BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0572800 Os12g0572800|Os12g0572800
(1233 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G28880.1 | chr3:10892435-10895895 FORWARD LENGTH=773 239 5e-63
AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241 64 4e-10
AT2G33410.1 | chr2:14156085-14157435 FORWARD LENGTH=405 60 9e-09
AT1G58470.1 | chr1:21727374-21728539 FORWARD LENGTH=361 59 2e-08
AT4G14300.1 | chr4:8231179-8232785 FORWARD LENGTH=412 57 7e-08
AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457 57 8e-08
AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436 55 2e-07
AT4G26650.1 | chr4:13445552-13447592 FORWARD LENGTH=456 54 4e-07
AT1G17640.1 | chr1:6067394-6069098 REVERSE LENGTH=370 54 8e-07
AT5G55550.3 | chr5:22502135-22503658 REVERSE LENGTH=461 52 1e-06
AT3G13224.2 | chr3:4254848-4256621 FORWARD LENGTH=359 52 2e-06
AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316 52 2e-06
AT2G17390.1 | chr2:7555870-7557743 FORWARD LENGTH=345 52 2e-06
AT5G40490.1 | chr5:16225483-16227423 FORWARD LENGTH=424 50 6e-06
AT4G35450.5 | chr4:16839862-16841759 FORWARD LENGTH=351 50 6e-06
AT2G21140.1 | chr2:9060868-9062035 REVERSE LENGTH=322 50 6e-06
AT2G31820.1 | chr2:13530350-13532562 FORWARD LENGTH=663 50 7e-06
>AT3G28880.1 | chr3:10892435-10895895 FORWARD LENGTH=773
Length = 772
Score = 239 bits (611), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 225/399 (56%), Gaps = 29/399 (7%)
Query: 57 DDTALLLAAVGSFRKEAMG---RLRKGSDASRMLDQEMSTRLLHLACKHDAVQCARLLLE 113
DD A L + + + + + R+ G DA +++ +LL C +D++ CA ++
Sbjct: 62 DDYAFLESGLKDNKSQFISYAKRILVGEDAESERIEDL--KLLTACCSYDSINCASSIIN 119
Query: 114 GGHGITASPVDARDQLTRTPLQVAAEAHSARCIELLLSKNARTDLKLVDGRPLVALEIAL 173
G G D + L AAE+H+ C+E+LL + ARTD++ D R L+ LE++L
Sbjct: 120 GDVGSVPYINDICSDTGLSLLHTAAESHAPLCVEMLLKRRARTDMRSKDERALIPLELSL 179
Query: 174 LSRRAQVKWSLDNSIEDLLSSLQEKDLNAVRLLAEKTREVGEVAYRYAMEGRVTVLAMLL 233
+ R L+ L +KDL V+LLAEKT+EV VAY YA G + L LL
Sbjct: 180 SNVR-------------LIVLLGDKDLTVVKLLAEKTKEVDVVAYAYAKAGEIVSLTALL 226
Query: 234 LVAEEKI-SAPVSVVIE------GVRTKKSIYYSIVDEALSIGDAPARDSNERRKALLSE 286
+VA KI A V++ + R +K+IY +++ EAL +E+R LL E
Sbjct: 227 IVASGKIREATVALRDDDDDDSVAKRERKTIYEAVIQEALRSNSLTQSVCSEKRMVLLRE 286
Query: 287 IQLLNQFGAALWRDRNIDKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHW 346
I+LL FGAA++ + ++DK++ PL+ + GD V ++ + + DVNE + EGNT L
Sbjct: 287 IELLQLFGAAVFSE-SVDKQT-SPLISIVQAGDEAVLELFINTNFDVNEKNIEGNTVLQC 344
Query: 347 CLSGSS--STQEPRIVWLLLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCV 404
L GSS Q+ RI+ LL+ +GARV Q NKLGL+ VH AAA GN L+ LL D V
Sbjct: 345 SLKGSSVPHNQQTRIMNLLIAHGARVNQKNKLGLSAVHFAAANGNLSTLEILLAANPDLV 404
Query: 405 DTPSKTKETPLFLAVKNGSLDCVKLLLRSGASTKVQNLR 443
+ + KETPLF AVKN LDCV+LLLR GA T++ NLR
Sbjct: 405 NMKTVIKETPLFFAVKNNHLDCVELLLRCGAITEIHNLR 443
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 712 LPSWFFIFRKWLPGFLADATERL-GDRYPLSSLKGDFRAICRMELDHGTLGYPKLSDFMR 770
+P+W F WLP +L D + G YPLSS K DFRA+ M+LDH +L +PK DF++
