BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0597000 Os12g0597000|AK111887
(225 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26570.2 | chr4:13408608-13409998 REVERSE LENGTH=231 396 e-111
AT5G55990.1 | chr5:22672189-22673579 FORWARD LENGTH=227 394 e-110
AT4G16350.1 | chr4:9242505-9243669 REVERSE LENGTH=227 316 6e-87
AT4G17615.1 | chr4:9817142-9818995 FORWARD LENGTH=214 280 5e-76
AT5G47100.1 | chr5:19129896-19131727 REVERSE LENGTH=214 274 2e-74
AT4G26560.1 | chr4:13406733-13407973 REVERSE LENGTH=215 273 4e-74
AT4G33000.1 | chr4:15924349-15926398 FORWARD LENGTH=257 261 1e-70
AT5G24270.1 | chr5:8238781-8240179 REVERSE LENGTH=223 258 2e-69
AT1G64480.1 | chr1:23948028-23949751 REVERSE LENGTH=215 245 2e-65
AT4G01420.1 | chr4:580038-581518 REVERSE LENGTH=204 190 4e-49
AT3G51850.1 | chr3:19232667-19235526 FORWARD LENGTH=529 51 4e-07
AT5G12480.1 | chr5:4047817-4050035 REVERSE LENGTH=536 50 1e-06
AT5G19450.1 | chr5:6558672-6561471 REVERSE LENGTH=534 49 2e-06
AT5G19360.1 | chr5:6521716-6523780 REVERSE LENGTH=524 48 5e-06
>AT4G26570.2 | chr4:13408608-13409998 REVERSE LENGTH=231
Length = 230
Score = 396 bits (1017), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/230 (84%), Positives = 214/230 (93%), Gaps = 5/230 (2%)
Query: 1 MVQCLDGVRQLLAVVFKCCDLEL-KQPRGLEDPQVLARETVFSVSEVEALYELFKKISSA 59
M QC+DG + + + F+C D+++ KQ GL DP++LARETVFSVSE+EALYELFKKISSA
Sbjct: 1 MSQCIDGFKHVCSSFFRCFDIDIYKQSGGLGDPELLARETVFSVSEIEALYELFKKISSA 60
Query: 60 VIDDGLINKEEFQLALFKTSKKESLFADR----VFDLFDTKHNGILGFDEFARALSVFHP 115
VIDDGLINKEEFQLALFKT+KKESLFADR VFDLFDTKHNGILGF+EFARALSVFHP
Sbjct: 61 VIDDGLINKEEFQLALFKTNKKESLFADRYQSQVFDLFDTKHNGILGFEEFARALSVFHP 120
Query: 116 SAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEAD 175
+AP+++KIDFSFQLYDLKQQG+IERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEAD
Sbjct: 121 NAPIEDKIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEAD 180
Query: 176 TKHDGRIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT 225
TKHDGRIDKEEWR LVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQV+DT
Sbjct: 181 TKHDGRIDKEEWRTLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 230
>AT5G55990.1 | chr5:22672189-22673579 FORWARD LENGTH=227
Length = 226
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/226 (84%), Positives = 210/226 (92%), Gaps = 1/226 (0%)
Query: 1 MVQCLDGVRQLLAVVFKCCDLEL-KQPRGLEDPQVLARETVFSVSEVEALYELFKKISSA 59
M QC+DG++ L V C DL+L KQ GL DP++LAR+TVFSVSE+EALYELFKKISSA
Sbjct: 1 MSQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSA 60
Query: 60 VIDDGLINKEEFQLALFKTSKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPL 119
VIDDGLINKEEFQLALFKT+KKESLFADRVFDLFDTKHNGILGF+EFARALSVFHP+AP+
Sbjct: 61 VIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPI 120
Query: 120 DEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHD 179
D+KI FSFQLYDLKQQG+IERQEVKQMVVATLAESGMNL D +IE IIDKTFEEADTKHD
Sbjct: 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180
Query: 180 GRIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT 225
G+IDKEEWR+LVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQV+DT
Sbjct: 181 GKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVEDT 226
>AT4G16350.1 | chr4:9242505-9243669 REVERSE LENGTH=227
Length = 226
Score = 316 bits (810), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 189/225 (84%), Gaps = 6/225 (2%)
Query: 1 MVQCLDGVRQLLAVVFKCCDLELKQPRGLEDPQVLARETVFSVSEVEALYELFKKISSAV 60
M+QCLDG++ L ++ CCD + P+ ++P+ +AR TVF+V+E+EALYELFK IS
