BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0605800 Os12g0605800|AK121511
(737 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03090.2 | chr1:739715-743819 FORWARD LENGTH=735 914 0.0
AT5G35360.3 | chr5:13584300-13588163 FORWARD LENGTH=556 435 e-122
AT1G36160.1 | chr1:13534196-13543773 FORWARD LENGTH=2255 213 3e-55
AT1G36180.1 | chr1:13546047-13558339 FORWARD LENGTH=2356 210 3e-54
AT1G29900.1 | chr1:10468164-10471976 FORWARD LENGTH=1188 60 6e-09
>AT1G03090.2 | chr1:739715-743819 FORWARD LENGTH=735
Length = 734
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/697 (63%), Positives = 540/697 (77%), Gaps = 4/697 (0%)
Query: 39 VEKVLVANRGEIACRVMRTARRLGIPTVAVYSDADRGALHVRAADEAVRLGPPPARESYL 98
+EK+LVANRGEIACR+MRTA+RLGI TVAVYSDADR +LHV++ADEAVR+GPP AR SYL
Sbjct: 38 IEKILVANRGEIACRIMRTAKRLGIQTVAVYSDADRDSLHVKSADEAVRIGPPSARLSYL 97
Query: 99 NASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGPPPSAIRDMGDKSASKR 158
+ I++AA RTGA+AIHPGYGFLSES+DFAQLC+ GLTFIGPP SAIRDMGDKSASKR
Sbjct: 98 SGVTIMEAAARTGAQAIHPGYGFLSESSDFAQLCEDSGLTFIGPPASAIRDMGDKSASKR 157
Query: 159 IMGAAGVPLVPGYHGAEQDIELLKLEANKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSV 218
IMGAAGVPLVPGYHG EQDI+ +K EA KIGYP++IKPTHGGGGKGMRIVQ +DF DS
Sbjct: 158 IMGAAGVPLVPGYHGHEQDIDHMKSEAEKIGYPIIIKPTHGGGGKGMRIVQSGKDFADSF 217
Query: 219 LSAQREAAASFGINTLLVEKYITQPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEE 278
L AQREAAASFG+NT+L+EKYIT+PRHIEVQIFGD+HGNV+HLYERDCS+QRRHQKIIEE
Sbjct: 218 LGAQREAAASFGVNTILLEKYITRPRHIEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEE 277
Query: 279 APAPNVTAQFRSHIGEAAVSAAKAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVT 338
APAPN++ +FR+++G+AAVSAA+AVGYY+AGTVEFIVDT S +FYFMEMNTRLQVEHPVT
Sbjct: 278 APAPNISEKFRANLGQAAVSAARAVGYYNAGTVEFIVDTESDQFYFMEMNTRLQVEHPVT 337
Query: 339 EMIVGQDLVEWQIRIANGECLPLSQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRP 398
EMIVGQDLVEWQIR+ANGE LPLSQ +VP++GHAFEARIYAENVP+GFLPATG L+HYRP
Sbjct: 338 EMIVGQDLVEWQIRVANGEPLPLSQSEVPMSGHAFEARIYAENVPKGFLPATGVLNHYRP 397
Query: 399 VPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNFQIAGLPTNV 458
V + +VRVETGVE+GDTVSMHYDPMIAKLVVWG +R ALVKLK+ LSNFQ+AG+PTN+
Sbjct: 398 VAVSPSVRVETGVEQGDTVSMHYDPMIAKLVVWGGNRGEALVKLKDCLSNFQVAGVPTNI 457
Query: 459 GFLQELAGHSAFEKGLVDTHFIERYQNDLLSTSTQ--ALSGSHEXXXXXXXXXXXXXXXX 516
FLQ+LA H F G V+THFIE +++DL + + A +++
Sbjct: 458 NFLQKLASHKEFAVGNVETHFIEHHKSDLFADESNPAATEVAYKAVKHSAALVAACISTI 517
Query: 517 DHVSSEVSLHDKKLSMWYAHPPFRMHHFAKRLMEFELDREXXXXXXXXXXXXVTYRSDGT 576
+H + S H K S+WY++PPFR+HH AK+ +E E + E V Y+ DG+
Sbjct: 518 EHSTWNESNHGKVPSIWYSNPPFRVHHEAKQTIELEWNNECEGTGSNLISLGVRYQPDGS 577
Query: 577 YFVETEDGSSPGLDVKVDSRGDHDFRVDVGGLQTDVTLAFYSKDNCNXXXXXXXXXXXXY 636
