BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0630100 Os12g0630100|AK069182
(182 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245 146 5e-36
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 118 2e-27
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 116 8e-27
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 114 3e-26
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 112 1e-25
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 107 2e-24
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 105 2e-23
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 103 4e-23
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 102 9e-23
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 102 1e-22
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 98 2e-21
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 97 4e-21
AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257 95 2e-20
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 95 2e-20
AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250 95 2e-20
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 95 2e-20
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 93 6e-20
AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295 90 7e-19
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 85 2e-17
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 84 5e-17
AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800 74 3e-14
AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854 52 2e-07
AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209 49 2e-06
>AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245
Length = 244
Score = 146 bits (369), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 107/202 (52%), Gaps = 51/202 (25%)
Query: 30 TFTITNRCSFTVWPAATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDGAGRGRC 89
TF I N+CS+TVW AA+P GGG +L+ GQ+W ++V AGT R+WGRT C+FD +GRGRC
Sbjct: 24 TFEILNQCSYTVWAAASP-GGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRC 82
Query: 90 ATGDCGGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSFS--------- 140
TGDC G L C GQPP TLAE+ L N DFY++S++DG+N+ M FS
Sbjct: 83 QTGDCSGGLQCTGWGQPPNTLAEYALN-QFNNLDFYDISLVDGFNIPMEFSPTSSNCHRI 141
Query: 141 -CSSGVTLTCR---------------------------------------ERSCPDAYQY 160
C++ + C ++ CPDAY Y
Sbjct: 142 LCTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSY 201
Query: 161 PSDDSKLRSCNGNSNYRVVFCP 182
P DD N+NYRVVFCP
Sbjct: 202 PQDDPTSTFTCTNTNYRVVFCP 223
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 75/119 (63%), Gaps = 9/119 (7%)
Query: 30 TFTITNRCSFTVWPAATP----VGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDGAG 85
FTI N C T+WPA TP GGG +L PGQ+ + P G S GR+WGRTGC FD G
Sbjct: 90 VFTIINSCDQTIWPAITPGENFNGGGFELKPGQSIVFHAPVGWS-GRIWGRTGCKFDSTG 148
Query: 86 RGRCATGDCGGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSFSCSSG 144
G C TG CG L C SG+PP +LAEFTL DFY++S++DG+N+ MS + +G
Sbjct: 149 TGTCETGSCGSTLKCSASGKPPASLAEFTLAA----LDFYDVSLVDGFNLPMSVTPMNG 203
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 87/150 (58%), Gaps = 19/150 (12%)
