 10 > th dose independent rect. 23 23
210 71.12 temperature 10.0 720 > th dose dependent rect. 11 1
212 71.16 temperature 20.0 10 > th dose independent rect. 22 17
218 71.28 atmosphere 1010.0 720 < th dose independent rect. 11 1
221 71.33 wind 9.0 720 < th dose independent rect. 21 14
223 71.35 humidity 60.0 720 > th dose independent rect. 5 6
224 71.39 atmosphere 995.0 30 > th dose independent rect. 23 23
228 71.49 temperature 10.0 720 > th dose independent rect. 11 10
229 71.49 temperature 10.0 720 > th dose independent rect. 21 14
230 71.49 atmosphere 995.0 720 > th dose independent rect. 21 14
234 71.52 precipitation 0.1 90 < th dose independent rect. 23 12
235 71.52 precipitation 0.1 90 < th dose dependent rect. 23 12
239 71.56 temperature 10.0 720 > th dose independent rect. 23 10
240 71.56 humidity 50.0 720 > th dose independent rect. 23 10
241 71.56 atmosphere 995.0 720 > th dose independent rect. 23 10
242 71.56 humidity 90.0 30 < th dose independent rect. 11 12
243 71.56 temperature 10.0 720 > th dose independent rect. 9 14
247 71.63 temperature 20.0 270 > th dose independent rect. 9 14
250 71.67 temperature 20.0 10 > th dose independent rect. 22 9
255 71.70 temperature 20.0 10 > th dose independent rect. 11 23
260 71.74 atmosphere 1015.0 720 < th dose independent rect. 11 10
264 71.79 temperature 30.0 720 < th dose independent rect. 23 10
265 71.81 temperature 30.0 90 < th dose independent rect. 23 12
266 71.81 atmosphere 1015.0 90 < th dose independent rect. 11 12
275 71.89 temperature 10.0 90 > th dose independent rect. 23 12
276 71.89 atmosphere 995.0 90 > th dose independent rect. 23 12
277 71.94 radiation 1.0 4320 > th dose independent rect. 9 1
278 71.94 wind 9.0 90 < th dose independent rect. 23 12
287 71.99 humidity 90.0 30 < th dose dependent rect. 23 10
290 72.05 temperature 20.0 720 > th dose independent rect. 11 10
296 72.10 wind 9.0 90 < th dose independent rect. 11 12
300 72.14 radiation 10.0 720 > th dose independent rect. 11 1
305 72.16 temperature 20.0 10 > th dose independent rect. 22 21
311 72.22 radiation 20.0 720 < th dose dependent rect. 17 6
315 72.27 precipitation 0.1 90 < th dose independent rect. 11 12
316 72.27 precipitation 0.1 90 < th dose dependent rect. 11 12
321 72.31 atmosphere 1005.0 10 > th dose dependent rect. 24 11
323 72.32 temperature 20.0 90 < th dose independent rect. 8 20
325 72.33 temperature 20.0 10 > th dose independent rect. 20 23
332 72.38 humidity 50.0 720 > th dose independent rect. 21 14
340 72.42 humidity 80.0 30 < th dose independent rect. 19 16
343 72.44 atmosphere 995.0 90 > th dose independent rect. 11 12
344 72.45 temperature 25.0 90 > th dose independent rect. 24 11
349 72.48 wind 1.0 90 > th dose independent rect. 11 12
356 72.54 humidity 70.0 10 > th dose dependent rect. 20 12
365 72.58 temperature 20.0 10 < th dose independent rect. 7 22
369 72.61 radiation 1.0 1440 > th dose independent rect. 9 3
375 72.67 wind 1.0 90 > th dose independent rect. 23 10
377 72.67 humidity 70.0 30 > th dose dependent rect. 18 14
378 72.68 humidity 50.0 720 > th dose independent rect. 11 1
383 72.69 radiation 40.0 30 < th dose independent rect. 23 23
388 72.73 temperature 25.0 10 > th dose independent rect. 7 4
397 72.76 temperature 20.0 10 > th dose independent rect. 20 19
406 72.79 humidity 90.0 720 > th dose dependent rect. 20 6
418 72.83 atmosphere 1005.0 720 > th dose dependent rect. 23 2
420 72.84 precipitation 0.1 1440 < th dose independent rect. 23 1
423 72.84 precipitation 0.1 1440 < th dose dependent rect. 23 1
430 72.85 humidity 80.0 30 > th dose dependent rect. 22 12
439 72.88 humidity 70.0 10 > th dose dependent rect. 22 10
443 72.90 humidity 50.0 270 > th dose dependent rect. 18 12
444 72.91 wind 1.0 720 > th dose independent rect. 17 6
466 72.97 temperature 10.0 1440 > th dose independent rect. 12 12
469 72.97 temperature 10.0 1440 > th dose independent rect. 24 12
472 72.97 atmosphere 995.0 1440 > th dose independent rect. 24 12
477 72.98 atmosphere 995.0 720 > th dose independent rect. 17 6
485 73.01 wind 9.0 720 < th dose independent rect. 11 1
487 73.01 atmosphere 995.0 720 > th dose independent rect. 11 1
