BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0629700 Os12g0629700|AK099946
(179 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245 115 1e-26
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 101 2e-22
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 88 2e-18
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 88 3e-18
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 87 5e-18
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 86 1e-17
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 83 1e-16
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 79 9e-16
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 79 1e-15
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 79 1e-15
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 76 9e-15
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 76 1e-14
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 75 2e-14
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 74 3e-14
AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257 73 7e-14
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 73 7e-14
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 72 1e-13
AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250 70 5e-13
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 69 2e-12
AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295 62 1e-10
AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209 49 1e-06
AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800 49 2e-06
>AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245
Length = 244
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 98/201 (48%), Gaps = 54/201 (26%)
Query: 31 FTITNRCSFTVWPAATPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXXXXXXXX 90
F I N+CS+TVW AA+P GGG +L GQ+W ++V AGT R+WGRT CNF
Sbjct: 25 FEILNQCSYTVWAAASP-GGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQ 83
Query: 91 XXXXXXXLSCSLSGRPPMTLAEFTLG--GSQDFYDLSVIDGYNVAMSFS----------- 137
L C+ G+PP TLAE+ L + DFYD+S++DG+N+ M FS
Sbjct: 84 TGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRILC 143
Query: 138 -------------------------------CSSGVGLTCRDS--------RCPDAYLFP 158
C++G G +C D+ RCPDAY +P
Sbjct: 144 TADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQG-SCSDTEYSRFFKQRCPDAYSYP 202
Query: 159 SDNSKTHACRGNSNYQVVFCP 179
D+ + N+NY+VVFCP
Sbjct: 203 QDDPTSTFTCTNTNYRVVFCP 223
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 31 FTITNRCSFTVWPAATP----VGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXXXX 86
FTI N C T+WPA TP GGG +L PGQ+ + P G S GR+WGRTGC F
Sbjct: 91 FTIINSCDQTIWPAITPGENFNGGGFELKPGQSIVFHAPVGWS-GRIWGRTGCKFDSTGT 149
Query: 87 XXXXXXXXXXXLSCSLSGRPPMTLAEFTLGGSQDFYDLSVIDGYNVAMSFSCSSGVG 143
L CS SG+PP +LAEFTL + DFYD+S++DG+N+ MS + +G G
Sbjct: 150 GTCETGSCGSTLKCSASGKPPASLAEFTLA-ALDFYDVSLVDGFNLPMSVTPMNGKG 205
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 31 FTITNRCSFTVWPAA------TPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXX 84
FT+ N C +TVWP T GG L+PG + + PAG S GR W RTGCNF
Sbjct: 27 FTLQNSCPYTVWPGILSGNDNTLGDGGFPLTPGASVQLTAPAGWS-GRFWARTGCNFDAS 85
Query: 85 XXXXXXXXXXXXXLSCSLSGRPPMTLAEFTL--GGSQDFYDLSVIDGYNVAMSFSCSSGV 142
L C+ G PP+TLAEFTL G +DFYD+S++DGYNV M G
Sbjct: 86 GHGNCGTGDCGGVLKCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVEMGIKPQGGS 145