Query: 30 TFTITNRCSFTVWPAATP-------VGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
T N+C++TVWP P GGG +L+P + +T+ +P SGR WGR GCSFD
Sbjct: 43 TVIFYNKCTYTVWPGIQPSSGQSLLAGGGFKLSPNRAYTLQLPP-LWSGRFWGRHGCSFD 101
Query: 83 GAGRGRCATGDCGGALSCR-LSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF-- 139
+GRGRCATGDCGG+ C G PP TLAE TLG + DFY++S++DGYN+AMS
Sbjct: 102 RSGRGRCATGDCGGSFLCNGAGGVPPATLAEITLGH---DMDFYDVSLVDGYNLAMSIMP 158
Query: 140 -----SCSSGVTLTCRERSCPDAYQYPSDD 164
C+ ++ R CP Q S D
Sbjct: 159 VKGTGKCTYAGCVSDLNRMCPVGLQVRSRD 188
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Query: 30 TFTITNRCSFTVWP------AATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
FT+ N C++TVWP + T GG L PG + + P G S GR W RTGC+FD
Sbjct: 25 VFTLQNSCAYTVWPGTLSGNSITLGDGGFPLTPGASVQLTAPTGWS-GRFWARTGCNFDA 83
Query: 84 AGRGRCATGDCGGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
+G G C TGDCGG L C G PP TLAEFT+G+S DFY++S++DGYNV M
Sbjct: 84 SGHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAGMDFYDVSLVDGYNVKM 137
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 72/114 (63%), Gaps = 8/114 (7%)
Query: 30 TFTITNRCSFTVWPAA------TPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
FT+ N C +TVWP T GG L PG + + PAG S GR W RTGC+FD
Sbjct: 26 VFTLQNSCPYTVWPGILSGNDNTLGDGGFPLTPGASVQLTAPAGWS-GRFWARTGCNFDA 84
Query: 84 AGRGRCATGDCGGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
+G G C TGDCGG L C G PP+TLAEFTL GG +DFY++S++DGYNV M
Sbjct: 85 SGHGNCGTGDCGGVLKCNGGGVPPVTLAEFTLVGDGG-KDFYDVSLVDGYNVEM 137
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 89/167 (53%), Gaps = 29/167 (17%)
Query: 30 TFTITNRCSFTVWPAATP-------VGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
T N+C VWP P GGG +L + ++ +P SGR WGR GC+FD
Sbjct: 23 TVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPP-LWSGRFWGRHGCTFD 81
Query: 83 GAGRGRCATGDCGGALSCR-LSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF-- 139
+GRG CATGDCGG+LSC G+PP TLAE TLG DFY++S++DGYN+AMS
Sbjct: 82 RSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGP---ELDFYDVSLVDGYNLAMSIMP 138
Query: 140 -----SCSSGVTLTCRERSCPDAYQYPSDDSKLRSCNGNSNYRVVFC 181
CS ++ + CP Q +RS NG RVV C
Sbjct: 139 VKGSGQCSYAGCVSDLNQMCPVGLQ-------VRSRNGK---RVVAC 175
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 76/121 (62%), Gaps = 11/121 (9%)
Query: 31 FTITNRCSFTVWPAATPVG-------GGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
FT+ N C TVW A T G GG +L PG + + PAG S GR W RTGC+FD
Sbjct: 26 FTLRNNCPTTVW-AGTLAGQGPKLGDGGFELTPGASRQLTAPAGWS-GRFWARTGCNFDA 83
Query: 84 AGRGRCATGDCGGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSFSCSS 143
+G GRC TGDCGG L C G PP+TLAEFTL GG +DFY++S++DGYNV + S
Sbjct: 84 SGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGG-KDFYDVSLVDGYNVKLGIRPSG 141
Query: 144 G 144
G
Sbjct: 142 G 142
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 73/117 (62%), Gaps = 11/117 (9%)
Query: 30 TFTITNRCSFTVWPAATPVGGGTQ--------LNPGQTWTINVPAGTSSGRVWGRTGCSF 81
TF ITN C FT+WP T G GTQ L+ GQ+ I G S GR+W RTGC+F
Sbjct: 26 TFVITNNCPFTIWPG-TLAGSGTQPLPTTGFRLDVGQSVRIPTALGWS-GRIWARTGCNF 83
