BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0632700 Os12g0632700|AK065955
(356 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22780.1 | chr2:9689995-9691923 REVERSE LENGTH=355 577 e-165
AT5G09660.4 | chr5:2993691-2995551 REVERSE LENGTH=364 477 e-135
AT1G53240.1 | chr1:19854966-19856802 REVERSE LENGTH=342 440 e-124
AT3G15020.1 | chr3:5056139-5057941 FORWARD LENGTH=342 436 e-123
AT3G47520.1 | chr3:17513657-17514868 FORWARD LENGTH=404 411 e-115
AT4G17260.1 | chr4:9674057-9675309 FORWARD LENGTH=354 67 1e-11
AT3G53910.1 | chr3:19959856-19960446 REVERSE LENGTH=109 59 6e-09
AT5G43330.1 | chr5:17390552-17392449 FORWARD LENGTH=333 56 3e-08
AT1G04410.1 | chr1:1189418-1191267 REVERSE LENGTH=333 53 2e-07
>AT2G22780.1 | chr2:9689995-9691923 REVERSE LENGTH=355
Length = 354
Score = 577 bits (1488), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/348 (81%), Positives = 309/348 (88%), Gaps = 2/348 (0%)
Query: 11 MERLASHLRPP--ASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNP 68
+ R+++HL PP +Q+ + L CRAKG +PGFKVAILGA+GGIGQPLA+LMKMNP
Sbjct: 7 IARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNP 66
Query: 69 LVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGKPQLENALTGMDLVIIPAGVPRKPGM 128
LVSVLHLYDV N PGVTADISHM+T AVVRGFLG+PQLE ALTGMDLVIIPAGVPRKPGM
Sbjct: 67 LVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGM 126
Query: 129 TRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLG 188
TRDDLFNINAGIVRTL E IAKCCP AIVN+ISNPVNSTVPIAAEVFKKAGT+DPK+L+G
Sbjct: 127 TRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDPKKLMG 186
Query: 189 VTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTT 248
VT LDVVRANTFVAEV+ LDPR+V VPV+GGHAGVTILPLLSQV PPCSFT +EI YLT
Sbjct: 187 VTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEIEYLTD 246
Query: 249 RIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFF 308
RIQNGGTEVVEAKAGAGSATLSMAYAA +FADACLRGLRGDA IVEC++VAS VTELPFF
Sbjct: 247 RIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVTELPFF 306
Query: 309 ASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356
ASKVRLGRCGI+E+ LGPLNE+ER GLEKAKKEL+ SI KGV F K
Sbjct: 307 ASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354
>AT5G09660.4 | chr5:2993691-2995551 REVERSE LENGTH=364
Length = 363
Score = 477 bits (1227), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/303 (81%), Positives = 271/303 (89%), Gaps = 4/303 (1%)
Query: 1 MEDXXXXXXXMERLASHLRPPASQME-ESPLLRGSNCRAKGAAPGFKVAILGASGGIGQP 59
ME + R+++HL P QME ++ ++ NCRAKG PGFKVAILGA+GGIGQ
Sbjct: 1 MEFRGDANQRIARISAHLTP---QMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQS 57
Query: 60 LALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGKPQLENALTGMDLVIIP 119
L+LLMKMNPLVS+LHLYDVVN PGVTAD+SHM+TGAVVRGFLG QLE+ALTGMDLVIIP
Sbjct: 58 LSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIP 117
Query: 120 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAG 179
AG+PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNAIVN+ISNPVNSTVPIAAEVFKKAG
Sbjct: 118 AGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAG 177
Query: 180 TYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFT 239
TYDPK+LLGVTTLDV RANTFVAEVLGLDPR+V+VPV+GGHAGVTILPLLSQV PP SFT
Sbjct: 178 TYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFT 237
Query: 240 SEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVA 299
+EI YLT RIQNGGTEVVEAKAGAGSATLSMAYAA+KFADACLRGLRGDA +VECSFVA
Sbjct: 238 PQEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVA 297
Query: 300 SQV 302
SQV
Sbjct: 298 SQV 300
>AT1G53240.1 | chr1:19854966-19856802 REVERSE LENGTH=342
Length = 341
Score = 440 bits (1132), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/319 (67%), Positives = 255/319 (79%)
Query: 38 AKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVV 97
