BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0617100 Os12g0617100|AK101044
(607 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38640.1 | chr5:15468020-15470674 REVERSE LENGTH=643 607 e-174
AT1G48970.1 | chr1:18113868-18117547 REVERSE LENGTH=667 535 e-152
AT2G44070.1 | chr2:18231097-18232469 REVERSE LENGTH=334 496 e-140
AT3G07300.3 | chr3:2324967-2327380 REVERSE LENGTH=410 84 2e-16
AT1G72340.1 | chr1:27236898-27238482 FORWARD LENGTH=383 70 3e-12
AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581 69 8e-12
AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581 69 8e-12
AT2G05830.1 | chr2:2229759-2231839 FORWARD LENGTH=375 52 1e-06
>AT5G38640.1 | chr5:15468020-15470674 REVERSE LENGTH=643
Length = 642
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 286/380 (75%), Positives = 328/380 (86%)
Query: 228 MQFDNVHRVEKTKKHSLVNQAEAQNRVELFRHLPQYVHGTQLPDLESKFFHLDLMHPSVY 287
MQ+D+ RV K K+ ++V Q EA+NRVELFRHLPQY HGTQLPDLE+KFF LD MHP+VY
Sbjct: 263 MQYDDESRVVKAKRRAVVKQTEAKNRVELFRHLPQYEHGTQLPDLETKFFQLDPMHPAVY 322
Query: 288 KVGLQFLSGVISGGNACCVAMLLAFREAIKDYSTPSTKTLNRDLTAKISSYVSFLIECKP 347
KVGLQ+LSG ISGGNA C+AML AF+E +KDYSTP K+LNRD+TAKISSYVSFLIEC+P
Sbjct: 323 KVGLQYLSGDISGGNARCIAMLQAFQEVVKDYSTPPEKSLNRDMTAKISSYVSFLIECRP 382
Query: 348 LSISMGNAIRFLKNRIAKLLLTLSESEAKASLQSDIDRFINEKIIIADHVIVSHAIAKVR 407
LSISMGNAIRF+KNRIAKL +TLSESEAKA+LQSDI+RFINEKII+AD VIV HA+ K+R
Sbjct: 383 LSISMGNAIRFVKNRIAKLPITLSESEAKATLQSDIERFINEKIIVADTVIVKHAVTKIR 442
Query: 408 DDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYTHI 467
D DVLLTY S + VEM+ HA+EL KKFRV+VVDSRP EGQ LL RL+ +GI+CTYTHI
Sbjct: 443 DGDVLLTYGSPTAVEMVILHAHELRKKFRVLVVDSRPKLEGQLLLRRLIKRGINCTYTHI 502
Query: 468 NAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHERVQ 527
NAISYIMHEVT+VFLGASS+LSNG VYS VGTA VAMVA+AF VPVLVCCEAYK HERVQ
Sbjct: 503 NAISYIMHEVTKVFLGASSVLSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHERVQ 562
Query: 528 LDSICSNELGDPDVISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVSMIITEYGM 587
LDSICSNELGDP+ IS V RED+ +L T N NLQ LNL YD PSDY+SMIIT+YGM
Sbjct: 563 LDSICSNELGDPNAISEVHGREDINYLDGLTNNANLQFLNLMYDATPSDYISMIITDYGM 622
Query: 588 LPPTSVPVIVREYRREHIWI 607
+PPTSVPVIVREY++EH+ +
Sbjct: 623 VPPTSVPVIVREYQKEHLLV 642
>AT1G48970.1 | chr1:18113868-18117547 REVERSE LENGTH=667
Length = 666
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 254/381 (66%), Positives = 308/381 (80%), Gaps = 1/381 (0%)
Query: 228 MQFDNVHRVEKTKKHSLVNQAEAQNRVELFRHLPQYVHGTQLPDLESKFFHLDLMHPSVY 287
MQ+D+ RV+K K+ ++V Q E++N+VELF HLPQY QLP+L S FF LD +H +VY
Sbjct: 286 MQYDDKSRVDKAKRRAVVEQTESKNKVELFLHLPQYERSNQLPNLSSNFFTLDSIHHAVY 345
Query: 288 KVGLQFLSGVISGGNACCVAMLLAFREAIKDYSTPSTKTLNRDLTAKISSYVSFLIECKP 347
KVGLQ L+G ISG NA C+AML AF+EAI+DYSTP K L DLTAKI+ YVSFLIEC+P
Sbjct: 346 KVGLQHLAGDISGDNARCIAMLQAFQEAIEDYSTPPMKDLTMDLTAKINGYVSFLIECRP 405
Query: 348 LSISMGNAIRFLKNRIAKLLLTLSESEAKASLQSDIDRFINEKIIIADHVIVSHAIAKVR 407
LS+SMGNAIRFLKN+I KL + LSESEAK+SL SDI RFI+EK IIAD IV HA+ K+R
Sbjct: 406 LSMSMGNAIRFLKNQIRKLPVNLSESEAKSSLCSDIGRFIDEKTIIADKAIVQHAVTKIR 465
Query: 408 DDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYTHI 467
D +VLLTY S VVEMI +A+E+GKKFRVV+VDSRPN EGQ LL RLV +G+ CTYTHI
Sbjct: 466 DGEVLLTYGFSCVVEMILLYAHEIGKKFRVVIVDSRPNLEGQKLLRRLVTRGLDCTYTHI 525
Query: 468 NAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHERVQ 527
