BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0157500 Os03g0157500|AK073432
         (303 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0157500  Similar to FH protein interacting protein FIP2      543   e-155
Os10g0438000  BTB domain containing protein                       347   9e-96

>Os03g0157500 Similar to FH protein interacting protein FIP2
          Length = 303

 Score =  543 bits (1399), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 263/275 (95%), Positives = 263/275 (95%)

Query: 13  VLLNIGGKRYATTVETLTQREPSSMLAAMFSGRHTLPRHPDTGMVFVDRDGKHFRHVLNW 72
           VLLNIGGKRYATTVETLTQREPSSMLAAMFSGRHTLPRHPDTGMVFVDRDGKHFRHVLNW
Sbjct: 13  VLLNIGGKRYATTVETLTQREPSSMLAAMFSGRHTLPRHPDTGMVFVDRDGKHFRHVLNW 72

Query: 73  LRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDENFSEAELTRKDVIKCIQ 132
           LRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDENFSEAELTRKDVIKCIQ
Sbjct: 73  LRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDENFSEAELTRKDVIKCIQ 132

Query: 133 APRVRFRGVNXXXXXXXXXXXXEVDFSYACIKNANFSSAYLRKAKFRLTEATCSSFQSAN 192
           APRVRFRGVN            EVDFSYACIKNANFSSAYLRKAKFRLTEATCSSFQSAN
Sbjct: 133 APRVRFRGVNLSGLDLSKLDLSEVDFSYACIKNANFSSAYLRKAKFRLTEATCSSFQSAN 192

Query: 193 LHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAHLQGANLMGANLSGAN 252
           LHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAHLQGANLMGANLSGAN
Sbjct: 193 LHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAHLQGANLMGANLSGAN 252

Query: 253 LEGANLKGAKLAGTNLECANLQRAYLREVDLRETH 287
           LEGANLKGAKLAGTNLECANLQRAYLREVDLRETH
Sbjct: 253 LEGANLKGAKLAGTNLECANLQRAYLREVDLRETH 287



>Os10g0438000 BTB domain containing protein
          Length = 298

 Score =  347 bits (889), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 188/279 (67%), Positives = 217/279 (77%), Gaps = 5/279 (1%)

Query: 13  VLLNIGGKRYATTVETLTQREPSSMLAAMFSGR--HTLPRHPDTGMVFVDRDGKHFRHVL 70
           +LLNIGG RY TT +TLTQR+P S+LAA  SG   H LP   D G VFVDRDG+ FRHVL
Sbjct: 5   ILLNIGGSRYETTADTLTQRDPGSLLAAALSGAAAHGLPTTED-GAVFVDRDGELFRHVL 63

Query: 71  NWLRDGAVPDMSESEYQQLLREAEYYQLLGLADCINDRLGWKNDE--NFSEAELTRKDVI 128
           NWLRDGAVP ++++EY+QLLREAEYY+L GL DCI++R+   +D+    SEAELTRKDVI
Sbjct: 64  NWLRDGAVPALADAEYRQLLREAEYYRLPGLIDCISERIEDWDDKIGRSSEAELTRKDVI 123

Query: 129 KCIQAPRVRFRGVNXXXXXXXXXXXXEVDFSYACIKNANFSSAYLRKAKFRLTEATCSSF 188
           KCIQA +VRFRGVN            EVDFS  CI+   FS A L KAKFR  +A+ SSF
Sbjct: 124 KCIQADKVRFRGVNLSGLDLSKLDLSEVDFSCGCIEETKFSLANLYKAKFREVQASRSSF 183

Query: 189 QSANLHECELIGANLEGSVLDKANLQSANLQDACLKQCCFIETDLRSAHLQGANLMGANL 248
             ANL ECE +GANL+ S LD+ANLQSANLQDACL +C FIETDLRSAHLQ A+L GANL
Sbjct: 184 NYANLRECEFVGANLQESTLDRANLQSANLQDACLVKCSFIETDLRSAHLQRADLTGANL 243

Query: 249 SGANLEGANLKGAKLAGTNLECANLQRAYLREVDLRETH 287
           +GANLEGANLKGAKL+G+NL+ ANLQRAYLREVDLRET 
Sbjct: 244 TGANLEGANLKGAKLSGSNLQGANLQRAYLREVDLRETQ 282



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.133    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,465,651
Number of extensions: 327080
Number of successful extensions: 702
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 665
Number of HSP's successfully gapped: 4
Length of query: 303
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 203
Effective length of database: 11,814,401
Effective search space: 2398323403
Effective search space used: 2398323403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)