Query: 82 DGAGRGRCATGDCGGALSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
D G G+C TGDCGG L C +G PP +L E TLG ++DFY++S++DGYN+ +
Sbjct: 84 DANGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDVSLVDGYNLPI 140
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 93/221 (42%), Gaps = 70/221 (31%)
Query: 30 TFTITNRCSFTVWPAATPVGG------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
TFT+TN C T+WP G G L G + T V G S GR W RT C+FD
Sbjct: 27 TFTLTNHCGSTIWPGILTANGAQLGDGGFALASGSSVTFTVSPGWS-GRFWARTYCNFDA 85
Query: 84 AGRGRCATGDCGGALSCR-LSGQPPLTLAEFTLGTSGGN---RDFYNLSVIDGYNVAMSF 139
+G G+C TGDCG L C G PP TLAEFT+G+SG +DFY++S++DGYNV M
Sbjct: 86 SGSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMKI 145
Query: 140 S------------CSSGVTLTCRE------------------------------------ 151
+ C S V C +
Sbjct: 146 TPQGGSGDCKTAGCVSDVNAICPKELQVTGPSGVAACKSACEAFNKPEYCCTGAYSTPAT 205
Query: 152 -----------RSCPDAYQYPSDDSKLRSCNGNSNYRVVFC 181
++CP AY Y DD+ N+NY + FC
Sbjct: 206 CPPTNYSKIFKQACPSAYSYAYDDASSTFTCTNANYEISFC 246
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 71/117 (60%), Gaps = 12/117 (10%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
TFT NRC +TVWP G G +L G + ++ P G S GR W RTGC FD
Sbjct: 31 TFTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWS-GRFWARTGCKFD 89
Query: 83 GAGRGRCATGDCGG-ALSCR-LSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
+G G C TGDCG A+ C L PP+TLAEFTLGT G DFY++S++DGYN+ M
Sbjct: 90 SSGSGTCKTGDCGSNAVECAGLGAAPPVTLAEFTLGT--GGDDFYDVSLVDGYNIPM 144
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 85/154 (55%), Gaps = 19/154 (12%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
+FT +N+C +TVWP G G L G+T TIN P+ + GR WGRT CS D
Sbjct: 21 SFTFSNKCDYTVWPGILSNAGVSPLPTTGFVLLKGETRTINAPS-SWGGRFWGRTLCSTD 79
Query: 83 GAGRGRCATGDCG-GALSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF- 139
G+ CATGDCG G + C +G PP TLAEFTL SGG DFY++S++DGYNV M
Sbjct: 80 SDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGG-LDFYDVSLVDGYNVQMLVV 138
Query: 140 -------SCSSGVTLTCRERSCPDAYQYPSDDSK 166
+CSS + SCP + S D K
Sbjct: 139 PQGGSGQNCSSTGCVVDLNGSCPSELRVNSVDGK 172
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
T TI NRCSFTVWP G G +L PG + + PA + SGR W RTGC+F+
Sbjct: 34 TITIVNRCSFTVWPGILSNSGSGDIGTTGFELVPGGSRSFQAPA-SWSGRFWARTGCNFN 92
Query: 83 G-AGRGRCATGDCGG-ALSCRLSG-QPPLTLAEFTLGTSGGN----RDFYNLSVIDGYNV 135
G+G C TGDCG + C +G +PP TLAEFT+G+ + +DFY++S++DGYNV
Sbjct: 93 SDTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDFYDVSLVDGYNV 152
Query: 136 AMSFSCSSGVTLTCRERSC 154
M S G TC C
Sbjct: 153 PMLVEASGGSEGTCLTTGC 171
>AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257
Length = 256
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 30 TFTITNRCSFTVWPAATP-------VGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
TF + N+CSF +WPA P GG L G I+ P G S GR+W RTGC F
Sbjct: 29 TFYVQNKCSFPIWPAVAPNSGHPVLASGGFYLPCGGIKRIDAPLGWS-GRIWARTGCDFT 87
Query: 83 GAGRGRCATGDCGGALSCR-LSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYN---VAMS 138
+ C TGDC G L C L G+PP TL + + +FY++S++DGYN V S
Sbjct: 88 SNSKQACETGDCDGHLECNGLIGKPPATLIQIAVQADKSKPNFYDVSLVDGYNLPVVVNS 147