Sbjct: 2 MMQCLDGLKHLALILLTCCDAD--PPKVRQNPKDVARGTVFTVNEIEALYELFKSISK-- 57
Query: 61 IDDGLINKEEFQLALFKTSKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLD 120
+GLI+KE+FQL LFK + SLFADRVFDLFDTK+ GIL F+ FAR+LSVFHP+A +
Sbjct: 58 --NGLIDKEQFQLVLFKMNTTRSLFADRVFDLFDTKNTGILDFEAFARSLSVFHPNAKFE 115
Query: 121 EKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDG 180
+KI+FSF+LYDL QQGYI+RQEVKQMVV TLAESGMNLSD +IESIIDKTFEEADTK DG
Sbjct: 116 DKIEFSFKLYDLNQQGYIKRQEVKQMVVRTLAESGMNLSDHVIESIIDKTFEEADTKLDG 175
Query: 181 RIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT 225
+IDKEEWR+LVLRHPSLL+NM+LQ+LKD+T TFP+FVFH+ V DT
Sbjct: 176 KIDKEEWRSLVLRHPSLLQNMSLQHLKDVTKTFPNFVFHTIVTDT 220
>AT4G17615.1 | chr4:9817142-9818995 FORWARD LENGTH=214
Length = 213
Score = 280 bits (716), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/201 (66%), Positives = 168/201 (83%)
Query: 24 KQPRGLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKES 83
K+ RG EDP LA ET FSVSEVEAL+ELFK ISS+V+DDGLINKEEFQLALFK+ K+E+
Sbjct: 10 KEFRGHEDPVKLASETAFSVSEVEALFELFKSISSSVVDDGLINKEEFQLALFKSRKREN 69
Query: 84 LFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEV 143
+FA+R+FD+FD K G++ F +F R+L+VFHP+A L++KIDF+F+LYD+ GYIERQEV
Sbjct: 70 IFANRIFDMFDVKRKGVIDFGDFVRSLNVFHPNASLEDKIDFTFRLYDMDCTGYIERQEV 129
Query: 144 KQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKNMTL 203
KQM++A L ES M L+DE IE I+DKTFE+AD DG+IDK EW + V ++PSLLK MTL
Sbjct: 130 KQMLIALLCESEMKLADETIEIILDKTFEDADVNQDGKIDKLEWSDFVNKNPSLLKIMTL 189
Query: 204 QYLKDITTTFPSFVFHSQVDD 224
YL+DITTTFPSFVFHS+VD+
Sbjct: 190 PYLRDITTTFPSFVFHSEVDE 210
>AT5G47100.1 | chr5:19129896-19131727 REVERSE LENGTH=214
Length = 213
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 131/195 (67%), Positives = 163/195 (83%)
Query: 30 EDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLFADRV 89
E+P LA ET FSVSEVEALYELFK ISS+V+DDGLINKEEFQLALFK KKE+LFA+R+
Sbjct: 16 ENPVKLASETAFSVSEVEALYELFKSISSSVVDDGLINKEEFQLALFKNRKKENLFANRI 75
Query: 90 FDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVA 149
FDLFD K G++ F +F R+L+VFHP+A L+EK DF+F+LYD+ G+IERQEVKQM++A
Sbjct: 76 FDLFDVKRKGVIDFGDFVRSLNVFHPNASLEEKTDFTFRLYDMDCTGFIERQEVKQMLIA 135
Query: 150 TLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKNMTLQYLKDI 209
L ES M L+D+ IE I+D+TFE+AD DG+IDK EW N V+++PSLLK MTL YL+DI
Sbjct: 136 LLCESEMKLADDTIEMILDQTFEDADVDRDGKIDKTEWSNFVIKNPSLLKIMTLPYLRDI 195
Query: 210 TTTFPSFVFHSQVDD 224
TTTFPSFVF+S+VD+
Sbjct: 196 TTTFPSFVFNSEVDE 210
>AT4G26560.1 | chr4:13406733-13407973 REVERSE LENGTH=215
Length = 214
Score = 273 bits (699), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 161/192 (83%), Gaps = 13/192 (6%)
Query: 47 EALYELFKKISSA--------VIDD-----GLINKEEFQLALFKTSKKESLFADRVFDLF 93
+ALYE+FKK+S V++ G +NKE+F +A+F+T K ESLF++RVFDLF
Sbjct: 23 KALYEVFKKLSGVDCQRNEGNVVEGVTCYYGEMNKEQFHVAIFQTDKNESLFSERVFDLF 82
Query: 94 DTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAE 153
DT H+G+LGF+EFARALSVFHPSAP+D+KID SFQLYDLKQQG+IERQ VKQ+VVATLA
Sbjct: 83 DTNHDGLLGFEEFARALSVFHPSAPIDDKIDLSFQLYDLKQQGFIERQGVKQLVVATLAA 142
Query: 154 SGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKNMTLQYLKDITTTF 213
SGM+ SDEI+ESIIDKTF +ADTKH+G ID+EEW +LV RHP LLKNMTLQYLKDITTTF
Sbjct: 143 SGMSQSDEIVESIIDKTFVQADTKHEGMIDEEEWMDLVFRHPLLLKNMTLQYLKDITTTF 202
Query: 214 PSFVFHSQVDDT 225
PSFV HSQV+DT
Sbjct: 203 PSFVLHSQVEDT 214
>AT4G33000.1 | chr4:15924349-15926398 FORWARD LENGTH=257
Length = 256