+ G+ P KVAILGA+GGIGQPLALLMK+NPLVS L LYD+ NTPGV AD+ H+NT + V
Sbjct: 23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEV 82
Query: 98 RGFLGKPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIV 157
G++G L AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ LC IAK CP+A++
Sbjct: 83 VGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALI 142
Query: 158 NVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVI 217
N+ISNPVNSTVPIAAE+FKKAG YD K+L GVTTLDVVRA TF A + +VNVPVI
Sbjct: 143 NMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVI 202
Query: 218 GGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASK 277
GGHAGVTILPL SQ P + +S+ ++ LT R Q+GGTEVVEAKAG GSATLSMAYA +
Sbjct: 203 GGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAL 262
Query: 278 FADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLE 337
FADACL+GL G ++ECS+V S +TELPFFASKVRLG+ G+EE+L LGPL++FE+ GLE
Sbjct: 263 FADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322
Query: 338 KAKKELAESIQKGVAFINK 356
K EL SI+KGV F N+
Sbjct: 323 ALKPELKSSIEKGVKFANQ 341
>AT3G15020.1 | chr3:5056139-5057941 FORWARD LENGTH=342
Length = 341
Score = 436 bits (1121), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/335 (65%), Positives = 260/335 (77%), Gaps = 3/335 (0%)
Query: 22 ASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNT 81
AS +++ L RG A + P KV ILGA+GGIGQPL+LLMK+NPLVS L LYD+ NT
Sbjct: 10 ASPVKQGLLRRGF---ASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANT 66
Query: 82 PGVTADISHMNTGAVVRGFLGKPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 141
PGV AD+ H+NT + V G++G L AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV
Sbjct: 67 PGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIV 126
Query: 142 RTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFV 201
+ L IAK CP A+VN+ISNPVNSTVPIAAE+FKKAGTYD K+L GVTTLDVVRA TF
Sbjct: 127 KNLSIAIAKYCPQALVNMISNPVNSTVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFY 186
Query: 202 AEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAK 261
A ++ +VNVPV+GGHAG+TILPL SQ +P + + + I LT R Q+GGTEVVEAK
Sbjct: 187 AGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAK 246
Query: 262 AGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEE 321
AG GSATLSMAYA + FADACL+GL G +VECSFV S +TELPFFASKVRLG+ G+EE
Sbjct: 247 AGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEE 306
Query: 322 ILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356
+L LGPL++FE+ GLE K EL SI+KG+ F N+
Sbjct: 307 VLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ 341
>AT3G47520.1 | chr3:17513657-17514868 FORWARD LENGTH=404
Length = 403
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/332 (61%), Positives = 252/332 (75%), Gaps = 11/332 (3%)
Query: 31 LRGSNCRAKGAAP---------GFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNT 81
LRGS +A+ + +KVA+LGA+GGIGQPL+LL+KM+PLVS LHLYD+ N
Sbjct: 60 LRGSVTKAQTSDKKPYGFKINASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANV 119
Query: 82 PGVTADISHMNTGAVVRGFLGKPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV 141
GV AD+SH NT + VR F G +L + L +++V+IPAGVPRKPGMTRDDLFNINA IV
Sbjct: 120 KGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIV 179
Query: 142 RTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFV 201
+TL E +A+ CPNA +++ISNPVNSTVPIAAEV KK G YDPK+L GVTTLDVVRANTFV
Sbjct: 180 KTLVEAVAENCPNAFIHIISNPVNSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFV 239
Query: 202 AEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTSEEISYLTTRIQNGGTEVVEAK 261
++ L DV+VPVIGGHAG+TILPLLS+ P +FT EEI LT RIQN GTEVV+AK
Sbjct: 240 SQKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAK 299
Query: 262 AGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEE 321