Query: 143 G 143
G
Sbjct: 146 G 146
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 31 FTITNRCSFTVWP------AATPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXX 84
FT+ N C++TVWP + T GG L+PG + + P G S GR W RTGCNF
Sbjct: 26 FTLQNSCAYTVWPGTLSGNSITLGDGGFPLTPGASVQLTAPTGWS-GRFWARTGCNFDAS 84
Query: 85 XXXXXXXXXXXXXLSCSLSGRPPMTLAEFTLGGSQ---DFYDLSVIDGYNVAMSFSCSSG 141
L C+ G PP TLAEFT+G S DFYD+S++DGYNV M G
Sbjct: 85 GHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAGMDFYDVSLVDGYNVKMGIKPQGG 144
Query: 142 VGLTCRDSRC 151
G C+ + C
Sbjct: 145 FG-NCKYAGC 153
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 35 NRCSFTVWPAATP-------VGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXXXXX 87
N+C++TVWP P GGG +LSP + +T+ +P SGR WGR GC+F
Sbjct: 48 NKCTYTVWPGIQPSSGQSLLAGGGFKLSPNRAYTLQLPP-LWSGRFWGRHGCSFDRSGRG 106
Query: 88 XXXXXXXXXXLSCS-LSGRPPMTLAEFTLGGSQDFYDLSVIDGYNVAMSFSCSSGVG 143
C+ G PP TLAE TLG DFYD+S++DGYN+AMS G G
Sbjct: 107 RCATGDCGGSFLCNGAGGVPPATLAEITLGHDMDFYDVSLVDGYNLAMSIMPVKGTG 163
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
TI NRCSFTVWP G G +L PG + + PA + SGR W RTGCNF
Sbjct: 35 ITIVNRCSFTVWPGILSNSGSGDIGTTGFELVPGGSRSFQAPA-SWSGRFWARTGCNFNS 93
Query: 84 XXXXXXXXXXX--XXXLSCSLSG-RPPMTLAEFTLGG-------SQDFYDLSVIDGYNVA 133
+ C+ +G +PP TLAEFT+G QDFYD+S++DGYNV
Sbjct: 94 DTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDFYDVSLVDGYNVP 153
Query: 134 MSFSCSSGVGLTC--------RDSRCPDAYLFPSDNSKTHACR 168
M S G TC + +CP F S ++ AC
Sbjct: 154 MLVEASGGSEGTCLTTGCVTDLNQKCPTELRFGSGSACKSACE 196
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 31 FTITNRCSFTVWPAATPVG-------GGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
FT+ N C TVW A T G GG +L+PG + + PAG S GR W RTGCNF
Sbjct: 26 FTLRNNCPTTVW-AGTLAGQGPKLGDGGFELTPGASRQLTAPAGWS-GRFWARTGCNFDA 83
Query: 84 XXXXXXXXXXXXXXLSCSLSGRPPMTLAEFTL--GGSQDFYDLSVIDGYNVAMSFSCSSG 141
L C+ G PP+TLAEFTL G +DFYD+S++DGYNV + S G
Sbjct: 84 SGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGG 142
Query: 142 VG-------LTCRDSRCPDAYLFPSDNSKTHACR 168
G ++ ++ CPD L D + AC+
Sbjct: 143 SGDCKYAGCVSDLNAACPD-MLKVMDQNNVVACK 175
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 35 NRCSFTVWPAATP-------VGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXXXXX 87
N+C VWP P GGG +L + ++ +P SGR WGR GC F
Sbjct: 28 NKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPP-LWSGRFWGRHGCTFDRSGRG 86
Query: 88 XXXXXXXXXXLSCS-LSGRPPMTLAEFTLGGSQDFYDLSVIDGYNVAMSFSCSSGVG 143
LSC+ G PP TLAE TLG DFYD+S++DGYN+AMS G G
Sbjct: 87 HCATGDCGGSLSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSIMPVKGSG 143
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
FT NRC +TVWP G G +L G + ++ P G S GR W RTGC F
Sbjct: 32 FTFANRCGYTVWPGILSNAGSPTLSTTGFELPKGTSRSLQAPTGWS-GRFWARTGCKFDS 90
Query: 84 XXXXXXXXXX-XXXXLSCS-LSGRPPMTLAEFTLG-GSQDFYDLSVIDGYNVAMSFSCSS 140
+ C+ L PP+TLAEFTLG G DFYD+S++DGYN+ M +
Sbjct: 91 SGSGTCKTGDCGSNAVECAGLGAAPPVTLAEFTLGTGGDDFYDVSLVDGYNIPMIVEVAG 150
Query: 141 GVG-------LTCRDSRCPDAYLFPSDNSKTHAC 167
G G T + +CP F ++ AC
Sbjct: 151 GSGQCASTGCTTDLNIQCPAELRFGDGDACKSAC 184
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 31 FTITNRCSFTVWPA------ATPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXX 84
FT+TN C T+WP A GG L+ G + T V G S GR W RT CNF
Sbjct: 28 FTLTNHCGSTIWPGILTANGAQLGDGGFALASGSSVTFTVSPGWS-GRFWARTYCNFDAS 86