NAISYIM E TRVFLGASSI SNG +Y+ VGT+ +AMVA+AF VPV+VCCEAYK HERV
Sbjct: 526 NAISYIMREATRVFLGASSIYSNGTLYARVGTSCIAMVANAFSVPVIVCCEAYKFHERVL 585
Query: 528 LDSICSNELGDPDVISRVPE-REDLCHLKNCTYNENLQLLNLKYDTMPSDYVSMIITEYG 586
LDSICSNELGDPD ++ +P R + H K N+NLQ LNL YD+ PS+Y+SMI+++YG
Sbjct: 586 LDSICSNELGDPDAVANIPSFRTNAKHSKTMDNNKNLQFLNLMYDSTPSEYISMIVSDYG 645
Query: 587 MLPPTSVPVIVREYRREHIWI 607
M+PPTS+PVIVREYRRE++ +
Sbjct: 646 MIPPTSIPVIVREYRRENLLL 666
>AT2G44070.1 | chr2:18231097-18232469 REVERSE LENGTH=334
Length = 333
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/325 (73%), Positives = 277/325 (85%), Gaps = 1/325 (0%)
Query: 282 MHPSVYKVGLQFLSGVISGGNACCVAMLLAFREAIKDYSTPSTKTLNRDLTAKISSYVSF 341
MH +VYKVGL +LS ISGGNA C+AML AF+E +KDYSTP TLNRD+TA+ISSYVSF
Sbjct: 1 MHSAVYKVGLHYLSWDISGGNARCIAMLQAFQEVVKDYSTPPENTLNRDMTAQISSYVSF 60
Query: 342 LIECKPLSISMGNAIRFLKNRIAKLLLTLSESEAKASLQSDIDRFINEKIIIADHVIVSH 401
LIEC+PLSISMGNAIRF+KNRIAKL +TLSESEAKASL SDI+RFINEKII AD VIV H
Sbjct: 61 LIECRPLSISMGNAIRFVKNRIAKLPITLSESEAKASLHSDIERFINEKIIGADTVIVEH 120
Query: 402 AIAKVRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGIS 461
A+ K+RD DVLLTY SS+V+EMI HA+ELGKKFRV VVDSRP +G+ LL RL+ +GI+
Sbjct: 121 AVTKIRDGDVLLTYGSSTVIEMILVHAHELGKKFRVFVVDSRPKLQGKLLLRRLIKRGIN 180
Query: 462 CTYTHINAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYK 521
CTYTHI AISYIMH+VT+VFLGASS+ SNG VYS VGTA VAMVA+AF VPVLVCCEAYK
Sbjct: 181 CTYTHITAISYIMHQVTKVFLGASSVFSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYK 240
Query: 522 LHERVQLD-SICSNELGDPDVISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVSM 580
HE+VQLD SICSNELGDP+ IS+V RED+ +L T N L+ LNL YD PSDY+SM
Sbjct: 241 FHEKVQLDYSICSNELGDPNAISKVHGREDINYLNGLTNNAKLKFLNLMYDATPSDYISM 300
Query: 581 IITEYGMLPPTSVPVIVREYRREHI 605
IIT+YGM+PPTSVPVIVREY++EH+
Sbjct: 301 IITDYGMVPPTSVPVIVREYQKEHL 325
>AT3G07300.3 | chr3:2324967-2327380 REVERSE LENGTH=410
Length = 409
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 379 LQSDIDRFINEKI--IIADH-VIVSHAIAKVRDDDVLLTYASSSVVEMIFDHANELGKKF 435
L+ D+ +N+ I I H I AI + ++V+LT SS V A E + F
Sbjct: 178 LKHDVIEGVNQLIQEIAGCHEQIAEQAIEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSF 237
Query: 436 RVVVVDSRPNNEGQALLHRLVAKGISCTYTHINAISYIMHEVTRVFLGASSILSNGAVYS 495
RV V + P +G L LVA+G+ T +A+ ++ V V +GA ++++NG V
Sbjct: 238 RVFVAEGAPRYQGHLLAKELVARGLQTTVITDSAVFAMISRVNMVIIGAHAVMANGGVIG 297
Query: 496 SVGTAAVAMVAHAFGVPVLVCCEAYKLHERVQLD-SICSNELGDPDVISRVPEREDLCHL 554
VG A+ A VP +V ++KL + + NEL P + E D C L
Sbjct: 298 PVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSD-C-L 355
Query: 555 KNCTYNENLQLLNLKYDTMPSDYVSMIITEYGMLPPTSVPVIVREY 600
+ +LQ++N +D +P + VS+ IT+ G P+ + ++ +Y
Sbjct: 356 DFGAGSGSLQVVNPTFDYVPPNLVSLFITDTGGHNPSYMYRLIADY 401
>AT1G72340.1 | chr1:27236898-27238482 FORWARD LENGTH=383
Length = 382
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 25/194 (12%)
Query: 406 VRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYT 465
+ D +L + S VV I A + K FRV+ + RP+ G L L I
Sbjct: 199 IFDGCTILVHGLSRVVLEILKTAAQNNKLFRVLCTEGRPDGTGVLLSSELSKLDIPVKLL 258
Query: 466 HINAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHER 525
+A++Y M EV VF+GA ++ +G + + +GT +A+VAH+ PV V E+YK
Sbjct: 259 LDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARL 318
Query: 526 VQLD------SICSNELGDPDVISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVS 579