Query: 139 FSCSSGVT-LTCRER---SCPDAYQYPSDDSKLRSCN 171
SS T L C + +CP+ Q +++ ++ +C
Sbjct: 148 KPVSSKCTILGCHKDLKTTCPEELQVLNEEGRVVACK 184
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
TFTI N+CS+TVWP G G LNP +T I +PA SGR+WGRT C+ D
Sbjct: 24 TFTIVNQCSYTVWPGLLSGAGTSPLPTTGFSLNPTETRVIPIPAAW-SGRIWGRTLCTQD 82
Query: 83 G-AGRGRCATGDCGGA-LSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF 139
GR C TGDCG + + C SG PP TLAEFTL + G DFY++S++DGYN+ M+
Sbjct: 83 ATTGRFTCITGDCGSSTVECSGSGAAPPATLAEFTLNGANG-LDFYDVSLVDGYNIPMTI 141
>AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250
Length = 249
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 81/158 (51%), Gaps = 19/158 (12%)
Query: 31 FTITNRCSFTVWPAATPVGGGTQLNPG----QTWT---INVPAGTSSGRVWGRTGCSFDG 83
T+ N C FTVWPA P G L G T+T NVP SGR+W RT C+
Sbjct: 29 LTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCAHYN 88
Query: 84 AGRGRCATGDCGGALSCR-LSGQPPLTLAEFTLGTSGGNRDF--YNLSVIDGYNVAMSFS 140
G+ C TGDCG L C L G PP +LA+F L GG+ DF Y +S++DGYNV M+ +
Sbjct: 89 -GKFSCLTGDCGNRLECNGLGGAPPASLAQFDLH-HGGHHDFSSYGVSLVDGYNVPMTVT 146
Query: 141 CSSGV----TLTCRE---RSCPDAYQYPSDDSKLRSCN 171
G + CRE ++CP Q S + +C
Sbjct: 147 PHEGHGVCPVVGCREDLIKTCPAHLQVRSHSGHVVACK 184
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 72/116 (62%), Gaps = 11/116 (9%)
Query: 31 FTITNRCSFTVWP-------AATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
FTI N+C +TVWP A + G L G++ INVP + SGR+WGR+ CS
Sbjct: 27 FTIENKCDYTVWPGFLTMTTAVSLPTNGFSLKKGESRVINVPP-SWSGRLWGRSFCSTSS 85
Query: 84 AGRGRCATGDCG-GALSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
G CATGDCG G + C SG +PP TL +FTL + G +DFY++SV+DGYN+ +
Sbjct: 86 TGNFSCATGDCGSGKIECSDSGARPPTTLIDFTLDATDG-QDFYDVSVVDGYNLPL 140
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
+F + N+C +TVWP G G L G+ TI+ P + GR WGRT CS D
Sbjct: 24 SFIMVNKCEYTVWPGLLSNAGVPPLPTTGFVLQKGEERTISAPT-SWGGRFWGRTQCSTD 82
Query: 83 GAGRGRCATGDCG-GALSCRLSGQ-PPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSFS 140
G+ C TGDCG G L C SG PP TLAEFTL S G DFY++S++DGYNV M +
Sbjct: 83 TDGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNG-LDFYDVSLVDGYNVPMLVA 141
Query: 141 CSSGVTLTCRERSC 154
G L C C
Sbjct: 142 PQGGSGLNCSSTGC 155
>AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295
Length = 294
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 31 FTITNRCSFTVWP-------AATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDG 83
I N C ++WP TP GG + G+ I+VP SGR+WGR GC+F+
Sbjct: 23 LIIVNNCQESIWPGILGGGGQITPRNGGFHMGSGEETIIDVP-DKWSGRIWGRQGCTFNQ 81
Query: 84 AGRGRCATGDCG-GALSCR-LSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSFS 140
G+G C TGDC G+++C+ G PP T+ E TLG+S FY++S++DG+N+ +S
Sbjct: 82 NGKGSCQTGDCNDGSINCQGTGGVPPATVVEMTLGSSSSPLHFYDVSLVDGFNLPVSMK 140
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 75/118 (63%), Gaps = 12/118 (10%)
Query: 30 TFTITNRCSFTVWP-------AATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
+F ITNRC T+WP +A G +L+ G++ T+ +P + SGR+W RT CS D
Sbjct: 24 SFKITNRCRNTIWPGLLSGANSAPLPTTGFRLSRGKSKTVAIPE-SWSGRLWARTLCSQD 82
Query: 83 -GAGRGRCATGDCG-GALSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
