BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0755100 Os01g0755100|AK066203
         (735 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os01g0755100  Conserved hypothetical protein                     1496   0.0  

>Os01g0755100 Conserved hypothetical protein
          Length = 735

 Score = 1496 bits (3873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 735/735 (100%), Positives = 735/735 (100%)

Query: 1   MDESRKRAASTANAKSSSLGEDFGNDFLSSWKLPKSGNDTIDFDVESVPKNSKKFSFDNL 60
           MDESRKRAASTANAKSSSLGEDFGNDFLSSWKLPKSGNDTIDFDVESVPKNSKKFSFDNL
Sbjct: 1   MDESRKRAASTANAKSSSLGEDFGNDFLSSWKLPKSGNDTIDFDVESVPKNSKKFSFDNL 60

Query: 61  DDFGLDGAFDKLSSFKMGMSDLDFSGPLKKKVKPNNSNGNDLSEGIKGTEKDNFSFSFDF 120
           DDFGLDGAFDKLSSFKMGMSDLDFSGPLKKKVKPNNSNGNDLSEGIKGTEKDNFSFSFDF
Sbjct: 61  DDFGLDGAFDKLSSFKMGMSDLDFSGPLKKKVKPNNSNGNDLSEGIKGTEKDNFSFSFDF 120

Query: 121 NELGKFNLDANLGIEENGMSKFVEKVNPVSSEGDKDPRKGLSVKGSDVLGGNISKEQKQT 180
           NELGKFNLDANLGIEENGMSKFVEKVNPVSSEGDKDPRKGLSVKGSDVLGGNISKEQKQT
Sbjct: 121 NELGKFNLDANLGIEENGMSKFVEKVNPVSSEGDKDPRKGLSVKGSDVLGGNISKEQKQT 180

Query: 181 HDACTLRPTHLGSFSPARMDQNKVDLLSTDTHEEKSNETHPSRAAVNKPSQNLPCSSTPG 240
           HDACTLRPTHLGSFSPARMDQNKVDLLSTDTHEEKSNETHPSRAAVNKPSQNLPCSSTPG
Sbjct: 181 HDACTLRPTHLGSFSPARMDQNKVDLLSTDTHEEKSNETHPSRAAVNKPSQNLPCSSTPG 240

Query: 241 EDPTHVTTTAVAENCREAPLVELSKVHISRGNNDSGQSVSSQFMNTSTTCPSISRKLTAQ 300
           EDPTHVTTTAVAENCREAPLVELSKVHISRGNNDSGQSVSSQFMNTSTTCPSISRKLTAQ
Sbjct: 241 EDPTHVTTTAVAENCREAPLVELSKVHISRGNNDSGQSVSSQFMNTSTTCPSISRKLTAQ 300

Query: 301 SDSQNDQNEIVGESACLNAQSPDNQRFRGTSMKLLKKTSCETKKAEKGTSGPKSLSSSMQ 360
           SDSQNDQNEIVGESACLNAQSPDNQRFRGTSMKLLKKTSCETKKAEKGTSGPKSLSSSMQ
Sbjct: 301 SDSQNDQNEIVGESACLNAQSPDNQRFRGTSMKLLKKTSCETKKAEKGTSGPKSLSSSMQ 360

Query: 361 RDMRNVKPASLNEAGSLSLPPQSSIVKASRPPQLTSETTLNQLSSANNMVKKMNTHSTEL 420
           RDMRNVKPASLNEAGSLSLPPQSSIVKASRPPQLTSETTLNQLSSANNMVKKMNTHSTEL
Sbjct: 361 RDMRNVKPASLNEAGSLSLPPQSSIVKASRPPQLTSETTLNQLSSANNMVKKMNTHSTEL 420

Query: 421 KRESTQANARSERPKIASSKTFCKPALHELLTTSMNAKDHKNSKLRLESPSTGNVSTLNA 480
           KRESTQANARSERPKIASSKTFCKPALHELLTTSMNAKDHKNSKLRLESPSTGNVSTLNA
Sbjct: 421 KRESTQANARSERPKIASSKTFCKPALHELLTTSMNAKDHKNSKLRLESPSTGNVSTLNA 480

Query: 481 PSSPAHSNGHKTVASRSLLGSTNVFDAGKGTPKADNRPLSQLKAAKITKAGTISSKSDLL 540
           PSSPAHSNGHKTVASRSLLGSTNVFDAGKGTPKADNRPLSQLKAAKITKAGTISSKSDLL
Sbjct: 481 PSSPAHSNGHKTVASRSLLGSTNVFDAGKGTPKADNRPLSQLKAAKITKAGTISSKSDLL 540

Query: 541 LEKDMMETSGRKGSPVTTSNNPKSYGEGKYVLPSPSMMQKTPKESASDPKAPAMLKHIMK 600
           LEKDMMETSGRKGSPVTTSNNPKSYGEGKYVLPSPSMMQKTPKESASDPKAPAMLKHIMK
Sbjct: 541 LEKDMMETSGRKGSPVTTSNNPKSYGEGKYVLPSPSMMQKTPKESASDPKAPAMLKHIMK 600

Query: 601 SPAVRTSPETVSELGNKTIPGSGTPKARMDNAIASAISCEMGEISELELPALLENDVNVQ 660
           SPAVRTSPETVSELGNKTIPGSGTPKARMDNAIASAISCEMGEISELELPALLENDVNVQ
Sbjct: 601 SPAVRTSPETVSELGNKTIPGSGTPKARMDNAIASAISCEMGEISELELPALLENDVNVQ 660

Query: 661 KAEACRKELEDLCISLKRKHEEAKELAVRAIVNNNTMLMLNHPMFEDKICALQKFASNLR 720
           KAEACRKELEDLCISLKRKHEEAKELAVRAIVNNNTMLMLNHPMFEDKICALQKFASNLR
Sbjct: 661 KAEACRKELEDLCISLKRKHEEAKELAVRAIVNNNTMLMLNHPMFEDKICALQKFASNLR 720

Query: 721 SKKVLFEDISAIDAH 735
           SKKVLFEDISAIDAH
Sbjct: 721 SKKVLFEDISAIDAH 735



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.307    0.123    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,421,969
Number of extensions: 1063968
Number of successful extensions: 3246
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3244
Number of HSP's successfully gapped: 1
Length of query: 735
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 627
Effective length of database: 11,396,689
Effective search space: 7145724003
Effective search space used: 7145724003
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 160 (66.2 bits)