Query: 85 XXXXXXXXXXXXXLSCS-LSGRPPMTLAEFTLGGS------QDFYDLSVIDGYNVAMSFS 137
L C+ G PP TLAEFT+G S QDFYD+S++DGYNV M +
Sbjct: 87 GSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMKIT 146
Query: 138 CSSGVGLTCRDSRC 151
G G C+ + C
Sbjct: 147 PQGGSG-DCKTAGC 159
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGC--NF 81
FTI N+CS+TVWP G G L+P +T I +PA S GR+WGRT C +
Sbjct: 25 FTIVNQCSYTVWPGLLSGAGTSPLPTTGFSLNPTETRVIPIPAAWS-GRIWGRTLCTQDA 83
Query: 82 XXXXXXXXXXXXXXXXLSCSLSGR-PPMTLAEFTLGGSQ--DFYDLSVIDGYNVAMSF 136
+ CS SG PP TLAEFTL G+ DFYD+S++DGYN+ M+
Sbjct: 84 TTGRFTCITGDCGSSTVECSGSGAAPPATLAEFTLNGANGLDFYDVSLVDGYNIPMTI 141
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
F + N+C +TVWP G G L G+ TI+ P + GR WGRT C+
Sbjct: 25 FIMVNKCEYTVWPGLLSNAGVPPLPTTGFVLQKGEERTISAPT-SWGGRFWGRTQCSTDT 83
Query: 84 XXXXXXXXXX-XXXXLSCSLSGR-PPMTLAEFTLGGSQ--DFYDLSVIDGYNVAMSFSCS 139
L CS SG PP TLAEFTL GS DFYD+S++DGYNV M +
Sbjct: 84 DGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNGLDFYDVSLVDGYNVPMLVAPQ 143
Query: 140 SGVGLTCRDSRC 151
G GL C + C
Sbjct: 144 GGSGLNCSSTGC 155
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
FT +N+C +TVWP G G L G+T TIN P+ + GR WGRT C+
Sbjct: 22 FTFSNKCDYTVWPGILSNAGVSPLPTTGFVLLKGETRTINAPS-SWGGRFWGRTLCSTDS 80
Query: 84 XXXXXXXXXX-XXXXLSCSLSGR-PPMTLAEFTLGGS--QDFYDLSVIDGYNVAMSFSCS 139
+ CS +G PP TLAEFTL GS DFYD+S++DGYNV M
Sbjct: 81 DGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGGLDFYDVSLVDGYNVQMLVVPQ 140
Query: 140 SGVGLTCRDSRC 151
G G C + C
Sbjct: 141 GGSGQNCSSTGC 152
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Query: 31 FTITNRCSFTVWP-------AATPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
FTI N+C +TVWP A + G L G++ INVP + SGR+WGR+ C+
Sbjct: 27 FTIENKCDYTVWPGFLTMTTAVSLPTNGFSLKKGESRVINVPP-SWSGRLWGRSFCSTSS 85
Query: 84 XXXXXXXXXX-XXXXLSCSLSG-RPPMTLAEFTLGGS--QDFYDLSVIDGYNVAMSFSCS 139
+ CS SG RPP TL +FTL + QDFYD+SV+DGYN+ +
Sbjct: 86 TGNFSCATGDCGSGKIECSDSGARPPTTLIDFTLDATDGQDFYDVSVVDGYNLPLVVVPQ 145
Query: 140 S-GVGLTCRDSRC 151
G G TC + C
Sbjct: 146 RLGSGRTCSNVGC 158
>AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257
Length = 256
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 31 FTITNRCSFTVWPAATP-------VGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
F + N+CSF +WPA P GG L G I+ P G SGR+W RTGC+F
Sbjct: 30 FYVQNKCSFPIWPAVAPNSGHPVLASGGFYLPCGGIKRIDAPLGW-SGRIWARTGCDFTS 88
Query: 84 XXXXXXXXXXXXXXLSCS-LSGRPPMTLAEFTLGGSQ---DFYDLSVIDGYNVAMSFSCS 139
L C+ L G+PP TL + + + +FYD+S++DGYN+ + + S
Sbjct: 89 NSKQACETGDCDGHLECNGLIGKPPATLIQIAVQADKSKPNFYDVSLVDGYNLPVVVN-S 147
Query: 140 SGVGLTC------RDSR--CPDAYLFPSDNSKTHACR 168
V C +D + CP+ ++ + AC+
Sbjct: 148 KPVSSKCTILGCHKDLKTTCPEELQVLNEEGRVVACK 184
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
Query: 31 FTITNRCSFTVWPAATPVGG-------GTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
FTI N+C++TVWP G G L+ ++ I++PA S GR+WGRT CN
Sbjct: 25 FTIVNQCNYTVWPGLLSGAGTAPLPTTGFSLNSFESRLISIPAAWS-GRIWGRTLCNQNE 83
Query: 84 XXXXXXXXXXX--XXXLSCSLSGR-PPMTLAEFTLGGSQ--DFYDLSVIDGYNVAMSF 136
+ CS +G PP TLAEFTL G++ DFYD+S++DGYN+ M+
Sbjct: 84 ITGIFTCVTGDCGSSQIECSGAGAIPPATLAEFTLNGAENLDFYDVSLVDGYNIPMTI 141
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Query: 31 FTITNRCSFTVWPAATPVGGGTQLSPGQTWTINVPAGTS-------SGRVWGRTGCNFXX 83