Y +E E SP L+++V G DFRV+ GL +V+LA Y KD +
Sbjct: 578 YLIE-EGNDSPSLELRVTRAGKCDFRVEAAGLSMNVSLAAYLKDGYKHIHIWHGSEHHQF 636
Query: 637 RQTLRXX-XXXXXXXXXXXXXXARSHPKGSVLAPMAGLVVKVLLKDGARVEEGQPVMVME 695
+Q + SHP G+++APMAGLVVKVL+++ A+V++GQP++V+E
Sbjct: 637 KQKVGIEFSEDEEGVQHRTSSETSSHPPGTIVAPMAGLVVKVLVENEAKVDQGQPILVLE 696
Query: 696 AMKMEHVVKAPCAGYVEGLKATAGQQVFDSSVLFTVK 732
AMKMEHVVKAP +G ++ LK AGQQV D S LF +K
Sbjct: 697 AMKMEHVVKAPSSGSIQDLKVKAGQQVSDGSALFRIK 733
>AT5G35360.3 | chr5:13584300-13588163 FORWARD LENGTH=556
Length = 555
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/448 (48%), Positives = 303/448 (67%), Gaps = 2/448 (0%)
Query: 40 EKVLVANRGEIACRVMRTARRLGIPTVAVYSDADRGALHVRAADEAVRLGPPPARESYLN 99
+K+LVANRGEIA RV+RTA +GIP VAVYS D+ ALHV+ ADEAV +G P+ +SYL
Sbjct: 75 DKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSNQSYLV 134
Query: 100 ASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGPPPSAIRDMGDKSASKRI 159
++ AA+ G +HPGYGFLSE+A F ++C+ G+ FIGP P +IR MGDK+ ++
Sbjct: 135 IPNVLSAAISRGCTMLHPGYGFLSENALFVEMCRDHGINFIGPNPDSIRVMGDKATARET 194
Query: 160 MGAAGVPLVPGYHGAEQDIELLKLEANKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVL 219
M AGVP VPG G Q E AN+IG+PV+IK T GGGG+GMR+ + P +FV +
Sbjct: 195 MKNAGVPTVPGSDGLLQSTEEAVRVANEIGFPVMIKATAGGGGRGMRLAKEPGEFVKLLQ 254
Query: 220 SAQREAAASFGINTLLVEKYITQPRHIEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEA 279
A+ EAAA+FG + +EK++ PRHIE Q+ D+ GNV+H ERDCS+QRR+QK++EEA
Sbjct: 255 QAKSEAAAAFGNDGCYLEKFVQNPRHIEFQVLADKFGNVVHFGERDCSIQRRNQKLLEEA 314
Query: 280 PAPNVTAQFRSHIGEAAVSAAKAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTE 339
P+P +TA+ R +G+AAV+AA ++GY GTVEF++D G FYFMEMNTR+QVEHPVTE
Sbjct: 315 PSPALTAELRKAMGDAAVAAAASIGYIGVGTVEFLLDE-RGSFYFMEMNTRIQVEHPVTE 373
Query: 340 MIVGQDLVEWQIRIANGECLPLSQEQVPLNGHAFEARIYAENVPRGFLPATGTLHHYRPV 399
MI DL+E QIR+A GE L QE + L GH+ E RI AE+ +GF P G + Y P
Sbjct: 374 MIYSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDPFKGFRPGPGRITSYLP- 432
Query: 400 PSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNFQIAGLPTNVG 459
VR+++ V V YD ++ KL+VW +R A+ ++K +L++ I G+PT +
Sbjct: 433 SGGPFVRMDSHVYSDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALNDTIITGVPTTIN 492
Query: 460 FLQELAGHSAFEKGLVDTHFIERYQNDL 487
+ + + F+ G VDT FI +++ +L
Sbjct: 493 YHKLILDVEDFKNGKVDTAFIVKHEEEL 520
>AT1G36160.1 | chr1:13534196-13543773 FORWARD LENGTH=2255
Length = 2254
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 226/509 (44%), Gaps = 72/509 (14%)
Query: 39 VEKVLVANRGEIACRVMRTARRLGIPT-----------VAVYSDADRGALHVRAADEAVR 87
+ +L+AN G A + +R+ R T +A D A H+R AD+ V
Sbjct: 37 IHSILIANNGMAAVKFIRSVRTWAYETFGTEKAILLVGMATPEDMRINAEHIRIADQFVE 96
Query: 88 LGPPPARESYLNASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGPPPSAI 147