489 73.01 precipitation 0.1 720 < th dose independent rect. 11 1
492 73.01 temperature 10.0 720 > th dose independent rect. 12 23
493 73.01 precipitation 0.1 720 < th dose dependent rect. 11 1
502 73.05 temperature 20.0 10 < th dose independent rect. 16 21
527 73.07 humidity 90.0 720 > th dose dependent rect. 23 2
529 73.08 humidity 50.0 720 > th dose independent rect. 17 6
536 73.10 temperature 15.0 30 > th dose dependent rect. 11 20
584 73.17 wind 1.0 720 > th dose independent rect. 11 1
596 73.19 humidity 70.0 10 > th dose dependent rect. 20 14
598 73.21 temperature 25.0 270 > th dose independent rect. 7 1
604 73.22 humidity 90.0 270 < th dose independent rect. 6 2
608 73.22 atmosphere 1015.0 720 < th dose independent rect. 1 22
631 73.27 wind 1.0 720 > th dose independent rect. 6 19
650 73.30 radiation 1.0 1440 < th dose independent rect. 11 1
651 73.30 temperature 10.0 720 > th dose independent rect. 5 6
652 73.30 humidity 90.0 90 < th dose independent rect. 5 6
653 73.30 atmosphere 995.0 720 > th dose independent rect. 5 6
654 73.30 atmosphere 1015.0 720 < th dose independent rect. 5 6
655 73.30 temperature 10.0 720 > th dose independent rect. 11 18
657 73.30 radiation 1.0 1440 < th dose dependent rect. 11 1
664 73.31 precipitation 0.1 720 < th dose independent rect. 23 18
668 73.31 radiation 1.0 720 > th dose dependent rect. 11 1
671 73.31 precipitation 0.1 720 < th dose dependent rect. 23 18
684 73.34 temperature 10.0 720 > th dose independent rect. 17 6
688 73.34 temperature 10.0 720 > th dose independent rect. 23 18
704 73.37 temperature 20.0 90 > th dose independent rect. 17 22
710 73.38 temperature 20.0 10 > th dose independent rect. 18 21
722 73.40 atmosphere 1015.0 90 < th dose independent rect. 23 12
730 73.42 temperature 10.0 43200 > th dose independent rect. 9 3
746 73.44 humidity 90.0 30 < th dose dependent rect. 23 12
759 73.46 temperature 20.0 10 > th dose independent rect. 3 23
765 73.47 atmosphere 995.0 720 > th dose dependent rect. 23 1
766 73.48 atmosphere 1015.0 720 < th dose independent rect. 3 9
775 73.50 wind 9.0 720 < th dose independent rect. 5 6
786 73.51 temperature 10.0 43200 > th dose independent rect. 9 1
801 73.54 precipitation 0.1 270 > th dose independent rect. 2 2
805 73.54 atmosphere 995.0 90 > th dose dependent rect. 11 12
807 73.54 humidity 70.0 10 > th dose dependent rect. 18 16
810 73.55 temperature 20.0 10 < th dose independent rect. 1 23
811 73.55 temperature 20.0 10 < th dose independent rect. 23 23
812 73.55 temperature 25.0 10 > th dose dependent rect. 7 4
829 73.58 temperature 20.0 90 > th dose independent rect. 3 23
830 73.59 temperature 20.0 10 < th dose independent no NA NA
835 73.59 humidity 90.0 1440 > th dose dependent rect. 20 1
837 73.59 temperature 15.0 10 > th dose dependent rect. 22 9
839 73.59 temperature 25.0 10 > th dose dependent rect. 24 11
850 73.61 temperature 20.0 10 < th dose independent rect. 3 23
851 73.61 temperature 20.0 10 < th dose independent rect. 11 23
854 73.62 radiation 30.0 10 < th dose independent rect. 8 3
857 73.62 temperature 20.0 10 < th dose independent rect. 21 23
858 73.62 atmosphere 1005.0 90 < th dose dependent rect. 24 9
867 73.63 temperature 20.0 10 < th dose independent rect. 19 23
868 73.63 precipitation 0.1 270 > th dose dependent rect. 2 2
872 73.64 temperature 25.0 30 > th dose independent rect. 18 5
875 73.64 humidity 90.0 30 > th dose dependent sin 6 NA
886 73.66 temperature 25.0 10 < th dose dependent sin 17 NA
893 73.67 wind 9.0 720 < th dose independent rect. 11 10
898 73.67 atmosphere 1005.0 270 < th dose dependent rect. 1 1
930 73.70 temperature 20.0 10 > th dose independent rect. 1 23
934 73.70 wind 1.0 270 < th dose dependent rect. 24 1
935 73.70 atmosphere 1005.0 10 < th dose dependent rect. 1 7
940 73.71 temperature 20.0 90 > th dose independent rect. 3 20
952 73.71 radiation 1.0 270 < th dose dependent rect. 18 14
957 73.72 humidity 80.0 10 > th dose independent rect. 20 12
958 73.72 humidity 60.0 720 > th dose independent rect. 23 12
979 73.73 temperature 10.0 30 > th dose dependent rect. 23 12
983 73.74 temperature 25.0 270 < th dose independent rect. 14 9