F ITN C FT+WP T G GTQ P + ++V SGR+W RTGCNF
Sbjct: 27 FVITNNCPFTIWPG-TLAGSGTQPLPTTGFRLDVGQSVRIPTALGWSGRIWARTGCNFDA 85
Query: 84 XXXXXXXXXXXXXXLSCSLSG-RPPMTLAEFTLG---GSQDFYDLSVIDGYNVAM 134
L C+ +G PP +L E TLG +DFYD+S++DGYN+ +
Sbjct: 86 NGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDVSLVDGYNLPI 140
>AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250
Length = 249
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 31 FTITNRCSFTVWPAATPVGGGTQLSPG----QTWT---INVPAGTSSGRVWGRTGCNFXX 83
T+ N C FTVWPA P G L G T+T NVP SGR+W RT C
Sbjct: 29 LTVVNNCPFTVWPAIQPNAGHPVLEKGGFALPTFTHRSFNVPTTHWSGRIWARTWCAHYN 88
Query: 84 XXXXXXXXXXXXXXLSCSLSGRPPMTLAEFTL--GGSQDF--YDLSVIDGYNVAMSFSCS 139
L G PP +LA+F L GG DF Y +S++DGYNV M+ +
Sbjct: 89 GKFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFSSYGVSLVDGYNVPMTVTPH 148
Query: 140 SGVGLT----CRD---SRCPDAYLFPSDNSKTHACR 168
G G+ CR+ CP S + AC+
Sbjct: 149 EGHGVCPVVGCREDLIKTCPAHLQVRSHSGHVVACK 184
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 31 FTITNRCSFTVWP-------AATPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGC--NF 81
F ITNRC T+WP +A G +LS G++ T+ +P + SGR+W RT C +
Sbjct: 25 FKITNRCRNTIWPGLLSGANSAPLPTTGFRLSRGKSKTVAIPE-SWSGRLWARTLCSQDR 83
Query: 82 XXXXXXXXXXXXXXXXLSCSLSG-RPPMTLAEFTLGGS--QDFYDLSVIDGYNVAM 134
+ CS SG +PP TLAEFTL G+ DFYD+S++DGYN+ M
Sbjct: 84 SSGSFVCLTGDCGSGKVECSGSGAKPPATLAEFTLNGTGGLDFYDVSLVDGYNLPM 139
>AT5G02140.1 | chr5:423384-424437 FORWARD LENGTH=295
Length = 294
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 31 FTITNRCSFTVWPAA-------TPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXX 83
I N C ++WP TP GG + G+ I+VP SGR+WGR GC F
Sbjct: 23 LIIVNNCQESIWPGILGGGGQITPRNGGFHMGSGEETIIDVP-DKWSGRIWGRQGCTFNQ 81
Query: 84 XXXXX-XXXXXXXXXLSCS-LSGRPPMTLAEFTLGGSQ---DFYDLSVIDGYNVAMSFS 137
++C G PP T+ E TLG S FYD+S++DG+N+ +S
Sbjct: 82 NGKGSCQTGDCNDGSINCQGTGGVPPATVVEMTLGSSSSPLHFYDVSLVDGFNLPVSMK 140
>AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209
Length = 208
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 98 LSCSLSG-RPPMTLAEFTLG--GSQDFYDLSVIDGYNVAM 134
+ C+ SG PP TLAEFTLG GS DFYD+S++DGYN+ M
Sbjct: 1 MECNGSGAEPPATLAEFTLGISGSLDFYDVSLVDGYNLPM 40
>AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800
Length = 799
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 31 FTITNRCSFTVWPAA-----TPVGGGTQLSPGQTWTINVPAGTSSGRVWGRTGCNFXXXX 85
FTI N+C +T+WPA + G L G+T TI P+ + GR WGRT C+
Sbjct: 147 FTIENKCQYTIWPATYGYRRSLETTGFVLEKGETRTIKAPS-SWIGRFWGRTLCSTNSTG 205
Query: 86 XXX-XXXXXXXXXLSCSLSGRPPMTLAEFTLGG-SQDFYDLSVIDGYNVAMSFS-----C 138
+ C P T+ EF L D+Y ++V +GYN+ + + C
Sbjct: 206 GFSCATGDCTSGKIKCLGIPIDPTTVVEFNLASYGVDYYVVNVFNGYNLPLLVTPENKNC 265
Query: 139 SSGVGLTCRDSRCPDAYLFPSDNSKTH 165
S + + CP + S +H
Sbjct: 266 RSIECVIDMNETCPSELMVNSSGLGSH 292
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.135 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,320,547
Number of extensions: 117532
Number of successful extensions: 350
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 288
Number of HSP's successfully gapped: 22
Length of query: 179
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 87
Effective length of database: 8,584,297
Effective search space: 746833839
Effective search space used: 746833839
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 108 (46.2 bits)