LD ++ E G ++P + +++ D P Y++
Sbjct: 319 YPLDQKDMAPALRPIEFG-----VKIPTK--------------VEVERSARDYTPPQYLT 359
Query: 580 MIITEYGMLPPTSV 593
++ T+ G+L P+ V
Sbjct: 360 LLFTDLGVLSPSVV 373
>AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581
Length = 580
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 406 VRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYT 465
+ D +L + S VV I + + K FRV+ + RP+ G L + L I
Sbjct: 397 IFDGCTILVHGFSRVVFEILKTSAQNKKLFRVLCTEGRPDKTGVLLANELAKLDIPVKLL 456
Query: 466 HINAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHER 525
+A++Y M EV VF+GA ++ +G + + +GT +A+VA + PV V E+YK
Sbjct: 457 IDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAQSMNKPVYVAAESYKFARL 516
Query: 526 VQLDSICSNELGDP-DVISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVSMIITE 584
LD P D VP + +++ D P Y++++ T+
Sbjct: 517 YPLDQKDLEPALRPIDFSVPVPPK--------------VEVERSARDYTPPQYLTLLFTD 562
Query: 585 YGMLPPTSV 593
G+L P+ V
Sbjct: 563 LGVLTPSVV 571
>AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581
Length = 580
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 406 VRDDDVLLTYASSSVVEMIFDHANELGKKFRVVVVDSRPNNEGQALLHRLVAKGISCTYT 465
+ D +L + S VV I + + K FRV+ + RP+ G L + L I
Sbjct: 397 IFDGCTILVHGFSRVVFEILKTSAQNKKLFRVLCTEGRPDKTGVLLANELAKLDIPVKLL 456
Query: 466 HINAISYIMHEVTRVFLGASSILSNGAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHER 525
+A++Y M EV VF+GA ++ +G + + +GT +A+VA + PV V E+YK
Sbjct: 457 IDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAQSMNKPVYVAAESYKFARL 516
Query: 526 VQLDSICSNELGDP-DVISRVPEREDLCHLKNCTYNENLQLLNLKYDTMPSDYVSMIITE 584
LD P D VP + +++ D P Y++++ T+
Sbjct: 517 YPLDQKDLEPALRPIDFSVPVPPK--------------VEVERSARDYTPPQYLTLLFTD 562
Query: 585 YGMLPPTSV 593
G+L P+ V
Sbjct: 563 LGVLTPSVV 571
>AT2G05830.1 | chr2:2229759-2231839 FORWARD LENGTH=375
Length = 374
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 330 DLTAKISSYVSFLIECKPLSISMGNAIRFLKNRIAKLLLTLSESEA--KASLQSDIDRFI 387
D A + + + +L+ +P ++++ +A LK+ IAK L T +E+++ KA +++ D
Sbjct: 81 DAVAFLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDML- 139
Query: 388 NEKIIIADHVIVSHAIAKVR------DDDVLLTYASSSVVEM--------IFDHANELGK 433
E ++++ I + ++ +R D +LT+ ++ + + + G
Sbjct: 140 -EDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALHTQGI 198
Query: 434 KFRVVVVDSRPNNEGQALL-HRLVAKGISCTYTHINAISYIMHE--VTRVFLGASSILSN 490
R ++RP N+G L LV + I T +A + +M + V V +GA + SN
Sbjct: 199 LERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDGRVDGVIVGADRVASN 258
Query: 491 GAVYSSVGTAAVAMVAHAFGVPVLVCCEAYKLHERVQLDSICSNELGDPDVISRVPERED 550
G + +GT ++A+ A G+P V + + L S G VI +E
Sbjct: 259 GDTANKIGTYSLALCAKHHGIPFYVAAPLTSVD--LSLSS------GKEIVIEERSPKE- 309
Query: 551 LCH----LKNCTYNENLQLLNLKYDTMPSDYVSMIITEYGML 588
L H L + + N +D P++ ++ IITE G++
Sbjct: 310 LMHTHGGLGERIAAPGISVWNPAFDMTPAELIAGIITEKGVI 351
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,300,789
Number of extensions: 419443
Number of successful extensions: 1255
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1254
Number of HSP's successfully gapped: 8
Length of query: 607
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 503
Effective length of database: 8,255,305
Effective search space: 4152418415
Effective search space used: 4152418415
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)