BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0381400 Os04g0381400|Os04g0381400
         (346 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0381400  Esterase/lipase/thioesterase domain containing...   584   e-167

>Os04g0381400 Esterase/lipase/thioesterase domain containing protein
          Length = 346

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/302 (94%), Positives = 286/302 (94%)

Query: 45  CAYALREGQSQRFHRLPCGLDLEVIAQQXXXXXXXXXXXXXXXXLVFVHGSFHAAWCWAE 104
           CAYALREGQSQRFHRLPCGLDLEVIAQQ                LVFVHGSFHAAWCWAE
Sbjct: 45  CAYALREGQSQRFHRLPCGLDLEVIAQQPPAPATGGGGAAARPPLVFVHGSFHAAWCWAE 104

Query: 105 HWLPFFSSAGFPCYALSLRAQGESSVPPEKVAGTLETHTGDIADFIRKEVSLPPVLIGHS 164
           HWLPFFSSAGFPCYALSLRAQGESSVPPEKVAGTLETHTGDIADFIRKEVSLPPVLIGHS
Sbjct: 105 HWLPFFSSAGFPCYALSLRAQGESSVPPEKVAGTLETHTGDIADFIRKEVSLPPVLIGHS 164

Query: 165 FGGLIVQQYISCLGGSELLHPKLAGAVLVCSVPPSGNSGLVWRYLLTKPVAAIKVTLSLA 224
           FGGLIVQQYISCLGGSELLHPKLAGAVLVCSVPPSGNSGLVWRYLLTKPVAAIKVTLSLA
Sbjct: 165 FGGLIVQQYISCLGGSELLHPKLAGAVLVCSVPPSGNSGLVWRYLLTKPVAAIKVTLSLA 224

Query: 225 AKRFANSLSLCKETFFSPEMDDDLVQRYQGLMKDSSKLPLFDLRKLNASLPVASVPNNTV 284
           AKRFANSLSLCKETFFSPEMDDDLVQRYQGLMKDSSKLPLFDLRKLNASLPVASVPNNTV
Sbjct: 225 AKRFANSLSLCKETFFSPEMDDDLVQRYQGLMKDSSKLPLFDLRKLNASLPVASVPNNTV 284

Query: 285 NILVVGASSDFIVDAEGLSETARFYNVQPVCIEGIAHDMMLDCSWDKGAGIILSWLEKLT 344
           NILVVGASSDFIVDAEGLSETARFYNVQPVCIEGIAHDMMLDCSWDKGAGIILSWLEKLT
Sbjct: 285 NILVVGASSDFIVDAEGLSETARFYNVQPVCIEGIAHDMMLDCSWDKGAGIILSWLEKLT 344

Query: 345 PR 346
           PR
Sbjct: 345 PR 346



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.322    0.137    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,495,518
Number of extensions: 413050
Number of successful extensions: 893
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 892
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 244
Effective length of database: 11,709,973
Effective search space: 2857233412
Effective search space used: 2857233412
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)