Sbjct: 473 VPTWLKTFVTWLPLYLRDTSANWKGAGYPLSSFKADFRAVFGMDLDHTSLDFPKHIDFVK 532
Query: 771 SLPGICRMCVVPVGS-GPATHMVLLPPVSR 799
P +C+M VVP+G G ATH V+LP S+
Sbjct: 533 YFPRLCQMKVVPIGKLGAATHWVMLPTKSK 562
>AT2G03430.1 | chr2:1036192-1037536 REVERSE LENGTH=241
Length = 240
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 304 DKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLL 363
D PL AA +G+ + ++LL DVN + G TALH+ ++S I LL
Sbjct: 80 DDEGWAPLHSAASIGNAELVEVLLTRGADVNAKNNGGRTALHY----AASKGRLEIAQLL 135
Query: 364 LKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGS 423
L +GA++ +K+G TP+H AA+ G + + L+ + +D K +T L +V
Sbjct: 136 LTHGAKINITDKVGCTPLHRAASVGKLEVCEFLIEEGAE-IDATDKMGQTALMHSVICDD 194
Query: 424 LDCVKLLLRSGASTKVQN 441
LL+R GA V++
Sbjct: 195 KQVAFLLIRHGADVDVED 212
>AT2G33410.1 | chr2:14156085-14157435 FORWARD LENGTH=405
Length = 404
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 581 TRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREE--D 638
T+KIFVGGLPP++ ++ +F +GPV +AV++ + R RGFGFV F E+ D
Sbjct: 109 TKKIFVGGLPPALTSDEFRAYFET-YGPVSDAVIMIDQTTQR--PRGFGFVSFDSEDSVD 165
Query: 639 VISAKETHHVYMLGKRVEVKDAVARGSLP 667
++ K H + GK+VEVK A+ + + P
Sbjct: 166 LVLHKTFHDLN--GKQVEVKRALPKDANP 192
>AT1G58470.1 | chr1:21727374-21728539 FORWARD LENGTH=361
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 579 DYTR-KIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREE 637
DY R K+FVGG+ E L ++F+ +G V EAVV ++ + RGFGFV+F +
Sbjct: 2 DYDRYKLFVGGIAKETSEEALKQYFS-RYGAVLEAVVAKEKVTGK--PRGFGFVRFANDC 58
Query: 638 DVISA-KETHHVYMLGKRVEVKDAVARGSL 666
DV+ A ++TH ++LGK V+V+ A+ + L
Sbjct: 59 DVVKALRDTH--FILGKPVDVRKAIRKHEL 86
>AT4G14300.1 | chr4:8231179-8232785 FORWARD LENGTH=412
Length = 411
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 578 HDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREE 637
++ T+KIFVGGLPP++ E ++F +GPV + ++ + +R RGFGFV F E+
Sbjct: 106 YNKTKKIFVGGLPPTLTDEEFRQYFEV-YGPVTDVAIMYDQATNR--PRGFGFVSFDSED 162
Query: 638 DVISAKETHHVYMLGKRVEVKDAVARGSLP 667
V S + GK+VEVK A+ + + P
Sbjct: 163 AVDSVLHKTFHDLSGKQVEVKRALPKDANP 192
>AT3G04710.1 | chr3:1278229-1280942 FORWARD LENGTH=457
Length = 456
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 21/195 (10%)
Query: 304 DKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLL 363
D+ PL+ AA+ G + K LL D N A G TALH ++ T E ++ L
Sbjct: 86 DETGDTPLVHAARQGQIETVKYLLEQGADPNIASELGATALHH----AAGTGEIELLKEL 141
Query: 364 LKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGS 423
L G V ++ G TP+ AA A++ LL H + + ++ TPL AV GS
Sbjct: 142 LSRGVPVDSESESG-TPLIWAAGHDQKNAVEVLLEHNAN-PNAETEDNITPLLSAVAAGS 199
Query: 424 LDCVKLLLRSGASTKVQNLRWVIFGFKKNMLLFDDLMHLPSFDPLTL-----NRK----Q 474
L C++LL+++GA V G + + D+ +L + L N+K
Sbjct: 200 LSCLELLVKAGAKAN------VFAGGATPLHIAADIGNLELINCLLKAGADPNQKDEEGN 253
Query: 475 RPIDVATSQDMRFIL 489
RP++VA ++D R ++
Sbjct: 254 RPLEVAAARDNRKVV 268
>AT5G66055.1 | chr5:26417425-26419234 REVERSE LENGTH=436
Length = 435
