BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0617800 Os12g0617800|AK068845
(791 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G04850.2 | chr4:2453174-2457490 FORWARD LENGTH=777 811 0.0
AT1G01790.1 | chr1:284781-290869 FORWARD LENGTH=1194 209 6e-54
AT4G00630.2 | chr4:261655-267789 REVERSE LENGTH=1186 149 6e-36
AT5G51710.1 | chr5:21004566-21008580 REVERSE LENGTH=569 78 2e-14
AT2G19600.1 | chr2:8479275-8483482 FORWARD LENGTH=593 68 3e-11
>AT4G04850.2 | chr4:2453174-2457490 FORWARD LENGTH=777
Length = 776
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/671 (63%), Positives = 486/671 (72%), Gaps = 28/671 (4%)
Query: 83 MDIASAVEVINDLGFDXXXXXXXXXXXXPAFRVVKASPILGFFCAGVVLNQFGLIRNLTD 142
+D+ASAV+VINDLGFD PAFR++KASPILGFF AGVVLNQFGLIRNLTD
Sbjct: 92 VDVASAVDVINDLGFDTLTFLMVTVIIVPAFRILKASPILGFFFAGVVLNQFGLIRNLTD 151
Query: 143 VKLLSEWGILFLLFEMGLELSLSRLKALARYAFGMGLPQVLLSTLAFTAFELPPNGAIGT 202
VK+LSEWGILFLLFEMGLELSL+RLKALA++AFGMGL QVLL T AFTAFELPPNGAIGT
Sbjct: 152 VKVLSEWGILFLLFEMGLELSLARLKALAKFAFGMGLTQVLLCTAAFTAFELPPNGAIGT 211
Query: 203 KILQFLFDSRPDLVNIRSVDEAIVIGXXXXXXXXXXXXXXXXEKGELPTRFGSATLGILL 262
KIL+FLF SRPDLVNIRS+DEA+VIG EKGELPTRFGSATLGILL
Sbjct: 212 KILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILL 271
Query: 263 LQDIAXXXXXXXXXXXESQNVVEQSVWPMXXXXXXXXXXXXXXXXXXXXXXIRRIFEFVA 322
LQDIA ESQ++ +S+WPM +RRIFE VA
Sbjct: 272 LQDIAVVPLLVILPVLESQDIGGESIWPMLAKESAKALGGLGILSLGGKFFLRRIFEVVA 331
Query: 323 ESRSSEAFVALCLLTVSGTSLLTQWLGFSDTLGAFLAGAILAETNFRTQIEADIRPXXXX 382
E+RSSEAFVALCLLTV+GTSL+TQWLGFSDTLGAFLAGA+LAETNFRTQIEADIRP
Sbjct: 332 ETRSSEAFVALCLLTVAGTSLVTQWLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGL 391
Query: 383 XXXXXXXXXXXSIDMELLIREWPNVLSXXXXXXXXXXXXXXXXXPRVGLTLQESVRIGLL 442
SIDME+L REWPNVLS PRVGLT+QESVR+G L
Sbjct: 392 LLGLFFVTTGTSIDMEVLFREWPNVLSLLGGLIVIKTLIITAIGPRVGLTIQESVRVGFL 451
Query: 443 LSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEIGRRAAGIIDEKSET 502
LSQGGEF FVVFSLANRLGVLP ELNKLLIIVVVLSMALTP LN++GR+AA +DE+ +
Sbjct: 452 LSQGGEFAFVVFSLANRLGVLPNELNKLLIIVVVLSMALTPYLNQLGRKAADFLDERLDP 511
Query: 503 KEKPAEMVNYDATEPIVILGFGEMGKVLAKFLSAPLSFGLDKDAEGWPYVAFDLNPAVVK 562
EK E VN+D +E IVI+GFG+MG+VLA FLS PL D D GWPY+ FDLNPAVVK
Sbjct: 512 GEKIGEDVNFDVSESIVIIGFGQMGQVLANFLSTPLV--SDSDLVGWPYIGFDLNPAVVK 569
Query: 563 SARKSGFPVLYGDGSRPLVLQSAGVSSPKAVMVMYTGKEKTIEAVNRLRQAFPGVPMYAR 622
+RK GFP+LYGDGSRP VLQSAGVSSPKA+M+MY GK++T EAV RLR AFPG P+YAR
Sbjct: 570 ESRKLGFPILYGDGSRPSVLQSAGVSSPKAIMIMYKGKKRTTEAVQRLRLAFPGSPIYAR 629
Query: 623 AQDMSHLLDLKKAGATEVVLENAETSLQLGSMLLRGLGVMSDDVSFFSKLVRDSMELQAQ 682