Score = 261 bits (668), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 167/216 (77%), Gaps = 2/216 (0%)
Query: 11 LLAVVFKCCDLELKQPRGLE--DPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINK 68
L++ V +C D PR + D + LARE+ FSV+EVEALYELFKK+S ++IDDGLI+K
Sbjct: 41 LVSSVGQCFDCRSTSPRTCQHADLERLARESQFSVNEVEALYELFKKLSCSIIDDGLIHK 100
Query: 69 EEFQLALFKTSKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQ 128
EE +LALF+ E+LF DRVFDLFD K NG++ F+EF ALSVFHP A + EK DF+F+
Sbjct: 101 EELRLALFQAPYGENLFLDRVFDLFDEKKNGVIEFEEFIHALSVFHPYASIQEKTDFAFR 160
Query: 129 LYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWR 188
LYDL+Q G+IER+EV+QMV A L ES M LSDE++ IIDKTF +AD+ DG+I K+EW
Sbjct: 161 LYDLRQTGFIEREEVQQMVSAILLESDMMLSDELLTMIIDKTFADADSDKDGKISKDEWN 220
Query: 189 NLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDD 224
V +HPSLLKNMTL YLKD+TT FPSF+F+++V+D
Sbjct: 221 VYVHKHPSLLKNMTLPYLKDVTTAFPSFIFNTEVED 256
>AT5G24270.1 | chr5:8238781-8240179 REVERSE LENGTH=223
Length = 222
Score = 258 bits (659), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 25 QPRGLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESL 84
+P G EDP++LA T F+V EVEALYELFKK+SS++IDDGLI+KEEFQLALF+ + +L
Sbjct: 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNL 74
Query: 85 FADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVK 144
FADR+FD+FD K NG++ F EF R+L VFHPSAP+ EK+ F+F+LYDL+Q G+IER+E+K
Sbjct: 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELK 134
Query: 145 QMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKNMTLQ 204
+MVVA L ES + LS+++IE ++DK F +AD K+DG+ID +EW++ V +PSL+KNMTL
Sbjct: 135 EMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLP 194
Query: 205 YLKDITTTFPSFV 217
YLKDI TFPSFV
Sbjct: 195 YLKDINRTFPSFV 207
>AT1G64480.1 | chr1:23948028-23949751 REVERSE LENGTH=215
Length = 214
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 163/215 (75%), Gaps = 2/215 (0%)
Query: 11 LLAVVFKCCDLE-LKQPRGLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKE 69
+LA V KC L+ K PRG EDP VLA ET F+V+E+EAL++LFKK+S+++I+DGLI+KE
Sbjct: 1 MLAFV-KCFSLKRAKHPRGYEDPHVLASETPFTVNEIEALHDLFKKLSTSIINDGLIHKE 59
Query: 70 EFQLALFKTSKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQL 129
EF LALF+ ++LFADRVF +FD K NG++ F EF R+LS+FHP P EK F F+L
Sbjct: 60 EFLLALFRNGSMQNLFADRVFYMFDRKRNGVIEFGEFVRSLSIFHPYTPEHEKSAFMFKL 119
Query: 130 YDLKQQGYIERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRN 189
+DL G+IE E+K+MV A L E+ + LS+E IE+I+++T E DT DG+ID+EEW+
Sbjct: 120 FDLHGTGFIEPHELKKMVGALLGETDLELSEESIEAIVEQTMLEVDTNKDGKIDEEEWKE 179
Query: 190 LVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDD 224
LV ++PS+LKNMTL YLK++T FPSFV S+V+D
Sbjct: 180 LVAKNPSILKNMTLPYLKEVTLAFPSFVLDSEVED 214
>AT4G01420.1 | chr4:580038-581518 REVERSE LENGTH=204
Length = 203
Score = 190 bits (483), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 19 CDLELKQPRGLEDPQVLARETVFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKT 78
C +L + R ED +LA +T FS +EVE L+ LF K++S + +D L+ KE+FQ L K
Sbjct: 5 CSKQL-EGRRQEDISLLASQTFFSEAEVEVLHGLFIKLTSCLSNDNLLTKEKFQFILIKN 63
Query: 79 SKKESLFADRVFDLFDTKHNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYI 138
+KK SL A+R+F LFD +++G + F EF L++FHP++ +K F+F+LYD ++ G+I
Sbjct: 64 TKKRSLSAERIFGLFDMRNDGAIDFGEFVHTLNIFHPNSSPRDKAIFAFRLYDTRETGFI 123
Query: 139 ERQEVKQMVVATLAESGMNLSDEIIESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLL 198
E +EVK+M++ L ES + LS+ II+SI+ KTFEEAD K DG ID EEW N V +P L
