BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0438000 Os10g0438000|Os10g0438000
         (298 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0438000  BTB domain containing protein                       518   e-147
Os03g0157500  Similar to FH protein interacting protein FIP2      347   8e-96

>Os10g0438000 BTB domain containing protein
          Length = 298

 Score =  518 bits (1335), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/282 (91%), Positives = 257/282 (91%)

Query: 1   MQPPILLNIGGSRYETTADTLTQRDPXXXXXXXXXXXXXHGLPTTEDGAVFVDRDGELFR 60
           MQPPILLNIGGSRYETTADTLTQRDP             HGLPTTEDGAVFVDRDGELFR
Sbjct: 1   MQPPILLNIGGSRYETTADTLTQRDPGSLLAAALSGAAAHGLPTTEDGAVFVDRDGELFR 60

Query: 61  HVLNWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERIEDWDDKIGRSSEAELTRK 120
           HVLNWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERIEDWDDKIGRSSEAELTRK
Sbjct: 61  HVLNWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERIEDWDDKIGRSSEAELTRK 120

Query: 121 DVIKCIQADKVRFRGVNXXXXXXXXXXXXEVDFSCGCIEETKFSLANLYKAKFREVQASR 180
           DVIKCIQADKVRFRGVN            EVDFSCGCIEETKFSLANLYKAKFREVQASR
Sbjct: 121 DVIKCIQADKVRFRGVNLSGLDLSKLDLSEVDFSCGCIEETKFSLANLYKAKFREVQASR 180

Query: 181 SSFNYANLRECEFVGANLQESTLDRANLQSANLQDACLVKCSFIETDLRSAHLQRADLTG 240
           SSFNYANLRECEFVGANLQESTLDRANLQSANLQDACLVKCSFIETDLRSAHLQRADLTG
Sbjct: 181 SSFNYANLRECEFVGANLQESTLDRANLQSANLQDACLVKCSFIETDLRSAHLQRADLTG 240

Query: 241 ANLTGANLEGANLKGAKLSGSNLQGANLQRAYLREVDLRETQ 282
           ANLTGANLEGANLKGAKLSGSNLQGANLQRAYLREVDLRETQ
Sbjct: 241 ANLTGANLEGANLKGAKLSGSNLQGANLQRAYLREVDLRETQ 282



>Os03g0157500 Similar to FH protein interacting protein FIP2
          Length = 303

 Score =  347 bits (889), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 182/279 (65%), Positives = 210/279 (75%), Gaps = 5/279 (1%)

Query: 5   ILLNIGGSRYETTADTLTQRDPXXXXXXXXXXXXXHGLPTTED-GAVFVDRDGELFRHVL 63
           +LLNIGG RY TT +TLTQR+P             H LP   D G VFVDRDG+ FRHVL
Sbjct: 13  VLLNIGGKRYATTVETLTQREPSSMLAAMFSGR--HTLPRHPDTGMVFVDRDGKHFRHVL 70

Query: 64  NWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERIEDWDDKIGRSSEAELTRKDVI 123
           NWLRDGAVP ++++EY+QLLREAEYY+L GL DCI++R+   +D+    SEAELTRKDVI
Sbjct: 71  NWLRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDE--NFSEAELTRKDVI 128

Query: 124 KCIQADKVRFRGVNXXXXXXXXXXXXEVDFSCGCIEETKFSLANLYKAKFREVQASRSSF 183
           KCIQA +VRFRGVN            EVDFS  CI+   FS A L KAKFR  +A+ SSF
Sbjct: 129 KCIQAPRVRFRGVNLSGLDLSKLDLSEVDFSYACIKNANFSSAYLRKAKFRLTEATCSSF 188

Query: 184 NYANLRECEFVGANLQESTLDRANLQSANLQDACLVKCSFIETDLRSAHLQRADLTGANL 243
             ANL ECE +GANL+ S LD+ANLQSANLQDACL +C FIETDLRSAHLQ A+L GANL
Sbjct: 189 QSANLHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAHLQGANLMGANL 248

Query: 244 TGANLEGANLKGAKLSGSNLQGANLQRAYLREVDLRETQ 282
           +GANLEGANLKGAKL+G+NL+ ANLQRAYLREVDLRET 
Sbjct: 249 SGANLEGANLKGAKLAGTNLECANLQRAYLREVDLRETH 287



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,944,807
Number of extensions: 281438
Number of successful extensions: 698
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 670
Number of HSP's successfully gapped: 2
Length of query: 298
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 198
Effective length of database: 11,814,401
Effective search space: 2339251398
Effective search space used: 2339251398
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)