AQD+ HLL+LKKAGAT+ +LENAETSLQLGS LL G GVMSDDVSF SK+ RDSME+QAQ
Sbjct: 630 AQDLPHLLELKKAGATDAILENAETSLQLGSKLLTGFGVMSDDVSFLSKVFRDSMEIQAQ 689
Query: 683 EALNNIE----------------------NREIDIMKPLEIRISDLVERNGNGSRMIAQE 720
E + E +++ +MKP++++ SD N + + I QE
Sbjct: 690 EEITASETNAGLKPMQMKASDINVVSAATQKQVQLMKPMQMKASD---SNSDSAAEILQE 746
Query: 721 DSLRLSSRPNI 731
+ LS P I
Sbjct: 747 TA-GLSQPPEI 756
>AT1G01790.1 | chr1:284781-290869 FORWARD LENGTH=1194
Length = 1193
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 250/545 (45%), Gaps = 37/545 (6%)
Query: 111 PAF-RVVKASPILGFFCAGVVLNQFGL--IRNLTDVKLLSEWGILFLLFEMGLELSLSRL 167
P F ++ SP+LG+ AG+++ +GL IRN+ + ++E+G++FLLF +GLELS+ RL
Sbjct: 604 PLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTRAIAEFGVVFLLFNIGLELSVERL 663
Query: 168 KALARYAFGMGLPQVLLSTLAFTAFELPPNGAIGTKILQFLFDSRPDLVNIRSVDEAIVI 227
++ +Y FG+G QVL++ G G AIVI
Sbjct: 664 SSMKKYVFGLGSAQVLVTAAVVGLLAHYVAGQAGPA--------------------AIVI 703
Query: 228 GXXXXXXXXXXXXXXXXEKGELPTRFGSATLGILLLQDIAXXXXXXXXXXXESQN----V 283
G E+GE +R G A+ +LL QD+A + +
Sbjct: 704 GNGLALSSTAVVLQVLQERGESTSRHGRASFSVLLFQDLAVVVLLILIPLISPNSSKGGI 763
Query: 284 VEQSVWPMXXXXXXXXXXXXXXXXXXXXXXIRRIFEFVAESRSSEAFVALCLLTVSGTSL 343
Q++ +R I++ +AE+R++E F A LL + GTSL
Sbjct: 764 GFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENRNAEIFSANTLLVILGTSL 823
Query: 344 LTQWLGFSDTLGAFLAGAILAETNFRTQIEADIRPXXXXXXXXXXXXXXXSIDMELLIRE 403
LT G S LGAFLAG +LAET F Q+E+DI P SID +LL+
Sbjct: 824 LTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSN 883
Query: 404 WPNVLSXXXXXXXXXXXXXXXXXPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVL 463
+P ++ G+++ ++R+GLLL+ GGEF FV F A G++
Sbjct: 884 FPVIVGTLGLLIVGKTMLVVIMGKLFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIM 943
Query: 464 PLELNKLLIIVVVLSMALTPLLNEIGRRAAGIIDEKSETKEKPAEMVNYDATEPIVILGF 523
+L+ LL +VV +SMA+TP L G+ A + P E D I+I GF
Sbjct: 944 SPQLSSLLFLVVGISMAITPWLAAGGQLIASRFELHDVRSLLPVESETDDLQGHIIICGF 1003
Query: 524 GEMGKVLAKFLSAPLSFGLDKDAEGWPYVAFDLNPAVVKSARKSGFPVLYGDGSRPLVLQ 583
G +G+++A+ LS L P+VA D++ V R PV +GD VL
Sbjct: 1004 GRVGQIIAQLLSERL----------IPFVALDVSSDRVTIGRSLDLPVYFGDAGSKEVLH 1053
Query: 584 SAGVSSPKAVMVMYTGKEKTIEAVNRLRQAFPGVPMYARAQDMSHLLDLKKAGATEVVLE 643
G A +V V L + +P V + RA D+ H L+L+KAGAT VV E
Sbjct: 1054 KIGAGRACAAVVALDAPGANYRCVWALSKFYPNVKTFVRAHDVVHGLNLEKAGATAVVPE 1113
Query: 644 NAETS 648
E S
Sbjct: 1114 TLEPS 1118
>AT4G00630.2 | chr4:261655-267789 REVERSE LENGTH=1186
Length = 1185
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 166/335 (49%), Gaps = 10/335 (2%)