Sbjct: 124 EPEEVKEMIIDVLEESELMLSESIIDSIVSKTFEEADWKKDGIIDLEEWENFVATYPLTL 183
Query: 199 KNMTLQYLKDITTTFPSFV 217
KNMT+ +LKDI FP+F+
Sbjct: 184 KNMTIPFLKDIPRIFPTFL 202
>AT3G51850.1 | chr3:19232667-19235526 FORWARD LENGTH=529
Length = 528
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 41 FSVSEVEALYELFKKISSAVIDDGLINKEEFQLAL--FKTSKKESLFADRVFDLFDTKHN 98
S EVE + +F K+ + +DG+++ EE + L F T ES + + DTK
Sbjct: 352 LSTEEVEDIKVMFNKMDTD--NDGIVSIEELKAGLRDFSTQLAESEV-QMLIEAVDTKGK 408
Query: 99 GILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNL 158
G L + EF A+S+ DE + +F +D GYI QE+ L E G
Sbjct: 409 GTLDYGEFV-AVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQEL----CDALKEDG--- 460
Query: 159 SDEIIESIIDKTFEEADTKHDGRIDKEE----------WRNLVLRHPS--LLKNMTLQYL 206
D+ ++ + + F+E DT DGRI EE WR RH S +++++ +
Sbjct: 461 GDDCVD-VANDIFQEVDTDKDGRISYEEFAAMMKTGTDWRK-ASRHYSRGRFNSLSIKLM 518
Query: 207 KD 208
KD
Sbjct: 519 KD 520
>AT5G12480.1 | chr5:4047817-4050035 REVERSE LENGTH=536
Length = 535
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 41 FSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLFADR----VFDLFDTK 96
SV E + E F+ + V G IN EE + L K ++ AD + + D
Sbjct: 357 LSVEEAAGIKEAFEMMD--VNKRGKINLEELKYGLQKAGQQ---IADTDLQILMEATDVD 411
Query: 97 HNGILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGM 156
+G L + EF A+SV DE + +F +D Q GYIE E+++ + L +
Sbjct: 412 GDGTLNYSEFV-AVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTS- 469
Query: 157 NLSDEIIESIIDKTFEEADTKHDGRIDKEEW 187
S+E+I +I+ ++ DT DGRI EE+
Sbjct: 470 --SEEVIAAIM----QDVDTDKDGRISYEEF 494
>AT5G19450.1 | chr5:6558672-6561471 REVERSE LENGTH=534
Length = 533
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 41 FSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLFADR--VFDLFDTKHN 98
SV EV + E F+ + S G IN EE + L K +++ D + + D +
Sbjct: 355 LSVEEVAGIKEAFEMMDSK--KTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGD 412
Query: 99 GILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNL 158
G L + EF A+SV DE + +F +D Q YIE +E+++ L
Sbjct: 413 GTLNYGEFV-AVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREA-----------L 460
Query: 159 SDEI---IESIIDKTFEEADTKHDGRIDKEEWRNLVLRHPSLLKNMTLQYLKD 208
+DE+ E ++ ++ DT DGRI EE+ + ++ + + + QY ++
Sbjct: 461 NDEVDTNSEEVVAAIMQDVDTDKDGRISYEEFAAM-MKAGTDWRKASRQYSRE 512
>AT5G19360.1 | chr5:6521716-6523780 REVERSE LENGTH=524
Length = 523
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 40 VFSVSEVEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLF-ADRVFDLFDTKHN 98
S E+ L E+FK + + + G I EE + L K + S + ++ + D N
Sbjct: 365 CLSEEEIMGLKEMFKGMDTD--NSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGN 422
Query: 99 GILGFDEFARALSVFHPSAPLDEKIDFSFQLYDLKQQGYIERQEVKQMVVATLAESGMNL 158
G + + EF A ++ +E + +FQ +D GYI +E++Q L E GMN
Sbjct: 423 GTIDYGEFI-AATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQ----ALREFGMND 477
Query: 159 SDEIIESIIDKTFEEADTKHDGRIDKEEW 187
+I E I E D +DGRI+ EE+
Sbjct: 478 GRDIKEII-----SEVDGDNDGRINYEEF 501
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,619,248
Number of extensions: 186351
Number of successful extensions: 785
Number of sequences better than 1.0e-05: 34
Number of HSP's gapped: 790
Number of HSP's successfully gapped: 34
Length of query: 225
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 130
Effective length of database: 8,502,049
Effective search space: 1105266370
Effective search space used: 1105266370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)