+ +Y N IV+ A T A+ PG+G SE+ + A+G+ F+GPP S++
Sbjct: 97 VPGGTNNNNYANVQLIVEMAEVTRVDAVWPGWGHASENPELPDALDAKGIIFLGPPASSM 156
Query: 148 RDMGDKSASKRIMGAAGVPLVPGYHGAEQDI----------------------ELLKLEA 185
+GDK S I AA VP +P + G+ I E
Sbjct: 157 AALGDKIGSSLIAQAADVPTLP-WSGSHVKIPPNSNLVTIPEEIYRQACVYTTEEAIASC 215
Query: 186 NKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYITQPRH 245
+GYP +IK + GGGGKG+R V ++ Q E S + + K +Q RH
Sbjct: 216 QVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRH 271
Query: 246 IEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAPAPNVTAQFRSHIGEAAVSAAKAVGY 305
+EVQ+ D+HGNV L+ RDCS+QRRHQKIIEE P + + +AA AK+V Y
Sbjct: 272 LEVQLLCDKHGNVSALHSRDCSVQRRHQKIIEEGPITVAPPETVKKLEQAARRLAKSVNY 331
Query: 306 YSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMI-----------VGQDLVEWQI--- 351
A TVE++ +GE+YF+E+N RLQVEHPVTE I VG + WQI
Sbjct: 332 VGAATVEYLYSMDTGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEI 391
Query: 352 ---------------RIANGECLPL---SQEQVPLNGHAFEARIYAENVPRGFLPATGTL 393
R + P + + GH R+ +E+ GF P +G +
Sbjct: 392 RRFYGIEHGGGYDSWRKTSVVAFPFDFDKAQSIRPKGHCVAVRVTSEDPDDGFKPTSGRV 451
Query: 394 HHYRPVPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNFQIAG 453
S V V+ G + D + +GESR A+ + L QI G
Sbjct: 452 QEL-SFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRG 510
Query: 454 -LPTNVGFLQELAGHSAFEKGLVDTHFIE 481
+ TNV + +L S + + T +++
Sbjct: 511 EIRTNVDYTIDLLHASDYRDNKIHTGWLD 539
>AT1G36180.1 | chr1:13546047-13558339 FORWARD LENGTH=2356
Length = 2355
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 232/513 (45%), Gaps = 80/513 (15%)
Query: 39 VEKVLVANRGEIACRVMRTARRLGIPT-----------VAVYSDADRGALHVRAADEAVR 87
+ +LVA G A + +R+ R T +A D A H+R AD+ V
Sbjct: 139 IHSILVATNGMAAVKFIRSVRTWAYETFGSEKAVKLVAMATPEDMRINAEHIRIADQFVE 198
Query: 88 LGPPPARESYLNASAIVDAALRTGAKAIHPGYGFLSESADFAQLCKAEGLTFIGPPPSAI 147
+ +Y N IV+ A T A+ PG+G SE+ + K +G+ F+GPP ++
Sbjct: 199 VPGGTNNNNYANVQLIVEMAEVTRVDAVWPGWGHASENPELPDALKEKGIIFLGPPADSM 258
Query: 148 RDMGDKSASKRIMGAAGVPLVPGYHGAEQDI-----------ELLK-----------LEA 185
+GDK S I AA VP +P + G+ I E+ K
Sbjct: 259 IALGDKIGSSLIAQAADVPTLP-WSGSHVKIPPGRSLVTVPEEIYKKACVYTTEEAIASC 317
Query: 186 NKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYITQPRH 245
+GYP +IK + GGGGKG+R V ++ Q E S + + K +Q RH
Sbjct: 318 QVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGS----PIFIMKVASQSRH 373
Query: 246 IEVQIFGDQHGNVIHLYERDCSLQRRHQKIIEEAPAPNVTAQFRSHIGEAAVSAAKAVGY 305
+E Q+ DQ+GNV L+ RDCS+QRRHQKIIEE P + + +AA AK+V Y
Sbjct: 374 LEAQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPQETIKKLEQAARRLAKSVNY 433
Query: 306 YSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLPLSQ-- 363