Query: 314 IRRIFEFVAESRSSEAFVALCLLTVSGTSLLTQWLGFSDTLGAFLAGAILAETNFRTQIE 373
+R I++ +AE+R++E F A LL + GTSLLT G S LGAFLAG +LAET F Q+E
Sbjct: 785 LRPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVE 844
Query: 374 ADIRPXXXXXXXXXXXXXXXSIDMELLIREWPNVLSXXXXXXXXXXXXXXXXXPRVGLTL 433
+DI P SID +LL+ +P ++ G+++
Sbjct: 845 SDIAPYRGLLLGLFFMTVGMSIDPKLLLANFPLIMGTLGLLLVGKTILVVIIGKLFGISI 904
Query: 434 QESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPLLNEIGRRAA 493
+VR+GLLL+ GGEF FV F A G++ +L+ LL +VV +SMALTP L G+ A
Sbjct: 905 ISAVRVGLLLAPGGEFAFVAFGEAVNQGIMTPQLSSLLFLVVGISMALTPWLAAGGQLIA 964
Query: 494 GIIDEKSETKEKPAEMVNYDATEPIVILGFGEMGKVLAKFLSAPLSFGLDKDAEGWPYVA 553
+ + P E D I+I GFG +G+++A+ LS L P+VA
Sbjct: 965 SRFELQDVRSLLPVESETDDLQGHIIICGFGRIGQIIAQLLSERL----------IPFVA 1014
Query: 554 FDLNPAVVKSARKSGFPVLYGDGSRPLVLQSAGVSSPKAVMVMYTGKEKTIEAVNRLRQA 613
D++ V R PV +GD VL G A + V L +
Sbjct: 1015 LDVSSDRVAIGRSLDLPVYFGDAGSREVLHKIGADRACAAAIALDTPGANYRCVWALSKY 1074
Query: 614 FPGVPMYARAQDMSHLLDLKKAGATEVVLENAETS 648
FP V + RA D+ H L+L+KAGAT VV E E S
Sbjct: 1075 FPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPS 1109
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 23/160 (14%)
Query: 111 PAF-RVVKASPILGFFCAGVVLNQFGL--IRNLTDVKLLSEWGILFLLFEMGLELSLSRL 167
P F ++ SP+LG+ AG+++ +GL IRN+ K ++E+G++FLLF +GLELS+ RL
Sbjct: 584 PLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKAIAEFGVVFLLFNIGLELSVERL 643
Query: 168 KALARYAFGMGLPQVLLSTLAFTAFELPPNGAIGTKILQFLFDSRPDLVNIRSVDEAIVI 227
++ +Y FG+G QVL++ G G AIVI
Sbjct: 644 SSMKKYVFGLGSAQVLVTAAVIGLITHYVAGQAGPA--------------------AIVI 683
Query: 228 GXXXXXXXXXXXXXXXXEKGELPTRFGSATLGILLLQDIA 267
G E+GE +R G AT +LL QD+A
Sbjct: 684 GNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLA 723
>AT5G51710.1 | chr5:21004566-21008580 REVERSE LENGTH=569
Length = 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 149/381 (39%), Gaps = 34/381 (8%)
Query: 113 FRVVKASPILGFFCAGVVLNQFGL--IRNLTDVKLLSEWGILFLLFEMGLELSLSRLKAL 170
F + I+G+ AG ++ GL I + V+ ++++G++FLLF +GLE S+++LK +
Sbjct: 172 FSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSMTKLKVV 231
Query: 171 ARYAFGMGLPQVLLSTLAFTAFELPPNGAIGTKILQFLFDSRPDLVNIRSVDEAIVIGXX 230
A GL Q++L L FL L R + E I +G
Sbjct: 232 GPVAVLGGLLQIVL--------------------LMFLCGVTALLCGAR-LSEGIFVGAF 270
Query: 231 XXXXXXXXXXXXXXEKGELPTRFGSATLGILLLQDIAXXXXXXXXXXXESQNVVEQSVWP 290
E+ + G T+GIL+ QD + + Q +
Sbjct: 271 LSMSSTAVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALLPVLGGNSGLLQGIIS 330
Query: 291 MXXXXXXXXXXXXXXXXXXXXXXIRRIFEFVAE--SRSSEAF----VALCLLTVSGTSLL 344
M + R + + + S+++E + VA CLL+ +
Sbjct: 331 MGKLLLILSIYLTVASLLTWSF-VPRFLKLMIQLSSQTNELYQLAAVAFCLLS----AWC 385
Query: 345 TQWLGFSDTLGAFLAGAILAETNFRTQIEADIRPXXXXXXXXXXXXXXXSIDMELLIREW 404
+ LG S LG+F+AG +L+ T F + P I++ L
Sbjct: 386 SDKLGLSLELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGMLINVHFLWNHV 445
Query: 405 PNVLSXXXXXXXXXXXXXXXXXPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLP 464
+L+ ++ S +G+LL+Q GEF FV+ S A+ L V+
Sbjct: 446 DILLASVILVIVIKTAIAAVVVKAFRYNMRISFHVGVLLAQIGEFAFVLLSRASNLHVIE 505
Query: 465 LELNKLLIIVVVLSMALTPLL 485
++ LL+ LS+ TPLL
Sbjct: 506 GKMYLLLLGTTALSLVTTPLL 526
>AT2G19600.1 | chr2:8479275-8483482 FORWARD LENGTH=593
Length = 592
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 138/383 (36%), Gaps = 36/383 (9%)
Query: 112 AFRVVKASPILGFFCAGVVLNQFGL--IRNLTDVKLLSEWGILFLLFEMGLELSLSRLKA 169
AF I G+ AG ++ GL + + V+ ++++G++FLLF +GLE S ++L+
Sbjct: 186 AFACAGQPVITGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSAAKLRV 245
Query: 170 LARYAFGMGLPQVLLSTLAFTAFELPPNGAIGTKILQFLFDSRPDLVNIRSVDEAIVIGX 229
+ A GL Q+ L F G K+ E I +G
Sbjct: 246 VRAVAIPGGLLQIFL----FMCLSGITASLCGGKL-----------------TEGIFVGA 284
Query: 230 XXXXXXXXXXXXXXXEKGELPTRFGSATLGILLLQDIAXXXXXXXXXXXESQNVVEQSVW 289
E+ + G T+G L+LQD A + V Q V
Sbjct: 285 FLSMSSTAVVLKFLMERNSISALHGQITVGTLILQDCAVGLLFALLPVLGGTSGVLQGVL 344
Query: 290 PMXXXXXXXXXXXXXXXXXXXXXXIRRIFEFVAESRSSE-------AFVALCLLTVSGTS 342
M F + S SS+ A VA CLL +
Sbjct: 345 SMAKSLAILIAFLGALFVLSRTWV--PWFLKLMTSLSSQTNELYQLAAVAFCLLV----A 398
Query: 343 LLTQWLGFSDTLGAFLAGAILAETNFRTQIEADIRPXXXXXXXXXXXXXXXSIDMELLIR 402
+ LG S LG+F AG +++ T+ + P I M L
Sbjct: 399 WCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQVEPIRNFFAALFLASIGMLIHMHFLWN 458
Query: 403 EWPNVLSXXXXXXXXXXXXXXXXXPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGV 462
+L+ G + +V +G+ L+Q GEF FV+ S A+ L +
Sbjct: 459 HVDILLAAVLLVIVIKTVVVAIVVKVFGYNNKTAVLVGMSLAQIGEFAFVLLSRASNLHL 518
Query: 463 LPLELNKLLIIVVVLSMALTPLL 485
+ +L LL+ LS+ TPLL
Sbjct: 519 IESKLYLLLLGTTALSLVTTPLL 541
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,162,411
Number of extensions: 434402
Number of successful extensions: 1127
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1113
Number of HSP's successfully gapped: 8
Length of query: 791
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 685
Effective length of database: 8,200,473
Effective search space: 5617324005
Effective search space used: 5617324005
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)