AGAGSATLSMAYAA++F ++ LR L GD + ECSFV S +T+LPFFAS+V++G+ G+E
Sbjct: 300 AGAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGLEA 359
Query: 322 IL--SLGPLNEFERAGLEKAKKELAESIQKGV 351
++ L L E+E+ LE K EL SI KGV
Sbjct: 360 VIESDLQGLTEYEQKALEALKVELKASIDKGV 391
>AT4G17260.1 | chr4:9674057-9675309 FORWARD LENGTH=354
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 19/246 (7%)
Query: 112 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIA 171
G DL I+ AG + PG +R +L N + R + +AK P++I+ ++SNPV+ +A
Sbjct: 108 GSDLCIVTAGARQNPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVA 167
Query: 172 AEVFKKAGTYDPKRLLGV-TTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLS 230
+K +G + R+LG T LD R +A+ L ++ +DV ++G H G + + L S
Sbjct: 168 ---WKLSG-FPVNRVLGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEH-GDSSVALWS 222
Query: 231 QVN----PPCSFTSE-EISYLTTRIQNGGTEVV----EAKAGAGSATLSMAYAASKFADA 281
++ P SF + +I+Y +++ VV E G + ++ Y+ + A
Sbjct: 223 SISVGGIPVLSFLEKNQIAYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLART 282
Query: 282 CLRGLR--GDAGIVECSFVASQVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKA 339
LR R ++ F ++ F + LGR G+ + ++ +E E L+K+
Sbjct: 283 ILRDQRKIHPVTVLARGFYGVDGGDV-FLSLPALLGRNGVVAVTNVHMTDE-EAEKLQKS 340
Query: 340 KKELAE 345
K + E
Sbjct: 341 AKTILE 346
>AT3G53910.1 | chr3:19959856-19960446 REVERSE LENGTH=109
Length = 108
Score = 58.5 bits (140), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 270 SMAYAASKFADACLRGLRGDAGIVECSFVASQVTELPFFASKVRLGRCGIEEIL--SLGP 327
S YA F + +R L GD + + +FVAS VTELP+FA++ ++G+ IEE++ L
Sbjct: 6 SDPYAMISFLKSLIRALDGDDDVFDFAFVASSVTELPYFATRTKIGKKRIEEVIDSDLQG 65
Query: 328 LNEFERAGLEKAKKELAESIQKGVAFINK 356
L ++E ++ K + +I+K + + +
Sbjct: 66 LAKYEERAIKAIKPRVKVTIEKDITLLQR 94
>AT5G43330.1 | chr5:17390552-17392449 FORWARD LENGTH=333
Length = 332
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 46 KVAILGASGGIGQPLALLMKMNPLVS-----VLHLYDVVNTPGVTADISHMNTGA---VV 97
+V + GA+G IG L ++ ++ +LH+ D+ + A ++
Sbjct: 7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFPLL 66
Query: 98 RGFLGKPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAI 156
+G + A TG+++ ++ G PRK GM R D+ + N I ++ + K PN
Sbjct: 67 KGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCK 126
Query: 157 VNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPV 216
V V++NP N+ I E A + K + +T LD RA V+E L + DV +
Sbjct: 127 VLVVANPANTNALILKEF---APSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVI 183
Query: 217 IGGHAGVTILP 227
I G+ T P
Sbjct: 184 IWGNHSSTQYP 194
>AT1G04410.1 | chr1:1189418-1191267 REVERSE LENGTH=333
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 46 KVAILGASGGIGQPLALLMKMNPLVS-----VLHLYDVVNTPGVTADISHMNTGA---VV 97
+V + GA+G IG L ++ ++ +LH+ D+ + A ++
Sbjct: 7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFPLL 66
Query: 98 RGFLGKPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAI 156
+G + TG+++ ++ G PRK GM R D+ + N I ++ + K PN
Sbjct: 67 KGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCK 126
Query: 157 VNVISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTTLDVVRANTFVAEVLGLDPRDV-NVP 215
V V++NP N+ I E A + K + +T LD RA ++E L + DV NV
Sbjct: 127 VLVVANPANTNALILKEF---APSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVI 183
Query: 216 VIGGHA 221
+ G H+
Sbjct: 184 IWGNHS 189
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,103,229
Number of extensions: 288531
Number of successful extensions: 708
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 705
Number of HSP's successfully gapped: 9
Length of query: 356
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 256
Effective length of database: 8,364,969
Effective search space: 2141432064
Effective search space used: 2141432064
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)