A TVE++ +GE+YF+E+N RLQVEHPVTE I +L Q+ + G +PL Q
Sbjct: 434 VGAATVEYLYSMDTGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMG--IPLWQIP 491
Query: 364 --------------------------------EQVPLNGHAFEARIYAENVPRGFLPATG 391
E + GH R+ +E+ GF P +G
Sbjct: 492 EIRRFYGMEHGGGYDSWRKTSVVASPFDFDEAESLRPKGHCVAVRVTSEDPDDGFKPTSG 551
Query: 392 TLHH--YRPVPSTATVRVETGVEEGDTVSMHYDPMIAKLVVWGESRNAALVKLKNSLSNF 449
+ ++ P+ + V+ G + D + +GESR+ A+ + +L
Sbjct: 552 EIQELSFKSKPNMWSY---FSVKSGGGIHEFSDSQFGHVFAFGESRSVAIANMVLALKEI 608
Query: 450 QIAG-LPTNVGFLQELAGHSAFEKGLVDTHFIE 481
QI G + TNV + +L S + + + T +++
Sbjct: 609 QIRGDIRTNVDYTIDLLHASDYRENKIHTGWLD 641
>AT1G29900.1 | chr1:10468164-10471976 FORWARD LENGTH=1188
Length = 1187
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 136 GLTFIGPPPSAIRDMGDKSASKRIMGAAGVPLVPGYHGAEQDIELLKLEANKIG-YPVLI 194
G+ IG AI+ D+ K M G+ P G D E + A KIG +P++I
Sbjct: 203 GVELIGAKLGAIKKAEDRELFKDAMKNIGLKTPPSGIGTTLD-ECFDI-AEKIGEFPLII 260
Query: 195 KPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGINTLLVEKYITQPRHIEVQIFGDQ 254
+P GG G I E+F +S+ + A+A+ + +LVEK + + E+++ D
Sbjct: 261 RPAFTLGGTGGGIAYNKEEF-ESICKSGLAASAT---SQVLVEKSLLGWKEYELEVMRDL 316
Query: 255 HGNVIHLYERDCSLQR------RHQKIIEEAPAPNVTAQFRSHIGEAAVSAAKAVGYYSA 308
NV+ + CS++ I APA +T + + + +++ + +G
Sbjct: 317 ADNVVII----CSIENIDPMGVHTGDSITVAPAQTLTDREYQRLRDYSIAIIREIGVECG 372
Query: 309 GT-VEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRIANGECLPLSQEQVP 367
G+ V+F V+ + GE +EMN R+ + G + + +++ G L +Q+P
Sbjct: 373 GSNVQFAVNPVDGEVMIIEMNPRVSRSSALASKATGFPIAKMAAKLSVGYTL----DQIP 428
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 31/189 (16%)
Query: 185 ANKIGYPVLIKPTHGGGGKGMRIVQRPEDFVDSVLSAQREAAASFGIN-TLLVEKYITQP 243
A ++GYPV+++P++ GG+ M IV + DS L E A +LV+KY++
Sbjct: 808 AKEVGYPVVVRPSYVLGGRAMEIV-----YDDSRLITYLENAVQVDPERPVLVDKYLSDA 862
Query: 244 RHIEVQIFGDQHGNV-------------IHLYERDCSLQRRHQKIIEEAPAPNVTAQFRS 290
I+V D +GNV +H + C L P + A
Sbjct: 863 IEIDVDTLTDSYGNVVIGGIMEHIEQAGVHSGDSACML-----------PTQTIPASCLQ 911
Query: 291 HIGEAAVSAAKAVGYYSAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQ 350
I AK + ++ + T SG+ + +E N R P +G L ++
Sbjct: 912 TIRTWTTKLAKKLNVCGLMNCQYAITT-SGDVFLLEANPRASRTVPFVSKAIGHPLAKYA 970
Query: 351 IRIANGECL 359
+ +G+ L
Sbjct: 971 ALVMSGKSL 979
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,487,974
Number of extensions: 521006
Number of successful extensions: 1087
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1077
Number of HSP's successfully gapped: 7
Length of query: 737
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 631
Effective length of database: 8,200,473
Effective search space: 5174498463
Effective search space used: 5174498463
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)