BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0714100 Os02g0714100|AK071194
(338 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0714100 Diacylglycerol acyltransferase family protein 604 e-173
Os06g0326700 Diacylglycerol acyltransferase family protein 500 e-142
>Os02g0714100 Diacylglycerol acyltransferase family protein
Length = 338
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 298/311 (95%), Positives = 298/311 (95%)
Query: 28 TTVFRGTAQPPVRTTVALALWLGAIHXXXXXXXXXXXXXPRRVAAMVLATQLFFMFAPVN 87
TTVFRGTAQPPVRTTVALALWLGAIH PRRVAAMVLATQLFFMFAPVN
Sbjct: 28 TTVFRGTAQPPVRTTVALALWLGAIHFNAFLLLASLFLFPRRVAAMVLATQLFFMFAPVN 87
Query: 88 DMSRLGRKIARFISKCVIGYFPVTLHVEDYKAFDPNRAYVFGYEPHSVLPIALGVLLELV 147
DMSRLGRKIARFISKCVIGYFPVTLHVEDYKAFDPNRAYVFGYEPHSVLPIALGVLLELV
Sbjct: 88 DMSRLGRKIARFISKCVIGYFPVTLHVEDYKAFDPNRAYVFGYEPHSVLPIALGVLLELV 147
Query: 148 GFMPLPKIKVLASSAVFYTPFLRQIWTWLGLVPASRKNFYSYLKAGYSCVIVPGGVQEML 207
GFMPLPKIKVLASSAVFYTPFLRQIWTWLGLVPASRKNFYSYLKAGYSCVIVPGGVQEML
Sbjct: 148 GFMPLPKIKVLASSAVFYTPFLRQIWTWLGLVPASRKNFYSYLKAGYSCVIVPGGVQEML 207
Query: 208 HMDHDSEVAFLKSRKGFVKIAMETGSPLVPVFAFGQSYVYKWWRPGGKLIVKIARAIKFT 267
HMDHDSEVAFLKSRKGFVKIAMETGSPLVPVFAFGQSYVYKWWRPGGKLIVKIARAIKFT
Sbjct: 208 HMDHDSEVAFLKSRKGFVKIAMETGSPLVPVFAFGQSYVYKWWRPGGKLIVKIARAIKFT 267
Query: 268 PIMFWGKFGTPIPFATPMHVVVGRPIEVKKNAQPTFDEINEVHEQFVVALQELFEKYKTK 327
PIMFWGKFGTPIPFATPMHVVVGRPIEVKKNAQPTFDEINEVHEQFVVALQELFEKYKTK
Sbjct: 268 PIMFWGKFGTPIPFATPMHVVVGRPIEVKKNAQPTFDEINEVHEQFVVALQELFEKYKTK 327
Query: 328 AGYPNLHLRVL 338
AGYPNLHLRVL
Sbjct: 328 AGYPNLHLRVL 338
>Os06g0326700 Diacylglycerol acyltransferase family protein
Length = 340
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/311 (76%), Positives = 263/311 (84%)
Query: 28 TTVFRGTAQPPVRTTVALALWLGAIHXXXXXXXXXXXXXPRRVAAMVLATQLFFMFAPVN 87
TVFRG RTTVALALWLG IH P RVAAMV+A QL FM P+N
Sbjct: 30 ATVFRGADYSLPRTTVALALWLGGIHFNVFLVLASLFLFPLRVAAMVVAFQLLFMLIPLN 89
Query: 88 DMSRLGRKIARFISKCVIGYFPVTLHVEDYKAFDPNRAYVFGYEPHSVLPIALGVLLELV 147
D +LGRKIARFI + +GYFP++LHVEDYK FDPNRAYVFG+EPHSVLPI + L +LV
Sbjct: 90 DKDKLGRKIARFICRYAMGYFPISLHVEDYKCFDPNRAYVFGFEPHSVLPIGVAALADLV 149
Query: 148 GFMPLPKIKVLASSAVFYTPFLRQIWTWLGLVPASRKNFYSYLKAGYSCVIVPGGVQEML 207
GFMPLPKIKVLASSAVFYTPFLRQIWTWLGL+PA+RKNF SYL AGYSC+IVPGGVQE+L
Sbjct: 150 GFMPLPKIKVLASSAVFYTPFLRQIWTWLGLIPATRKNFQSYLGAGYSCIIVPGGVQEIL 209
Query: 208 HMDHDSEVAFLKSRKGFVKIAMETGSPLVPVFAFGQSYVYKWWRPGGKLIVKIARAIKFT 267
HMDHDSE+AFLKSRKGFVKIAM++G PLVPVF FGQSY YKWWRP GKL VKIARAIKFT
Sbjct: 210 HMDHDSEIAFLKSRKGFVKIAMQSGCPLVPVFCFGQSYAYKWWRPKGKLFVKIARAIKFT 269
Query: 268 PIMFWGKFGTPIPFATPMHVVVGRPIEVKKNAQPTFDEINEVHEQFVVALQELFEKYKTK 327
PI+FWG++GTPIPF TPMHVVVGRPIEV+KN+QPT DEINEVHEQF VALQ+LF+KYKT+
Sbjct: 270 PIVFWGRYGTPIPFPTPMHVVVGRPIEVEKNSQPTIDEINEVHEQFTVALQDLFDKYKTE 329
Query: 328 AGYPNLHLRVL 338
GYP LHLRVL
Sbjct: 330 TGYPGLHLRVL 340
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.142 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,386,123
Number of extensions: 430278
Number of successful extensions: 947
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 947
Number of HSP's successfully gapped: 2
Length of query: 338
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 237
Effective length of database: 11,762,187
Effective search space: 2787638319
Effective search space used: 2787638319
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 156 (64.7 bits)