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 310 PLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGAR 369
PL A G+ + LL ++D+N D G T LH + G I LL+ A
Sbjct: 263 PLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQA----ITNYLLRESAN 318
Query: 370 VFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKL 429
F + G T +H A + ++ LLL+ D ++ + TPL +AV+ D VKL
Sbjct: 319 PFVLDDEGATLMHYAVQTASAPTIKLLLLYNAD-INAQDRDGWTPLHVAVQARRSDIVKL 377
Query: 430 LLRSGASTKVQN 441
LL GA +V+N
Sbjct: 378 LLIKGADIEVKN 389
>AT4G26650.1 | chr4:13445552-13447592 FORWARD LENGTH=456
Length = 455
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 581 TRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREE--D 638
T+KIFVGGLP S+ +F +FG + + VV+ R RGFGF+ F EE D
Sbjct: 121 TKKIFVGGLPSSITEAEFKNYFD-QFGTIADVVVMYDHNTQR--PRGFGFITFDSEESVD 177
Query: 639 VISAKETHHVYMLGKRVEVKDAVARGSLPAEIQKIAPFR 677
++ K H + GK VEVK AV P E+ P R
Sbjct: 178 MVLHKTFHE--LNGKMVEVKRAV-----PKELSSTTPNR 209
>AT1G17640.1 | chr1:6067394-6069098 REVERSE LENGTH=370
Length = 369
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 581 TRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREEDVI 640
TRKIFVGGLPP + + L +F +E ++ G +SRGFGFV F+ E+ V
Sbjct: 156 TRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTG---RSRGFGFVTFQTEDSVD 212
Query: 641 SAKETHHVYMLG-KRVEVKDA 660
V+ LG K+VE+K A
Sbjct: 213 RLFSDGKVHELGDKQVEIKRA 233
>AT5G55550.3 | chr5:22502135-22503658 REVERSE LENGTH=461
Length = 460
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 581 TRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREE--D 638
T+KIFVGGLP S+ E +F +FG + + VV+ R RGFGF+ F ++ D
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFD-QFGTIADVVVMYDHNTQR--PRGFGFITFDSDDAVD 165
Query: 639 VISAKETHHVYMLGKRVEVKDAVARGSLPAEIQKIAPFR 677
+ K H + GK VEVK AV P EI ++ R
Sbjct: 166 RVLHKTFHE--LNGKLVEVKRAV-----PKEISPVSNIR 197
>AT3G13224.2 | chr3:4254848-4256621 FORWARD LENGTH=359
Length = 358
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 581 TRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREEDVI 640
T+KIFVGG+P +V + L +FF A++G V E V IR + +SRGFGFV F EE V
Sbjct: 108 TKKIFVGGIPSTVTEDELKDFF-AKYGNVVEHQV--IRDHETNRSRGFGFVIFDSEEVVD 164
Query: 641 S-AKETHHVYMLGKRVEVKDAVARGSL 666
+ + + M +VE+K A + SL
Sbjct: 165 ELLSKGNMIDMADTQVEIKKAEPKKSL 191
>AT5G40160.1 | chr5:16062726-16064301 REVERSE LENGTH=316
Length = 315
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 9/135 (6%)
Query: 303 IDKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWL 362
I +S PL A + + L+ +D+++ D + TALH + G ++ ++
Sbjct: 148 ISTKSWKPLQTLALSMQIQLMDNLIENGLDIDDVDKDNQTALHKAIIG----KKEAVISH 203
Query: 363 LLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKE--TPLFLAVK 420
LL+ GA ++ G P+H A G ALQ++ L + VD E TPL +AV+
Sbjct: 204 LLRKGANPHLQDRDGAAPIHYAVQVG---ALQTVKLLFKYNVDVNVADNEGWTPLHIAVQ 260
Query: 421 NGSLDCVKLLLRSGA 435
+ + D K+LL +GA
Sbjct: 261 SRNRDITKILLTNGA 275
>AT2G17390.1 | chr2:7555870-7557743 FORWARD LENGTH=345
Length = 344