+G C TGDCG G + C SG +PP TLAEFTL +GG DFY++S++DGYN+ M
Sbjct: 83 RSSGSFVCLTGDCGSGKVECSGSGAKPPATLAEFTLNGTGG-LDFYDVSLVDGYNLPM 139
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 12/120 (10%)
Query: 30 TFTITNRCSFTVWPAATPVGG-------GTQLNPGQTWTINVPAGTSSGRVWGRTGCSFD 82
TFTI N+C++TVWP G G LN ++ I++PA SGR+WGRT C+ +
Sbjct: 24 TFTIVNQCNYTVWPGLLSGAGTAPLPTTGFSLNSFESRLISIPAAW-SGRIWGRTLCNQN 82
Query: 83 G-AGRGRCATGDCGGA-LSCRLSGQ-PPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF 139
G C TGDCG + + C +G PP TLAEFTL N DFY++S++DGYN+ M+
Sbjct: 83 EITGIFTCVTGDCGSSQIECSGAGAIPPATLAEFTL-NGAENLDFYDVSLVDGYNIPMTI 141
>AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800
Length = 799
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 30 TFTITNRCSFTVWPAA-----TPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDGA 84
+FTI N+C +T+WPA + G L G+T TI P+ + GR WGRT CS +
Sbjct: 146 SFTIENKCQYTIWPATYGYRRSLETTGFVLEKGETRTIKAPS-SWIGRFWGRTLCSTNST 204
Query: 85 GRGRCATGDC-GGALSCRLSGQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
G CATGDC G + C P T+ EF L + G D+Y ++V +GYN+ +
Sbjct: 205 GGFSCATGDCTSGKIKCLGIPIDPTTVVEFNLASYG--VDYYVVNVFNGYNLPL 256
>AT4G18250.1 | chr4:10087343-10091963 REVERSE LENGTH=854
Length = 853
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 24/141 (17%)
Query: 31 FTITNRCSFTVWPAATPVGGGTQLNP-------GQTWTINVPAGTSSGRVWGRTGCSFDG 83
TI N+C+ TVWP +Q++P G+ + P+ + G + RT CS D
Sbjct: 12 LTIENKCNHTVWPVIFSWNVDSQVSPTGFALRRGEARALQAPS-SWYGLISARTLCSIDS 70
Query: 84 AGRGRCATGDC-GGALSCRLS-GQPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM---- 137
G CATGDC G + C + G P+T F + + Y +SV GYN+ +
Sbjct: 71 TGTFSCATGDCESGTIECPGNYGWAPVTYVYFRMNS-------YTISVEYGYNLPLMVVP 123
Query: 138 ---SFSCSSGVTLTCRERSCP 155
S +C S + +++CP
Sbjct: 124 SQRSRTCISAGCVVELKKTCP 144
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 31 FTITNRCSFTVWPA-----ATPVGGGTQLNPGQTWTINVPAGTSSGRVWGRTGCSFDGAG 85
TI N+C+ T+WP + G L G+ IN P+ + G + RT CS D G
Sbjct: 223 ITIENKCNNTIWPVIFSWRSQVSTTGFTLKTGEERAINAPS-SWYGLISARTLCSNDSTG 281
Query: 86 RGRCATGDC-GGALSCRLSGQ-PPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAMSF---- 139
CATGDC G + C + + P+T F + G + Y +S+ GYN+ ++
Sbjct: 282 NFSCATGDCESGEIECPGTYKWSPVTYVIFRID--DGQINSYIISLEFGYNLPLTVVPSN 339
Query: 140 -SCSSGVTLTCRERSCPD 156
+C S + ++CP+
Sbjct: 340 PACISSGCMVDLNKTCPN 357
>AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209
Length = 208
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 98 LSCRLSG-QPPLTLAEFTLGTSGGNRDFYNLSVIDGYNVAM 137
+ C SG +PP TLAEFTLG SG + DFY++S++DGYN+ M
Sbjct: 1 MECNGSGAEPPATLAEFTLGISG-SLDFYDVSLVDGYNLPM 40
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,980,613
Number of extensions: 177004
Number of successful extensions: 503
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 442
Number of HSP's successfully gapped: 24
Length of query: 182
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 90
Effective length of database: 8,584,297
Effective search space: 772586730
Effective search space used: 772586730
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)