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 313 KAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHW-CLSGSSSTQEPRIVWLLLKNGARVF 371
+ A +GDV K L + +E D EG TALH+ C G E R +LL GA
Sbjct: 226 QTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYG-----EVRCAQVLLDAGANAN 280
Query: 372 QGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLL 430
+K TP+H AA G + + SLLL V + + P+ +A N LD VKLL
Sbjct: 281 AIDKNKNTPLHYAAGYGRKECV-SLLLENGAAVTQQNMDNKNPIDVARLNNQLDVVKLL 338
>AT5G40490.1 | chr5:16225483-16227423 FORWARD LENGTH=424
Length = 423
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 569 VPRPNHWPKHDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGF 628
+PR + T+KIFVGG+P SV + EFF +FG ++E + +R +SRGF
Sbjct: 117 IPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFF-MQFGELKEHQI--MRDHSTGRSRGF 173
Query: 629 GFVKFKREE--DVISAKETHHVYMLGKRVEVKDA 660
GFV ++ E+ D + AK + + + G +VE+K A
Sbjct: 174 GFVTYESEDMVDHLLAK-GNRIELSGTQVEIKKA 206
>AT4G35450.5 | chr4:16839862-16841759 FORWARD LENGTH=351
Length = 350
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 313 KAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHW-CLSGSSSTQEPRIVWLLLKNGARVF 371
+ A +GDV K L + +E D EG TALH+ C G E + +L+ GA V
Sbjct: 232 QTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYG-----ELKCAQVLIDAGASVN 286
Query: 372 QGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLL 430
+K TP+H AA G K SLLL V + ++TP+ +A N L+ VKLL
Sbjct: 287 AVDKNKNTPLHYAAGYGR-KECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLL 344
>AT2G21140.1 | chr2:9060868-9062035 REVERSE LENGTH=322
Length = 321
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 936 KPIVIEPVPTRKPSVIEPVPTRKPMAIEPVVP----TRKPIVIEPVPTRKPIVIEPV--- 988
KPI PVP KP PVP KP + P P KPI PVP KP V+ P
Sbjct: 206 KPIYKPPVPIYKP----PVPIYKPPVVIPKKPCPPKIHKPIYKPPVPIYKPPVVIPKKTF 261
Query: 989 -PTRKPIVTEPLPTRKPTVIEP 1009
P KPI P+P KP P
Sbjct: 262 PPLHKPIYKHPVPIYKPIFKPP 283
>AT2G31820.1 | chr2:13530350-13532562 FORWARD LENGTH=663
Length = 662
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 311 LLKAAKVGDVNVTKMLLMGDVDVN-EADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGAR 369
L AA++G V V K L+ D + D +G TALH + G Q IV L+K
Sbjct: 296 LHSAARMGHVEVVKSLIGKDPSIGFRTDKKGQTALHMAVKG----QNDGIVVELVKPDVA 351
Query: 370 VF--QGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCV 427
V + NK G TP+H A KG K ++ L+ ++ +K +TPL ++ K G+ + V
Sbjct: 352 VLSVEDNK-GNTPLHIATNKGRIKIVRCLVSFEGINLNPINKAGDTPLDVSEKIGNAELV 410
Query: 428 KLLLRSGAST 437
+L +GA+T
Sbjct: 411 SVLKEAGAAT 420
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 26,717,861
Number of extensions: 1210135
Number of successful extensions: 5194
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 5065
Number of HSP's successfully gapped: 42
Length of query: 1233
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1123
Effective length of database: 8,090,809
Effective search space: 9085978507
Effective search space used: 9085978507
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)